BLASTX nr result

ID: Zingiber23_contig00048900 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00048900
         (234 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK47662.1| unknown [Lotus japonicus]                               57   2e-06
gb|EOY04182.1| Basic helix-loop-helix DNA-binding superfamily pr...    56   4e-06
gb|EOY21045.1| BR enhanced expression 1 [Theobroma cacao]              55   7e-06

>gb|AFK47662.1| unknown [Lotus japonicus]
          Length = 274

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 40/71 (56%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
 Frame = -2

Query: 209 GGKRKWVA--QETSSQNCSEPCVVTGSAESKTTRKNGVSQGGKRSRGNGKELEKQKEVVH 36
           G KRK +   QETSS N S P V    +ES +  KN  S  GKR++ N  E EK+KEVVH
Sbjct: 103 GKKRKMIMDIQETSSAN-STPAV----SESGSRIKNN-SGRGKRAKSNVTEEEKEKEVVH 156

Query: 35  VRARRGQATDN 3
           VRARRGQATD+
Sbjct: 157 VRARRGQATDS 167


>gb|EOY04182.1| Basic helix-loop-helix DNA-binding superfamily protein, putative
           [Theobroma cacao]
          Length = 256

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 32/68 (47%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
 Frame = -2

Query: 203 KRKWVAQETSSQNCSEPCVVTGSAESKT-TRKNGVSQGGKRSRGNGKELEKQKEVVHVRA 27
           KRK + Q TS+     P V T      T TRK      GK+ + N K+ EK +EV+HVRA
Sbjct: 82  KRKAMEQSTSNYQSISPAVSTTEIGGNTSTRKRNRLGKGKKGKSNEKQPEKAEEVIHVRA 141

Query: 26  RRGQATDN 3
           RRGQATD+
Sbjct: 142 RRGQATDS 149


>gb|EOY21045.1| BR enhanced expression 1 [Theobroma cacao]
          Length = 278

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 37/68 (54%), Positives = 44/68 (64%), Gaps = 1/68 (1%)
 Frame = -2

Query: 203 KRKWV-AQETSSQNCSEPCVVTGSAESKTTRKNGVSQGGKRSRGNGKELEKQKEVVHVRA 27
           KRK +   E+SS N S P V    +ES   R+N   +G KR+R N K  EK KEVVHVRA
Sbjct: 104 KRKALDVSESSSGNSSSPQV----SESGIKRRNNPGRG-KRARSNEKGEEKPKEVVHVRA 158

Query: 26  RRGQATDN 3
           RRGQATD+
Sbjct: 159 RRGQATDS 166


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