BLASTX nr result
ID: Zingiber23_contig00049012
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00049012
(430 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004493379.1| PREDICTED: pentatricopeptide repeat-containi... 97 2e-18
gb|ESW18386.1| hypothetical protein PHAVU_006G036400g [Phaseolus... 95 9e-18
ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat... 94 2e-17
gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygr... 94 2e-17
emb|CBI28351.3| unnamed protein product [Vitis vinifera] 94 2e-17
ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containi... 94 2e-17
ref|XP_004250798.1| PREDICTED: pentatricopeptide repeat-containi... 93 3e-17
ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containi... 93 3e-17
ref|XP_004296063.1| PREDICTED: pentatricopeptide repeat-containi... 93 4e-17
ref|NP_567948.1| pentatricopeptide repeat-containing protein [Ar... 93 4e-17
ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Sela... 93 4e-17
ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata] g... 93 4e-17
ref|XP_006343488.1| PREDICTED: pentatricopeptide repeat-containi... 92 6e-17
gb|EOX98269.1| Tetratricopeptide repeat (TPR)-like superfamily p... 92 6e-17
ref|NP_193101.2| pentatricopeptide repeat-containing protein [Ar... 92 6e-17
ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat... 92 6e-17
emb|CBI36364.3| unnamed protein product [Vitis vinifera] 92 6e-17
emb|CAB36829.1| putative protein [Arabidopsis thaliana] gi|72680... 92 6e-17
ref|XP_006400719.1| hypothetical protein EUTSA_v10012749mg [Eutr... 92 7e-17
ref|XP_006400718.1| hypothetical protein EUTSA_v10012749mg [Eutr... 92 7e-17
>ref|XP_004493379.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Cicer arietinum]
Length = 824
Score = 97.1 bits (240), Expect = 2e-18
Identities = 39/55 (70%), Positives = 46/55 (83%)
Frame = +2
Query: 14 PTRCPITVFKNLRVCNDCHSFTKMVSKVTGRDIIVRDSNRFHHFRGGRCSCDDYW 178
P R PI +FKNLRVC DCH+ TK +S++T RDI+VRDSNRFHHF+ G CSCDDYW
Sbjct: 770 PPRSPIRIFKNLRVCGDCHNATKYISRITERDIVVRDSNRFHHFKDGICSCDDYW 824
>gb|ESW18386.1| hypothetical protein PHAVU_006G036400g [Phaseolus vulgaris]
Length = 816
Score = 95.1 bits (235), Expect = 9e-18
Identities = 39/55 (70%), Positives = 45/55 (81%)
Frame = +2
Query: 14 PTRCPITVFKNLRVCNDCHSFTKMVSKVTGRDIIVRDSNRFHHFRGGRCSCDDYW 178
P + PI +FKNLRVC DCH+ TK +SK+T RDIIVRDSNRFHHF+ G CSC DYW
Sbjct: 762 PPKSPIRIFKNLRVCGDCHNATKYISKITERDIIVRDSNRFHHFKDGGCSCGDYW 816
>ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g13230, mitochondrial-like [Cucumis sativus]
gi|449515059|ref|XP_004164567.1| PREDICTED: putative
pentatricopeptide repeat-containing protein At5g13230,
mitochondrial-like [Cucumis sativus]
Length = 721
Score = 94.0 bits (232), Expect = 2e-17
Identities = 37/56 (66%), Positives = 43/56 (76%)
Frame = +2
Query: 11 LPTRCPITVFKNLRVCNDCHSFTKMVSKVTGRDIIVRDSNRFHHFRGGRCSCDDYW 178
+P CPI + KNLR+C DCHS K++SK+ GRDIIVRD NRFHHF G CSC DYW
Sbjct: 666 MPAGCPIRIIKNLRICVDCHSVIKLISKIVGRDIIVRDMNRFHHFENGSCSCADYW 721
>gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
Length = 837
Score = 93.6 bits (231), Expect = 2e-17
Identities = 38/56 (67%), Positives = 46/56 (82%)
Frame = +2
Query: 11 LPTRCPITVFKNLRVCNDCHSFTKMVSKVTGRDIIVRDSNRFHHFRGGRCSCDDYW 178
LP+ PI +FKNLRVC DCHS +K +SKVTGR+II RD++RFHHF+ G CSC DYW
Sbjct: 782 LPSGAPIRIFKNLRVCGDCHSASKFISKVTGREIIARDASRFHHFKNGVCSCGDYW 837
>emb|CBI28351.3| unnamed protein product [Vitis vinifera]
Length = 770
Score = 93.6 bits (231), Expect = 2e-17
Identities = 37/55 (67%), Positives = 44/55 (80%)
Frame = +2
Query: 14 PTRCPITVFKNLRVCNDCHSFTKMVSKVTGRDIIVRDSNRFHHFRGGRCSCDDYW 178
P PI + KNLRVC DCH+ K++SK+ GRDI+VRDSNRFHHF+GG CSC DYW
Sbjct: 716 PPGTPIQIVKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGSCSCGDYW 770
>ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g27610-like [Vitis vinifera]
Length = 866
Score = 93.6 bits (231), Expect = 2e-17
Identities = 37/55 (67%), Positives = 44/55 (80%)
Frame = +2
Query: 14 PTRCPITVFKNLRVCNDCHSFTKMVSKVTGRDIIVRDSNRFHHFRGGRCSCDDYW 178
P PI + KNLRVC DCH+ K++SK+ GRDI+VRDSNRFHHF+GG CSC DYW
Sbjct: 812 PPGTPIQIVKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGSCSCGDYW 866
>ref|XP_004250798.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990-like
[Solanum lycopersicum]
Length = 911
Score = 93.2 bits (230), Expect = 3e-17
Identities = 36/55 (65%), Positives = 46/55 (83%)
Frame = +2
Query: 14 PTRCPITVFKNLRVCNDCHSFTKMVSKVTGRDIIVRDSNRFHHFRGGRCSCDDYW 178
P + P+ ++KNLRVC DCH+ TK++SK+T R+IIVRDSNRFHHF+ G CSC DYW
Sbjct: 857 PPKSPLRIYKNLRVCGDCHNVTKLISKITEREIIVRDSNRFHHFKNGVCSCGDYW 911
>ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like isoform X1 [Glycine max]
gi|571544149|ref|XP_006602168.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g33990-like isoform X2 [Glycine max]
gi|571544153|ref|XP_006602169.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g33990-like isoform X3 [Glycine max]
gi|571544157|ref|XP_006602170.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g33990-like isoform X4 [Glycine max]
gi|571544163|ref|XP_006602171.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g33990-like isoform X5 [Glycine max]
Length = 824
Score = 93.2 bits (230), Expect = 3e-17
Identities = 38/55 (69%), Positives = 45/55 (81%)
Frame = +2
Query: 14 PTRCPITVFKNLRVCNDCHSFTKMVSKVTGRDIIVRDSNRFHHFRGGRCSCDDYW 178
P + PI +FKNLRVC DCH+ TK +SK+T R+IIVRDSNRFHHF+ G CSC DYW
Sbjct: 770 PPKSPIRIFKNLRVCGDCHNATKYISKITEREIIVRDSNRFHHFKDGICSCGDYW 824
>ref|XP_004296063.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like [Fragaria vesca subsp. vesca]
Length = 867
Score = 92.8 bits (229), Expect = 4e-17
Identities = 37/55 (67%), Positives = 45/55 (81%)
Frame = +2
Query: 14 PTRCPITVFKNLRVCNDCHSFTKMVSKVTGRDIIVRDSNRFHHFRGGRCSCDDYW 178
P + PI +FKNLRVC DCH+ TK++S +T R+IIVRDSNRFHHF+ G CSC DYW
Sbjct: 813 PPKTPIRIFKNLRVCGDCHTVTKLISVITEREIIVRDSNRFHHFKDGTCSCGDYW 867
>ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635622|sp|O81767.2|PP348_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
gi|332660906|gb|AEE86306.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 823
Score = 92.8 bits (229), Expect = 4e-17
Identities = 38/55 (69%), Positives = 44/55 (80%)
Frame = +2
Query: 14 PTRCPITVFKNLRVCNDCHSFTKMVSKVTGRDIIVRDSNRFHHFRGGRCSCDDYW 178
P + I +FKNLRVC DCHS TK +SK+T R+IIVRDSNRFHHF+ G CSC DYW
Sbjct: 769 PAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
>ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
gi|300154888|gb|EFJ21522.1| hypothetical protein
SELMODRAFT_107192 [Selaginella moellendorffii]
Length = 652
Score = 92.8 bits (229), Expect = 4e-17
Identities = 36/55 (65%), Positives = 47/55 (85%)
Frame = +2
Query: 14 PTRCPITVFKNLRVCNDCHSFTKMVSKVTGRDIIVRDSNRFHHFRGGRCSCDDYW 178
P P+ + KNLRVC+DCH+ TK++SKVTGR+I+VRD+NRFHHF+ G CSC+DYW
Sbjct: 598 PPGAPLRIVKNLRVCSDCHAATKVISKVTGREILVRDTNRFHHFQNGMCSCNDYW 652
>ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata
subsp. lyrata]
Length = 824
Score = 92.8 bits (229), Expect = 4e-17
Identities = 38/55 (69%), Positives = 44/55 (80%)
Frame = +2
Query: 14 PTRCPITVFKNLRVCNDCHSFTKMVSKVTGRDIIVRDSNRFHHFRGGRCSCDDYW 178
P + I +FKNLRVC DCHS TK +SK+T R+IIVRDSNRFHHF+ G CSC DYW
Sbjct: 770 PAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 824
>ref|XP_006343488.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g33990-like isoform X1 [Solanum tuberosum]
gi|565353132|ref|XP_006343489.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g33990-like isoform X2 [Solanum tuberosum]
gi|565353134|ref|XP_006343490.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g33990-like isoform X3 [Solanum tuberosum]
gi|565353136|ref|XP_006343491.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g33990-like isoform X4 [Solanum tuberosum]
Length = 831
Score = 92.4 bits (228), Expect = 6e-17
Identities = 36/55 (65%), Positives = 46/55 (83%)
Frame = +2
Query: 14 PTRCPITVFKNLRVCNDCHSFTKMVSKVTGRDIIVRDSNRFHHFRGGRCSCDDYW 178
P + P+ ++KNLRVC DCH+ TK++SK+T R+IIVRDSNRFHHF+ G CSC DYW
Sbjct: 777 PPKNPLRIYKNLRVCGDCHNVTKLISKITEREIIVRDSNRFHHFKNGVCSCGDYW 831
>gb|EOX98269.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 820
Score = 92.4 bits (228), Expect = 6e-17
Identities = 37/55 (67%), Positives = 45/55 (81%)
Frame = +2
Query: 14 PTRCPITVFKNLRVCNDCHSFTKMVSKVTGRDIIVRDSNRFHHFRGGRCSCDDYW 178
P + PI +FKNLRVC DCH+ TK +S++T R+IIVRDSNRFHHF+ G CSC DYW
Sbjct: 766 PPKSPIRIFKNLRVCGDCHNATKFISQITDREIIVRDSNRFHHFKDGICSCGDYW 820
>ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g13650 gi|332657909|gb|AEE83309.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 1064
Score = 92.4 bits (228), Expect = 6e-17
Identities = 39/56 (69%), Positives = 44/56 (78%)
Frame = +2
Query: 11 LPTRCPITVFKNLRVCNDCHSFTKMVSKVTGRDIIVRDSNRFHHFRGGRCSCDDYW 178
LP PI V KNLRVCNDCH++ K VSKV+ R+IIVRD+ RFHHF GG CSC DYW
Sbjct: 1009 LPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
>ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g09950-like [Vitis vinifera]
Length = 1088
Score = 92.4 bits (228), Expect = 6e-17
Identities = 37/56 (66%), Positives = 44/56 (78%)
Frame = +2
Query: 11 LPTRCPITVFKNLRVCNDCHSFTKMVSKVTGRDIIVRDSNRFHHFRGGRCSCDDYW 178
LP + I VFKNLR+C DCH+ TK +SK+TGR II RD+NRFHHF G+CSC DYW
Sbjct: 1033 LPKKSTIRVFKNLRICGDCHTATKFISKITGRRIIARDTNRFHHFENGKCSCGDYW 1088
>emb|CBI36364.3| unnamed protein product [Vitis vinifera]
Length = 832
Score = 92.4 bits (228), Expect = 6e-17
Identities = 37/56 (66%), Positives = 44/56 (78%)
Frame = +2
Query: 11 LPTRCPITVFKNLRVCNDCHSFTKMVSKVTGRDIIVRDSNRFHHFRGGRCSCDDYW 178
LP + I VFKNLR+C DCH+ TK +SK+TGR II RD+NRFHHF G+CSC DYW
Sbjct: 777 LPKKSTIRVFKNLRICGDCHTATKFISKITGRRIIARDTNRFHHFENGKCSCGDYW 832
>emb|CAB36829.1| putative protein [Arabidopsis thaliana] gi|7268069|emb|CAB78407.1|
putative protein [Arabidopsis thaliana]
Length = 1024
Score = 92.4 bits (228), Expect = 6e-17
Identities = 39/56 (69%), Positives = 44/56 (78%)
Frame = +2
Query: 11 LPTRCPITVFKNLRVCNDCHSFTKMVSKVTGRDIIVRDSNRFHHFRGGRCSCDDYW 178
LP PI V KNLRVCNDCH++ K VSKV+ R+IIVRD+ RFHHF GG CSC DYW
Sbjct: 969 LPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1024
>ref|XP_006400719.1| hypothetical protein EUTSA_v10012749mg [Eutrema salsugineum]
gi|557101809|gb|ESQ42172.1| hypothetical protein
EUTSA_v10012749mg [Eutrema salsugineum]
Length = 766
Score = 92.0 bits (227), Expect = 7e-17
Identities = 37/55 (67%), Positives = 46/55 (83%)
Frame = +2
Query: 14 PTRCPITVFKNLRVCNDCHSFTKMVSKVTGRDIIVRDSNRFHHFRGGRCSCDDYW 178
P + I +FKNLRVC+DCHS TK++S++T R+IIVRDSNRFHHF+ G CSC DYW
Sbjct: 712 PPKTTIQIFKNLRVCSDCHSVTKLISRITEREIIVRDSNRFHHFKDGVCSCGDYW 766
>ref|XP_006400718.1| hypothetical protein EUTSA_v10012749mg [Eutrema salsugineum]
gi|557101808|gb|ESQ42171.1| hypothetical protein
EUTSA_v10012749mg [Eutrema salsugineum]
Length = 683
Score = 92.0 bits (227), Expect = 7e-17
Identities = 37/55 (67%), Positives = 46/55 (83%)
Frame = +2
Query: 14 PTRCPITVFKNLRVCNDCHSFTKMVSKVTGRDIIVRDSNRFHHFRGGRCSCDDYW 178
P + I +FKNLRVC+DCHS TK++S++T R+IIVRDSNRFHHF+ G CSC DYW
Sbjct: 629 PPKTTIQIFKNLRVCSDCHSVTKLISRITEREIIVRDSNRFHHFKDGVCSCGDYW 683