BLASTX nr result
ID: Zingiber23_contig00048988
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00048988
(360 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAK06737.1| predicted protein [Hordeum vulgare subsp. vulgare] 144 2e-32
ref|XP_004982736.1| PREDICTED: LOW QUALITY PROTEIN: probable DNA... 139 5e-31
ref|XP_003574126.1| PREDICTED: DNA-directed RNA polymerase I sub... 134 1e-29
ref|XP_004163996.1| PREDICTED: probable DNA-directed RNA polymer... 128 9e-28
ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I sub... 127 2e-27
ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I sub... 125 8e-27
ref|XP_006594369.1| PREDICTED: DNA-directed RNA polymerase I sub... 124 1e-26
ref|XP_006366498.1| PREDICTED: probable DNA-directed RNA polymer... 124 1e-26
ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I sub... 124 1e-26
ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymer... 124 2e-26
gb|ESW05690.1| hypothetical protein PHAVU_011G201300g [Phaseolus... 122 5e-26
ref|XP_004486057.1| PREDICTED: probable DNA-directed RNA polymer... 119 3e-25
gb|EOY19647.1| Nuclear RNA polymerase A2 isoform 2 [Theobroma ca... 117 2e-24
tpg|DAA49470.1| TPA: hypothetical protein ZEAMMB73_824600 [Zea m... 107 2e-21
tpg|DAA49469.1| TPA: hypothetical protein ZEAMMB73_824600 [Zea m... 107 2e-21
ref|XP_001773955.1| predicted protein [Physcomitrella patens] gi... 105 6e-21
emb|CAN62043.1| hypothetical protein VITISV_038847 [Vitis vinifera] 104 1e-20
ref|XP_006464288.1| PREDICTED: probable DNA-directed RNA polymer... 102 5e-20
ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymer... 102 5e-20
ref|NP_564341.2| nuclear RNA polymerase A2 [Arabidopsis thaliana... 102 5e-20
>dbj|BAK06737.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 978
Score = 144 bits (362), Expect = 2e-32
Identities = 66/113 (58%), Positives = 82/113 (72%)
Frame = -3
Query: 340 DYEALRDLFRPHVESFDYFLDEGLQKIFFAIRPVEIVDRVTGVKLRISLEGPQVLPPTKD 161
DY LR+L+RPH+ESFDYFLDEGL K+ +IRP+EI + LR+SLE VLPP KD
Sbjct: 20 DYATLRELYRPHIESFDYFLDEGLDKMLLSIRPMEITHPSSNTTLRMSLEKGHVLPPMKD 79
Query: 160 GRLNEPLYPHECRQARTTYKGDFKALLCFQYDDGVIVRESINLGHLPIMLKSK 2
GRL +PLYP ECRQ R +Y G+FK FQ++DG +R++ N G LPIML SK
Sbjct: 80 GRLGQPLYPQECRQGRISYSGEFKVEAVFQFNDGAPIRQTFNFGQLPIMLMSK 132
>ref|XP_004982736.1| PREDICTED: LOW QUALITY PROTEIN: probable DNA-directed RNA
polymerase I subunit RPA2-like [Setaria italica]
Length = 1172
Score = 139 bits (349), Expect = 5e-31
Identities = 70/119 (58%), Positives = 85/119 (71%), Gaps = 1/119 (0%)
Frame = -3
Query: 355 SKSKPDYEALRDLFRPHVESFDYFLDEGLQKIFFAIRPVEIVDRVTGVKLRISLEGPQVL 176
S + DY AL++LFRPHVESFD FLD GL ++ IRP+EI D + L+I+LE QVL
Sbjct: 9 SPAGADYAALKELFRPHVESFDSFLDVGLDEMLRGIRPMEIKDPNSSAILKITLEKGQVL 68
Query: 175 PPTKDGRLNEPLYPHECRQARTTYKGDFKALLCFQ-YDDGVIVRESINLGHLPIMLKSK 2
PP +DGRL PLYP ECRQARTTY G+FK +C Q +DG +R + N GHLPIML SK
Sbjct: 69 PPMRDGRLGVPLYPQECRQARTTYHGEFKVDVCLQCNEDGAQIRHTFNFGHLPIMLMSK 127
>ref|XP_003574126.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Brachypodium
distachyon]
Length = 1181
Score = 134 bits (337), Expect = 1e-29
Identities = 62/113 (54%), Positives = 83/113 (73%)
Frame = -3
Query: 340 DYEALRDLFRPHVESFDYFLDEGLQKIFFAIRPVEIVDRVTGVKLRISLEGPQVLPPTKD 161
+Y LR+L+RPH+ESFDYFLDEGL K+ +IRP++I + LRISLE +LPP +D
Sbjct: 19 EYATLRELYRPHIESFDYFLDEGLDKMLLSIRPMDISHPSSSDTLRISLEKGHLLPPLRD 78
Query: 160 GRLNEPLYPHECRQARTTYKGDFKALLCFQYDDGVIVRESINLGHLPIMLKSK 2
R+ +PLYP ECRQAR +Y G+FK FQ+++G +R++ N GHLPIML SK
Sbjct: 79 VRMAKPLYPQECRQARISYSGEFKVDTLFQFNNGAPMRQTFNFGHLPIMLMSK 131
>ref|XP_004163996.1| PREDICTED: probable DNA-directed RNA polymerase I subunit
RPA2-like, partial [Cucumis sativus]
Length = 948
Score = 128 bits (321), Expect = 9e-28
Identities = 62/116 (53%), Positives = 81/116 (69%), Gaps = 3/116 (2%)
Frame = -3
Query: 340 DYEALRDLFRPHVESFDYFLDEGLQKIFFAIRPVEIVDRVTGVKLRISLEGPQVLPPTKD 161
DYEALR+LFR H+ESFD+ +D GL+ + +I+PVEI D T KLRI L P++ PP K+
Sbjct: 10 DYEALRELFRHHIESFDHLVDAGLETLMNSIKPVEIYDSFTNKKLRIWLGKPELYPPQKE 69
Query: 160 GRL---NEPLYPHECRQARTTYKGDFKALLCFQYDDGVIVRESINLGHLPIMLKSK 2
L E L P+ECRQA+ +Y G F A +CFQYD+ ++RE +N G PIMLKSK
Sbjct: 70 RNLRTIREALLPYECRQAKISYTGKFMADVCFQYDEKAVIREKLNFGQFPIMLKSK 125
>ref|XP_004146776.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Cucumis
sativus]
Length = 1173
Score = 127 bits (319), Expect = 2e-27
Identities = 62/116 (53%), Positives = 80/116 (68%), Gaps = 3/116 (2%)
Frame = -3
Query: 340 DYEALRDLFRPHVESFDYFLDEGLQKIFFAIRPVEIVDRVTGVKLRISLEGPQVLPPTKD 161
DYEALR+LFR H+ESFD+ +D GL+ + +I+PVEI D T KLRI L P++ PP K+
Sbjct: 10 DYEALRELFRHHIESFDHLVDAGLETLMNSIKPVEIYDSFTNKKLRIWLGKPELYPPQKE 69
Query: 160 GRL---NEPLYPHECRQARTTYKGDFKALLCFQYDDGVIVRESINLGHLPIMLKSK 2
L E L P+ECRQA+ +Y G F A +CFQYD+ ++RE N G PIMLKSK
Sbjct: 70 RNLRTIREALLPYECRQAKISYTGKFMADVCFQYDEKAVIREKFNFGQFPIMLKSK 125
>ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Solanum
lycopersicum]
Length = 1184
Score = 125 bits (313), Expect = 8e-27
Identities = 57/119 (47%), Positives = 80/119 (67%), Gaps = 3/119 (2%)
Frame = -3
Query: 349 SKPDYEALRDLFRPHVESFDYFLDEGLQKIFFAIRPVEIVDRVTGVKLRISLEGPQVLPP 170
++ DY AL++LF H+ESFDY +D GL+ + I+P+EIVD + +KLRI P++ PP
Sbjct: 21 AEKDYSALKELFSHHIESFDYMVDNGLETMLLNIKPIEIVDSFSSLKLRIWFGKPELFPP 80
Query: 169 TKD---GRLNEPLYPHECRQARTTYKGDFKALLCFQYDDGVIVRESINLGHLPIMLKSK 2
K+ +++ LYP ECRQA+ +Y G F +CFQY DG ++RE N G PIMLKSK
Sbjct: 81 QKERASKAMHDALYPFECRQAKISYSGKFLVDICFQYGDGAVIREKFNFGQFPIMLKSK 139
>ref|XP_006594369.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform
X2 [Glycine max]
Length = 1151
Score = 124 bits (312), Expect = 1e-26
Identities = 60/119 (50%), Positives = 80/119 (67%), Gaps = 3/119 (2%)
Frame = -3
Query: 349 SKPDYEALRDLFRPHVESFDYFLDEGLQKIFFAIRPVEIVDRVTGVKLRISLEGPQVLPP 170
S PD+EALR+LF+ H+ESFDY +D GL + I+PVE+ D T KLRI L+ P + PP
Sbjct: 7 SVPDFEALRELFKHHIESFDYMVDAGLDTMLGHIKPVEVFDDFTSTKLRIWLDNPVLYPP 66
Query: 169 TKD---GRLNEPLYPHECRQARTTYKGDFKALLCFQYDDGVIVRESINLGHLPIMLKSK 2
K+ + E L P ECRQA+ +Y G +CFQY+DG I+RE++N G PIML+SK
Sbjct: 67 QKERISRTMREALLPFECRQAKISYSGKITIDVCFQYNDGPIIRENVNFGQFPIMLQSK 125
>ref|XP_006366498.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
[Solanum tuberosum]
Length = 1179
Score = 124 bits (312), Expect = 1e-26
Identities = 57/119 (47%), Positives = 80/119 (67%), Gaps = 3/119 (2%)
Frame = -3
Query: 349 SKPDYEALRDLFRPHVESFDYFLDEGLQKIFFAIRPVEIVDRVTGVKLRISLEGPQVLPP 170
++ DY AL++LF H+ESFDY +D GL+ + I+P+EIVD + +KLRI P++ PP
Sbjct: 16 AEKDYSALKELFSHHIESFDYMVDNGLETMLLNIKPIEIVDSFSSLKLRIWFGKPELFPP 75
Query: 169 TKD---GRLNEPLYPHECRQARTTYKGDFKALLCFQYDDGVIVRESINLGHLPIMLKSK 2
K+ +++ LYP ECRQA+ +Y G F +CFQY DG ++RE N G PIMLKSK
Sbjct: 76 QKERASKTMHDALYPFECRQAKLSYTGKFLVDICFQYGDGAVIREKFNFGQFPIMLKSK 134
>ref|XP_003542805.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like isoform
X1 [Glycine max]
Length = 1175
Score = 124 bits (312), Expect = 1e-26
Identities = 60/119 (50%), Positives = 80/119 (67%), Gaps = 3/119 (2%)
Frame = -3
Query: 349 SKPDYEALRDLFRPHVESFDYFLDEGLQKIFFAIRPVEIVDRVTGVKLRISLEGPQVLPP 170
S PD+EALR+LF+ H+ESFDY +D GL + I+PVE+ D T KLRI L+ P + PP
Sbjct: 7 SVPDFEALRELFKHHIESFDYMVDAGLDTMLGHIKPVEVFDDFTSTKLRIWLDNPVLYPP 66
Query: 169 TKD---GRLNEPLYPHECRQARTTYKGDFKALLCFQYDDGVIVRESINLGHLPIMLKSK 2
K+ + E L P ECRQA+ +Y G +CFQY+DG I+RE++N G PIML+SK
Sbjct: 67 QKERISRTMREALLPFECRQAKISYSGKITIDVCFQYNDGPIIRENVNFGQFPIMLQSK 125
>ref|XP_003550091.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
isoform X1 [Glycine max]
Length = 1175
Score = 124 bits (310), Expect = 2e-26
Identities = 60/119 (50%), Positives = 80/119 (67%), Gaps = 3/119 (2%)
Frame = -3
Query: 349 SKPDYEALRDLFRPHVESFDYFLDEGLQKIFFAIRPVEIVDRVTGVKLRISLEGPQVLPP 170
S PD+EALR+LF+ H+ESFDY D GL+ + I+P+E+ D T KLRI L+ P + PP
Sbjct: 7 SIPDFEALRELFKHHIESFDYMADAGLETMLRHIKPIEVFDDFTSTKLRIWLDNPVLYPP 66
Query: 169 TKD---GRLNEPLYPHECRQARTTYKGDFKALLCFQYDDGVIVRESINLGHLPIMLKSK 2
K+ + E L P ECRQA+ +Y G +CFQY+DG I+RE+IN G PIML+SK
Sbjct: 67 QKERISRTMREALLPFECRQAKISYAGKITIDVCFQYNDGPIIRENINFGQFPIMLQSK 125
>gb|ESW05690.1| hypothetical protein PHAVU_011G201300g [Phaseolus vulgaris]
Length = 1180
Score = 122 bits (306), Expect = 5e-26
Identities = 58/119 (48%), Positives = 80/119 (67%), Gaps = 3/119 (2%)
Frame = -3
Query: 349 SKPDYEALRDLFRPHVESFDYFLDEGLQKIFFAIRPVEIVDRVTGVKLRISLEGPQVLPP 170
S PD+EALR+LF+ H+ESFD+ + GL+ I+P+E++D T KLRI LE P V PP
Sbjct: 7 SVPDFEALRELFKHHIESFDHMVKAGLETTLLHIKPIEVLDDFTTTKLRIWLENPVVYPP 66
Query: 169 TKD---GRLNEPLYPHECRQARTTYKGDFKALLCFQYDDGVIVRESINLGHLPIMLKSK 2
K+ + E L P ECRQA+ +Y G +CFQY+DG ++RE++N G PIML+SK
Sbjct: 67 QKERISKTMREALLPFECRQAKISYAGKITIDVCFQYNDGPVIRENVNFGQFPIMLQSK 125
>ref|XP_004486057.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
isoform X1 [Cicer arietinum]
gi|502078798|ref|XP_004486058.1| PREDICTED: probable
DNA-directed RNA polymerase I subunit RPA2-like isoform
X2 [Cicer arietinum]
Length = 1177
Score = 119 bits (299), Expect = 3e-25
Identities = 55/116 (47%), Positives = 79/116 (68%), Gaps = 3/116 (2%)
Frame = -3
Query: 340 DYEALRDLFRPHVESFDYFLDEGLQKIFFAIRPVEIVDRVTGVKLRISLEGPQVLPPTKD 161
+++ALRDL +PH+ESFD+ +D GL+ +F I+P+E+ L+IS++ P++ P K+
Sbjct: 16 NFDALRDLLKPHIESFDHMIDAGLKTMFIGIKPLEVPHPTQPTTLKISMDNPKIFEPQKE 75
Query: 160 GRLNEP---LYPHECRQARTTYKGDFKALLCFQYDDGVIVRESINLGHLPIMLKSK 2
++ LYP ECRQA+ +Y G F A LCFQYD+G IVRE N G PIML+SK
Sbjct: 76 RGFSKSRNILYPFECRQAKISYTGTFTAELCFQYDNGPIVREKFNFGQFPIMLQSK 131
>gb|EOY19647.1| Nuclear RNA polymerase A2 isoform 2 [Theobroma cacao]
Length = 1180
Score = 117 bits (293), Expect = 2e-24
Identities = 57/116 (49%), Positives = 76/116 (65%), Gaps = 3/116 (2%)
Frame = -3
Query: 340 DYEALRDLFRPHVESFDYFLDEGLQKIFFAIRPVEIVDRVTGVKLRISLEGPQVLPPTKD 161
+ E L++LF+ H+ESFDY +DEGL + ++PV+I D + LRI L+ P+V PP KD
Sbjct: 17 ELEELKELFKHHIESFDYMIDEGLDLMLKRVKPVQIFDSSSNKTLRIWLDHPEVYPPQKD 76
Query: 160 GRLNEP---LYPHECRQARTTYKGDFKALLCFQYDDGVIVRESINLGHLPIMLKSK 2
LYP ECRQA+ +Y G F +CFQ+D GV+VRE +N G PIMLKSK
Sbjct: 77 RSSKTSAGALYPFECRQAKISYTGSFHIDVCFQWDGGVVVREKLNFGEFPIMLKSK 132
>tpg|DAA49470.1| TPA: hypothetical protein ZEAMMB73_824600 [Zea mays]
Length = 1162
Score = 107 bits (267), Expect = 2e-21
Identities = 57/115 (49%), Positives = 72/115 (62%), Gaps = 2/115 (1%)
Frame = -3
Query: 340 DYEALRDLFRPHVESFDYFLDEGLQKIFFAIRPVEIVDRVTGVKLRISLEGPQVLPPTKD 161
DY ALR+LFRPHVESFDYFLD+GL ++ +IRP+ VL P +
Sbjct: 17 DYSALRELFRPHVESFDYFLDKGLDEMIESIRPMG-----------------HVLSPMRG 59
Query: 160 GRLNE-PLYPHE-CRQARTTYKGDFKALLCFQYDDGVIVRESINLGHLPIMLKSK 2
R P+YP E CRQAR +Y G+FK +CFQY++G +R + N GHLPIML SK
Sbjct: 60 ARPGVLPIYPQEQCRQARISYHGEFKVEVCFQYNEGAQIRHTFNFGHLPIMLMSK 114
>tpg|DAA49469.1| TPA: hypothetical protein ZEAMMB73_824600 [Zea mays]
Length = 1128
Score = 107 bits (267), Expect = 2e-21
Identities = 57/115 (49%), Positives = 72/115 (62%), Gaps = 2/115 (1%)
Frame = -3
Query: 340 DYEALRDLFRPHVESFDYFLDEGLQKIFFAIRPVEIVDRVTGVKLRISLEGPQVLPPTKD 161
DY ALR+LFRPHVESFDYFLD+GL ++ +IRP+ VL P +
Sbjct: 17 DYSALRELFRPHVESFDYFLDKGLDEMIESIRPMG-----------------HVLSPMRG 59
Query: 160 GRLNE-PLYPHE-CRQARTTYKGDFKALLCFQYDDGVIVRESINLGHLPIMLKSK 2
R P+YP E CRQAR +Y G+FK +CFQY++G +R + N GHLPIML SK
Sbjct: 60 ARPGVLPIYPQEQCRQARISYHGEFKVEVCFQYNEGAQIRHTFNFGHLPIMLMSK 114
>ref|XP_001773955.1| predicted protein [Physcomitrella patens]
gi|162674799|gb|EDQ61303.1| predicted protein
[Physcomitrella patens]
Length = 1199
Score = 105 bits (262), Expect = 6e-21
Identities = 50/115 (43%), Positives = 77/115 (66%), Gaps = 3/115 (2%)
Frame = -3
Query: 340 DYEALRDLFRPHVESFDYFLDEGLQKIFFAIRPVEIVDRVTGVKLRISLEGPQVLPPTKD 161
D +L DL +PH ESFDYF++ GL++ ++P+E+ ++G LR+ +E P V PP KD
Sbjct: 38 DCSSLYDLTKPHTESFDYFVERGLEEAVRRLQPIELKHPISGTSLRLWVEKPNVSPPMKD 97
Query: 160 ---GRLNEPLYPHECRQARTTYKGDFKALLCFQYDDGVIVRESINLGHLPIMLKS 5
L++ L P ECR A TY+G F A +C Q+++GV+VR +I+ G +P+M+KS
Sbjct: 98 LGSQALDQRLLPSECRLAGLTYRGIFTADICMQWNNGVVVRHNISYGKMPVMVKS 152
>emb|CAN62043.1| hypothetical protein VITISV_038847 [Vitis vinifera]
Length = 416
Score = 104 bits (259), Expect = 1e-20
Identities = 53/122 (43%), Positives = 78/122 (63%), Gaps = 8/122 (6%)
Frame = -3
Query: 343 PDYEALRDLFRPHVESFDYFLDEGLQKIFFAIRPVE---IVDRVTGVKLRISL--EGPQV 179
PDYE LR+LF+ H++SFD+ ++ GL+ + +++PVE I RI+L P++
Sbjct: 6 PDYEPLRELFQHHIDSFDHLVEFGLETLLMSVKPVESLFITHNGVFFLTRIALWFGQPEL 65
Query: 178 LPPTKDGR---LNEPLYPHECRQARTTYKGDFKALLCFQYDDGVIVRESINLGHLPIMLK 8
PP K+ + + LYP ECRQA+ +Y G A +CFQY +GV++RE NLG P+MLK
Sbjct: 66 YPPQKERSARTMRDALYPFECRQAKISYSGKLLADVCFQYGNGVVIREKFNLGQFPMMLK 125
Query: 7 SK 2
SK
Sbjct: 126 SK 127
>ref|XP_006464288.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
isoform X2 [Citrus sinensis]
Length = 954
Score = 102 bits (254), Expect = 5e-20
Identities = 53/122 (43%), Positives = 75/122 (61%), Gaps = 5/122 (4%)
Frame = -3
Query: 352 KSKPDYEALRDLFRPHVESFDYFLDEGLQKIFFAIRPVEIVDRVTGVKLRISLEGPQVLP 173
K D+E LR+L R H+ESFDY LDEGL ++F ++ V + D T +L+IS+ P++ P
Sbjct: 4 KKSADFEPLRELVRHHIESFDYMLDEGLSEMFDHVKTVFVHDSFTNKRLKISVGNPEIFP 63
Query: 172 PTKD---GRLNEPLYPHECRQARTTYKGDFKALLCFQYDD--GVIVRESINLGHLPIMLK 8
P K+ L + L P ECRQA+ +Y G A + FQY D +VRE N G P+MLK
Sbjct: 64 PQKEQGSKTLRDALLPFECRQAKISYTGKLMADVEFQYLDAGSPVVRERFNFGQFPVMLK 123
Query: 7 SK 2
++
Sbjct: 124 TR 125
>ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
isoform X1 [Citrus sinensis]
Length = 1175
Score = 102 bits (254), Expect = 5e-20
Identities = 53/122 (43%), Positives = 75/122 (61%), Gaps = 5/122 (4%)
Frame = -3
Query: 352 KSKPDYEALRDLFRPHVESFDYFLDEGLQKIFFAIRPVEIVDRVTGVKLRISLEGPQVLP 173
K D+E LR+L R H+ESFDY LDEGL ++F ++ V + D T +L+IS+ P++ P
Sbjct: 4 KKSADFEPLRELVRHHIESFDYMLDEGLSEMFDHVKTVFVHDSFTNKRLKISVGNPEIFP 63
Query: 172 PTKD---GRLNEPLYPHECRQARTTYKGDFKALLCFQYDD--GVIVRESINLGHLPIMLK 8
P K+ L + L P ECRQA+ +Y G A + FQY D +VRE N G P+MLK
Sbjct: 64 PQKEQGSKTLRDALLPFECRQAKISYTGKLMADVEFQYLDAGSPVVRERFNFGQFPVMLK 123
Query: 7 SK 2
++
Sbjct: 124 TR 125
>ref|NP_564341.2| nuclear RNA polymerase A2 [Arabidopsis thaliana]
gi|332193031|gb|AEE31152.1| nuclear RNA polymerase A2
[Arabidopsis thaliana]
Length = 1178
Score = 102 bits (254), Expect = 5e-20
Identities = 53/117 (45%), Positives = 71/117 (60%), Gaps = 4/117 (3%)
Frame = -3
Query: 340 DYEALRDLFRPHVESFDYFLDEGLQKIFFAIRPVEIVDRVTGVKLRISLEGPQVLPPTKD 161
D++ L +L H+ESFDY +GL +F I+PV + D T +L I LE P V P K+
Sbjct: 15 DFKELHNLVTHHIESFDYMTLKGLDVMFNRIKPVSVYDPNTENELSIWLENPLVFAPQKE 74
Query: 160 G----RLNEPLYPHECRQARTTYKGDFKALLCFQYDDGVIVRESINLGHLPIMLKSK 2
EPL P ECRQA+ +Y G F A +CF+Y+DGV+VR+ + G PIML SK
Sbjct: 75 SFKSTSRKEPLLPFECRQAKISYTGTFMADVCFKYNDGVVVRDKFDFGQFPIMLMSK 131