BLASTX nr result

ID: Zingiber23_contig00048859 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00048859
         (249 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272130.1| PREDICTED: E3 ubiquitin-protein ligase SINAT...    57   2e-06

>ref|XP_002272130.1| PREDICTED: E3 ubiquitin-protein ligase SINAT5 [Vitis vinifera]
           gi|147807603|emb|CAN68850.1| hypothetical protein
           VITISV_003067 [Vitis vinifera]
           gi|297742680|emb|CBI35133.3| unnamed protein product
           [Vitis vinifera]
          Length = 305

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 27/44 (61%), Positives = 33/44 (75%)
 Frame = -1

Query: 141 MAPDATYFEEVRLTPEVIDPPKNEDMVEVSEQVNDHVQLTPKPN 10
           MA   TYF+++R   EVIDPP++EDM+EVSE VND  Q T KPN
Sbjct: 1   MASGNTYFDDMRSKSEVIDPPQSEDMMEVSEHVNDPAQTTLKPN 44


Top