BLASTX nr result

ID: Zingiber23_contig00049026 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00049026
         (281 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK81066.1| elongated petiolule 1, partial [Glycine max]            57   3e-06
ref|XP_003527004.1| PREDICTED: protein LATERAL ORGAN BOUNDARIES-...    57   3e-06
ref|XP_002521459.1| LOB domain-containing protein, putative [Ric...    56   4e-06
gb|EOY02489.1| Lateral organ boundaries domain family protein [T...    55   7e-06

>gb|AFK81066.1| elongated petiolule 1, partial [Glycine max]
          Length = 185

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 31/69 (44%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
 Frame = -3

Query: 279 PVYGCVAVISLLQRQLDALHSELDATNADLLRYXXXXXXXXXANVP--IPISSSFAPIAG 106
           PVYGCV  IS LQRQ+  L  ELD+ NADLLRY          +VP  +P  S  A    
Sbjct: 81  PVYGCVGAISFLQRQVQRLQKELDSANADLLRYACNDMPPPSLSVPPQMPQRSFIARFGN 140

Query: 105 QTGGAGGNY 79
           ++   GG Y
Sbjct: 141 ESASGGGFY 149


>ref|XP_003527004.1| PREDICTED: protein LATERAL ORGAN BOUNDARIES-like isoform X1
           [Glycine max] gi|571461134|ref|XP_006581908.1|
           PREDICTED: protein LATERAL ORGAN BOUNDARIES-like isoform
           X2 [Glycine max] gi|571461136|ref|XP_006581909.1|
           PREDICTED: protein LATERAL ORGAN BOUNDARIES-like isoform
           X3 [Glycine max]
          Length = 185

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 31/69 (44%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
 Frame = -3

Query: 279 PVYGCVAVISLLQRQLDALHSELDATNADLLRYXXXXXXXXXANVP--IPISSSFAPIAG 106
           PVYGCV  IS LQRQ+  L  ELD+ NADLLRY          +VP  +P  S  A    
Sbjct: 81  PVYGCVGAISFLQRQVQRLQKELDSANADLLRYACNDMPPPSLSVPPQMPQRSFIARFGN 140

Query: 105 QTGGAGGNY 79
           ++   GG Y
Sbjct: 141 ESASGGGFY 149


>ref|XP_002521459.1| LOB domain-containing protein, putative [Ricinus communis]
           gi|223539358|gb|EEF40949.1| LOB domain-containing
           protein, putative [Ricinus communis]
          Length = 175

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 35/81 (43%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
 Frame = -3

Query: 279 PVYGCVAVISLLQRQLDALHSELDATNADLLRYXXXXXXXXXANVPIPISSSFAPIAGQT 100
           PVYGCV  IS+LQRQ+  L  ELDATNADL+RY            P   SSS +    ++
Sbjct: 83  PVYGCVGAISVLQRQVIRLQKELDATNADLIRYACNDQMPPPP--PTITSSSSSQFGRRS 140

Query: 99  G-GAGGNYTDDDLFHDPDQVN 40
           G G+G +Y  +  F+ P   N
Sbjct: 141 GHGSGVSYDQNSGFYYPPPWN 161


>gb|EOY02489.1| Lateral organ boundaries domain family protein [Theobroma cacao]
          Length = 172

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 33/83 (39%), Positives = 45/83 (54%), Gaps = 2/83 (2%)
 Frame = -3

Query: 279 PVYGCVAVISLLQRQLDALHSELDATNADLLRYXXXXXXXXXANVPIPISSSFAPIAGQT 100
           PVYGCV  IS+LQRQ+  L  ELDATNADL+R+           +P    S +    G  
Sbjct: 81  PVYGCVGAISVLQRQVMRLQRELDATNADLIRF-------ACNEMPPASISQYGRRTGHH 133

Query: 99  GGAGG--NYTDDDLFHDPDQVNA 37
           GGA G  ++  +  ++ P Q N+
Sbjct: 134 GGAAGAASFNQNSGYYYPSQWNS 156


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