BLASTX nr result
ID: Zingiber23_contig00048918
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00048918
(302 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004985346.1| PREDICTED: F-box protein SNE-like [Setaria i... 91 2e-16
ref|NP_001049264.1| Os03g0196500 [Oryza sativa Japonica Group] g... 89 5e-16
tpg|DAA43985.1| TPA: F-box protein GID2 [Zea mays] 88 1e-15
ref|XP_002465701.1| hypothetical protein SORBIDRAFT_01g044060 [S... 88 1e-15
ref|NP_001147675.1| F-box protein GID2 [Zea mays] gi|195613018|g... 88 1e-15
gb|ACG27214.1| F-box protein GID2 [Zea mays] 88 1e-15
ref|XP_003561948.1| PREDICTED: F-box protein SNE-like [Brachypod... 86 4e-15
gb|ACN33386.1| unknown [Zea mays] gi|413956711|gb|AFW89360.1| F-... 83 4e-14
ref|NP_001150591.1| F-box protein GID2 [Zea mays] gi|195640404|g... 83 4e-14
ref|XP_006469747.1| PREDICTED: F-box protein SNE-like, partial [... 77 3e-12
ref|XP_006447769.1| hypothetical protein CICLE_v10016961mg [Citr... 77 3e-12
ref|XP_004140002.1| PREDICTED: F-box protein SNE-like [Cucumis s... 77 3e-12
gb|EMJ16301.1| hypothetical protein PRUPE_ppa012743mg [Prunus pe... 76 4e-12
ref|XP_006362999.1| PREDICTED: F-box protein SNE-like [Solanum t... 76 5e-12
ref|XP_004243874.1| PREDICTED: F-box protein SNE-like [Solanum l... 76 5e-12
gb|EXB98294.1| hypothetical protein L484_014280 [Morus notabilis] 75 1e-11
emb|CBI28427.3| unnamed protein product [Vitis vinifera] 74 2e-11
ref|XP_002530225.1| F-box protein SNE, putative [Ricinus communi... 74 2e-11
ref|XP_002269904.1| PREDICTED: F-box protein SNE [Vitis vinifera... 74 2e-11
ref|XP_002321191.1| hypothetical protein POPTR_0014s16360g [Popu... 74 2e-11
>ref|XP_004985346.1| PREDICTED: F-box protein SNE-like [Setaria italica]
Length = 199
Score = 90.5 bits (223), Expect = 2e-16
Identities = 46/80 (57%), Positives = 52/80 (65%), Gaps = 4/80 (5%)
Frame = +3
Query: 75 FPINDNADLLAEVLGRLDGRSLAVAGCVCRLWNALARREAVWEVVCYRH----XXXXXXX 242
+ INDNADLLAE+LGRLDGRSLA A CVCRLW A+ARR+AVWE +C RH
Sbjct: 41 YNINDNADLLAEILGRLDGRSLAAAACVCRLWAAVARRDAVWEALCLRHVGPAPPAAAAA 100
Query: 243 XXXXXXXXXXXLGGYRRLHR 302
LGGYRRL+R
Sbjct: 101 AGPATRAVVAALGGYRRLYR 120
>ref|NP_001049264.1| Os03g0196500 [Oryza sativa Japonica Group]
gi|108706661|gb|ABF94456.1| F-box domain containing
protein [Oryza sativa Japonica Group]
gi|113547735|dbj|BAF11178.1| Os03g0196500 [Oryza sativa
Japonica Group] gi|125542761|gb|EAY88900.1| hypothetical
protein OsI_10379 [Oryza sativa Indica Group]
Length = 178
Score = 89.4 bits (220), Expect = 5e-16
Identities = 45/77 (58%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Frame = +3
Query: 75 FPINDNADLLAEVLGRLDGRSLAVAGCVCRLWNALARREAVWEVVCYRH-XXXXXXXXXX 251
+ INDNADLLAE+L RLDGRSLA A CVCRLW A+ARR+AVWE +C RH
Sbjct: 32 YNINDNADLLAEILARLDGRSLAAAACVCRLWAAVARRDAVWEALCLRHVGPASGPTAGP 91
Query: 252 XXXXXXXXLGGYRRLHR 302
LGGYRRL+R
Sbjct: 92 ATRAVVAALGGYRRLYR 108
>tpg|DAA43985.1| TPA: F-box protein GID2 [Zea mays]
Length = 178
Score = 88.2 bits (217), Expect = 1e-15
Identities = 44/78 (56%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Frame = +3
Query: 75 FPINDNADLLAEVLGRLDGRSLAVAGCVCRLWNALARREAVWEVVCYRH--XXXXXXXXX 248
+ INDNAD+LAE+L RLDGRSLA A CVCRLW A+ARR+AVWE +C RH
Sbjct: 25 YNINDNADILAEILARLDGRSLAAAACVCRLWAAVARRDAVWEALCLRHVGPAPPAAAAG 84
Query: 249 XXXXXXXXXLGGYRRLHR 302
LGGYRRL+R
Sbjct: 85 PATRAVVAALGGYRRLYR 102
>ref|XP_002465701.1| hypothetical protein SORBIDRAFT_01g044060 [Sorghum bicolor]
gi|241919555|gb|EER92699.1| hypothetical protein
SORBIDRAFT_01g044060 [Sorghum bicolor]
Length = 203
Score = 88.2 bits (217), Expect = 1e-15
Identities = 44/78 (56%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Frame = +3
Query: 75 FPINDNADLLAEVLGRLDGRSLAVAGCVCRLWNALARREAVWEVVCYRH--XXXXXXXXX 248
+ INDNAD+LAE+L RLDGRSLA A CVCRLW A+ARR+AVWE +C RH
Sbjct: 50 YNINDNADILAEILSRLDGRSLAAAACVCRLWAAVARRDAVWEALCLRHVGPPAPPAAAG 109
Query: 249 XXXXXXXXXLGGYRRLHR 302
LGGYRRL+R
Sbjct: 110 PATRAVVAALGGYRRLYR 127
>ref|NP_001147675.1| F-box protein GID2 [Zea mays] gi|195613018|gb|ACG28339.1| F-box
protein GID2 [Zea mays]
Length = 182
Score = 88.2 bits (217), Expect = 1e-15
Identities = 44/78 (56%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Frame = +3
Query: 75 FPINDNADLLAEVLGRLDGRSLAVAGCVCRLWNALARREAVWEVVCYRH--XXXXXXXXX 248
+ INDNAD+LAE+L RLDGRSLA A CVCRLW A+ARR+AVWE +C RH
Sbjct: 29 YNINDNADILAEILARLDGRSLAAAACVCRLWAAVARRDAVWEALCLRHVGPAPPAAAAG 88
Query: 249 XXXXXXXXXLGGYRRLHR 302
LGGYRRL+R
Sbjct: 89 PATRAVVAALGGYRRLYR 106
>gb|ACG27214.1| F-box protein GID2 [Zea mays]
Length = 184
Score = 88.2 bits (217), Expect = 1e-15
Identities = 44/78 (56%), Positives = 51/78 (65%), Gaps = 2/78 (2%)
Frame = +3
Query: 75 FPINDNADLLAEVLGRLDGRSLAVAGCVCRLWNALARREAVWEVVCYRH--XXXXXXXXX 248
+ INDNAD+LAE+L RLDGRSLA A CVCRLW A+ARR+AVWE +C RH
Sbjct: 30 YNINDNADILAEILARLDGRSLAAAACVCRLWAAVARRDAVWEALCLRHVGPAPPAAAAG 89
Query: 249 XXXXXXXXXLGGYRRLHR 302
LGGYRRL+R
Sbjct: 90 PATRAVVAALGGYRRLYR 107
>ref|XP_003561948.1| PREDICTED: F-box protein SNE-like [Brachypodium distachyon]
Length = 176
Score = 86.3 bits (212), Expect = 4e-15
Identities = 41/76 (53%), Positives = 50/76 (65%)
Frame = +3
Query: 75 FPINDNADLLAEVLGRLDGRSLAVAGCVCRLWNALARREAVWEVVCYRHXXXXXXXXXXX 254
+ INDNAD+L+E+L RLDGRSLA A VCRLW A++RR+AVWE +C RH
Sbjct: 33 YNINDNADILSEILSRLDGRSLAAAAGVCRLWAAVSRRDAVWEALCLRHVGPTARSGLGA 92
Query: 255 XXXXXXXLGGYRRLHR 302
LGGYRRL+R
Sbjct: 93 TRAVVGALGGYRRLYR 108
>gb|ACN33386.1| unknown [Zea mays] gi|413956711|gb|AFW89360.1| F-box protein GID2
[Zea mays]
Length = 180
Score = 82.8 bits (203), Expect = 4e-14
Identities = 44/82 (53%), Positives = 50/82 (60%), Gaps = 6/82 (7%)
Frame = +3
Query: 75 FPINDNADLLAEVLGRLDGRSLAVAGCVCRLWNALARREAVWEVVCYRH------XXXXX 236
+ INDNADLLAE+L RLDGRSLA A VCRLW A+ARR+AVWE +C RH
Sbjct: 25 YNINDNADLLAEILARLDGRSLAAAAGVCRLWAAVARRDAVWEALCLRHVGPAPSAAAAA 84
Query: 237 XXXXXXXXXXXXXLGGYRRLHR 302
LGGYRRL+R
Sbjct: 85 AVAGPATRAVVAALGGYRRLYR 106
>ref|NP_001150591.1| F-box protein GID2 [Zea mays] gi|195640404|gb|ACG39670.1| F-box
protein GID2 [Zea mays]
Length = 180
Score = 82.8 bits (203), Expect = 4e-14
Identities = 44/82 (53%), Positives = 50/82 (60%), Gaps = 6/82 (7%)
Frame = +3
Query: 75 FPINDNADLLAEVLGRLDGRSLAVAGCVCRLWNALARREAVWEVVCYRH------XXXXX 236
+ INDNADLLAE+L RLDGRSLA A VCRLW A+ARR+AVWE +C RH
Sbjct: 25 YNINDNADLLAEILARLDGRSLAAAAGVCRLWAAVARRDAVWEALCLRHVGPAPSAAAAA 84
Query: 237 XXXXXXXXXXXXXLGGYRRLHR 302
LGGYRRL+R
Sbjct: 85 AVAGPATRAVVAALGGYRRLYR 106
>ref|XP_006469747.1| PREDICTED: F-box protein SNE-like, partial [Citrus sinensis]
Length = 115
Score = 76.6 bits (187), Expect = 3e-12
Identities = 37/75 (49%), Positives = 47/75 (62%)
Frame = +3
Query: 75 FPINDNADLLAEVLGRLDGRSLAVAGCVCRLWNALARREAVWEVVCYRHXXXXXXXXXXX 254
F IND+ D+L E+L RLDGRSL VA CVCRLW LAR +++WE +C+RH
Sbjct: 22 FFINDDIDILIEILKRLDGRSLCVAACVCRLWRTLARNDSLWEELCFRH---VSSPPPSS 78
Query: 255 XXXXXXXLGGYRRLH 299
LGGY+RL+
Sbjct: 79 VRPVVLALGGYKRLY 93
>ref|XP_006447769.1| hypothetical protein CICLE_v10016961mg [Citrus clementina]
gi|568830423|ref|XP_006469499.1| PREDICTED: F-box
protein SNE-like [Citrus sinensis]
gi|557550380|gb|ESR61009.1| hypothetical protein
CICLE_v10016961mg [Citrus clementina]
Length = 170
Score = 76.6 bits (187), Expect = 3e-12
Identities = 37/75 (49%), Positives = 47/75 (62%)
Frame = +3
Query: 75 FPINDNADLLAEVLGRLDGRSLAVAGCVCRLWNALARREAVWEVVCYRHXXXXXXXXXXX 254
F IND+ D+L E+L RLDGRSL VA CVCRLW LAR +++WE +C+RH
Sbjct: 22 FFINDDIDILIEILKRLDGRSLCVAACVCRLWRTLARNDSLWEELCFRH---VSSPPPSS 78
Query: 255 XXXXXXXLGGYRRLH 299
LGGY+RL+
Sbjct: 79 VRPVVLALGGYKRLY 93
>ref|XP_004140002.1| PREDICTED: F-box protein SNE-like [Cucumis sativus]
gi|449532669|ref|XP_004173303.1| PREDICTED: F-box
protein SNE-like [Cucumis sativus]
Length = 152
Score = 76.6 bits (187), Expect = 3e-12
Identities = 39/75 (52%), Positives = 46/75 (61%)
Frame = +3
Query: 75 FPINDNADLLAEVLGRLDGRSLAVAGCVCRLWNALARREAVWEVVCYRHXXXXXXXXXXX 254
F INDN D+L E+L RLDG SL VA CVCRLW +AR E+VWE VC+RH
Sbjct: 16 FLINDNLDILIEILKRLDGPSLGVATCVCRLWCTIARSESVWEQVCFRH---VKSPLPSS 72
Query: 255 XXXXXXXLGGYRRLH 299
LGGY+RL+
Sbjct: 73 VKTVVAALGGYKRLY 87
>gb|EMJ16301.1| hypothetical protein PRUPE_ppa012743mg [Prunus persica]
Length = 156
Score = 76.3 bits (186), Expect = 4e-12
Identities = 37/76 (48%), Positives = 48/76 (63%)
Frame = +3
Query: 75 FPINDNADLLAEVLGRLDGRSLAVAGCVCRLWNALARREAVWEVVCYRHXXXXXXXXXXX 254
F IND+ D+L E+L RLDG SL VA CVCRLW+ LAR +++WE +C+RH
Sbjct: 18 FFINDHIDILVEILKRLDGPSLGVAACVCRLWSTLARNDSLWEHLCFRH---VSSPPPSS 74
Query: 255 XXXXXXXLGGYRRLHR 302
LGGY+RL+R
Sbjct: 75 VRPVVVALGGYKRLYR 90
>ref|XP_006362999.1| PREDICTED: F-box protein SNE-like [Solanum tuberosum]
Length = 164
Score = 75.9 bits (185), Expect = 5e-12
Identities = 37/75 (49%), Positives = 47/75 (62%)
Frame = +3
Query: 75 FPINDNADLLAEVLGRLDGRSLAVAGCVCRLWNALARREAVWEVVCYRHXXXXXXXXXXX 254
F INDN D+L E+L RLDGRSL VA CVC+LW +AR +++WE +C+RH
Sbjct: 5 FFINDNEDVLIEILKRLDGRSLGVAACVCKLWCGIARNDSLWEHLCFRH----VSPPLEG 60
Query: 255 XXXXXXXLGGYRRLH 299
LGGYRRL+
Sbjct: 61 VRTVVLALGGYRRLY 75
>ref|XP_004243874.1| PREDICTED: F-box protein SNE-like [Solanum lycopersicum]
Length = 151
Score = 75.9 bits (185), Expect = 5e-12
Identities = 37/75 (49%), Positives = 47/75 (62%)
Frame = +3
Query: 75 FPINDNADLLAEVLGRLDGRSLAVAGCVCRLWNALARREAVWEVVCYRHXXXXXXXXXXX 254
F INDN D+L E+L RLDGRSL VA CVC+LW +AR +++WE +C+RH
Sbjct: 5 FFINDNEDVLIEILKRLDGRSLGVAACVCKLWCGIARNDSLWEHLCFRH----VSPPLEG 60
Query: 255 XXXXXXXLGGYRRLH 299
LGGYRRL+
Sbjct: 61 VRTVVLALGGYRRLY 75
>gb|EXB98294.1| hypothetical protein L484_014280 [Morus notabilis]
Length = 153
Score = 74.7 bits (182), Expect = 1e-11
Identities = 36/75 (48%), Positives = 47/75 (62%)
Frame = +3
Query: 75 FPINDNADLLAEVLGRLDGRSLAVAGCVCRLWNALARREAVWEVVCYRHXXXXXXXXXXX 254
F INDN D+L E+L RLDG SL +A CVCRLW+A+AR +++WE +C+R
Sbjct: 16 FCINDNIDILIEILKRLDGASLGIAACVCRLWSAVARNDSLWEHLCFRQ---VSSPPPPS 72
Query: 255 XXXXXXXLGGYRRLH 299
LGGYRRL+
Sbjct: 73 VRTVVVALGGYRRLY 87
>emb|CBI28427.3| unnamed protein product [Vitis vinifera]
Length = 1221
Score = 74.3 bits (181), Expect = 2e-11
Identities = 36/75 (48%), Positives = 46/75 (61%)
Frame = +3
Query: 75 FPINDNADLLAEVLGRLDGRSLAVAGCVCRLWNALARREAVWEVVCYRHXXXXXXXXXXX 254
F INDN D+L E+L RLDGRSL VA CVCRLW ++ +++WE +C+RH
Sbjct: 1107 FFINDNTDILMEILKRLDGRSLGVAACVCRLWRSVTWNDSLWEHLCFRH----VSPPPPG 1162
Query: 255 XXXXXXXLGGYRRLH 299
LGGYRRL+
Sbjct: 1163 VRPVVVALGGYRRLY 1177
>ref|XP_002530225.1| F-box protein SNE, putative [Ricinus communis]
gi|223530272|gb|EEF32172.1| F-box protein SNE, putative
[Ricinus communis]
Length = 155
Score = 74.3 bits (181), Expect = 2e-11
Identities = 35/75 (46%), Positives = 46/75 (61%)
Frame = +3
Query: 75 FPINDNADLLAEVLGRLDGRSLAVAGCVCRLWNALARREAVWEVVCYRHXXXXXXXXXXX 254
F IND+ D+L E+L RLDGRSL VA CVC LW +AR +++WE +C+RH
Sbjct: 13 FSINDHVDILVEILKRLDGRSLGVAACVCNLWCTIARNDSLWENLCFRH---VISPPPSG 69
Query: 255 XXXXXXXLGGYRRLH 299
LGGY+RL+
Sbjct: 70 VRPVIVALGGYKRLY 84
>ref|XP_002269904.1| PREDICTED: F-box protein SNE [Vitis vinifera]
gi|147772267|emb|CAN67350.1| hypothetical protein
VITISV_018090 [Vitis vinifera]
Length = 170
Score = 74.3 bits (181), Expect = 2e-11
Identities = 36/75 (48%), Positives = 46/75 (61%)
Frame = +3
Query: 75 FPINDNADLLAEVLGRLDGRSLAVAGCVCRLWNALARREAVWEVVCYRHXXXXXXXXXXX 254
F INDN D+L E+L RLDGRSL VA CVCRLW ++ +++WE +C+RH
Sbjct: 25 FFINDNTDILMEILKRLDGRSLGVAACVCRLWRSVTWNDSLWEHLCFRH----VSPPPPG 80
Query: 255 XXXXXXXLGGYRRLH 299
LGGYRRL+
Sbjct: 81 VRPVVVALGGYRRLY 95
>ref|XP_002321191.1| hypothetical protein POPTR_0014s16360g [Populus trichocarpa]
gi|222861964|gb|EEE99506.1| hypothetical protein
POPTR_0014s16360g [Populus trichocarpa]
Length = 153
Score = 73.9 bits (180), Expect = 2e-11
Identities = 35/75 (46%), Positives = 47/75 (62%)
Frame = +3
Query: 75 FPINDNADLLAEVLGRLDGRSLAVAGCVCRLWNALARREAVWEVVCYRHXXXXXXXXXXX 254
F IND+ D+L E+L RLDGRSL V+ CVCRLW +AR +++WE +C+RH
Sbjct: 12 FCINDHVDILLEILKRLDGRSLCVSACVCRLWCTIARNDSLWEHLCFRH---VSPPPSSG 68
Query: 255 XXXXXXXLGGYRRLH 299
LGGY+RL+
Sbjct: 69 VRPVVVALGGYKRLY 83