BLASTX nr result
ID: Zingiber23_contig00048743
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00048743
(363 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMT29724.1| hypothetical protein F775_19387 [Aegilops tauschii] 95 8e-18
ref|XP_004487457.1| PREDICTED: pentatricopeptide repeat-containi... 93 3e-17
ref|XP_003626823.1| Pentatricopeptide repeat-containing protein ... 92 7e-17
ref|XP_003596871.1| Pentatricopeptide repeat-containing protein ... 91 2e-16
ref|XP_003596877.1| Pentatricopeptide repeat-containing protein ... 89 5e-16
ref|XP_002274172.1| PREDICTED: pentatricopeptide repeat-containi... 89 6e-16
gb|EMT24034.1| hypothetical protein F775_16623 [Aegilops tauschii] 88 1e-15
ref|XP_001764438.1| predicted protein [Physcomitrella patens] gi... 88 1e-15
gb|AEC33263.1| putative pentatricopeptide protein [Triticum aest... 88 1e-15
ref|XP_002523877.1| pentatricopeptide repeat-containing protein,... 88 1e-15
ref|XP_002305798.2| pentatricopeptide repeat-containing family p... 86 5e-15
gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygr... 86 5e-15
tpg|DAA52972.1| TPA: hypothetical protein ZEAMMB73_038558 [Zea m... 86 7e-15
ref|XP_002887214.1| pentatricopeptide repeat-containing protein ... 86 7e-15
gb|EXB90557.1| hypothetical protein L484_001711 [Morus notabilis] 85 9e-15
ref|XP_006301711.1| hypothetical protein CARUB_v10022169mg [Caps... 85 1e-14
ref|XP_006296191.1| hypothetical protein CARUB_v10025353mg [Caps... 84 1e-14
ref|XP_004144516.1| PREDICTED: pentatricopeptide repeat-containi... 84 1e-14
gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula] 84 2e-14
ref|XP_003594983.1| Pentatricopeptide repeat-containing protein ... 84 2e-14
>gb|EMT29724.1| hypothetical protein F775_19387 [Aegilops tauschii]
Length = 611
Score = 95.1 bits (235), Expect = 8e-18
Identities = 54/111 (48%), Positives = 72/111 (64%)
Frame = -1
Query: 348 HAVAITAGILLDPDPLVRNSLITMYSKCGDLASARRVFDGMSRRSVASWTAMISLCGAHG 169
H +A+ +G+ L+ D V N+L+ MY KCGDLA+A RVF+ M RR V +W +MI + G +G
Sbjct: 336 HGMALRSGLALERD--VSNALVDMYGKCGDLAAATRVFNAMPRRDVLTWNSMIGVLGMNG 393
Query: 168 RAPDAVALFGRMVEEIGEAGLDGPAMTAVLAACAKGGPAEAEFGRRVFEMM 16
RA DA+AL RM +E G+ +G M AVL+ACA GG E G FE M
Sbjct: 394 RARDALALLDRMEQE-GDIMPNGVTMLAVLSACAHGGLVEE--GVACFERM 441
Score = 64.7 bits (156), Expect = 1e-08
Identities = 41/108 (37%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Frame = -1
Query: 363 LGCTIHAVAITAGILLDPDPLVRNSLITMYSKCGDLASARRVFDGMSRRSVASWTAMISL 184
LG ++HA G L D + NSL+ MY++C DL SAR+VFD + R+V SW M+S
Sbjct: 119 LGASLHAAGERRG-LRGGDVFIDNSLVDMYARCLDLRSARKVFDTIPCRNVVSWNTMLSG 177
Query: 183 CGAHGRAPDAVALFGRMVEEIGEAGL--DGPAMTAVLAACAK--GGPA 52
GRA DA+ L + E G+ D + +L C + GG A
Sbjct: 178 LARAGRAADALDLLSSPSSLLKEGGIGFDETTLAVLLQLCKRLEGGQA 225
Score = 63.2 bits (152), Expect = 4e-08
Identities = 38/97 (39%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Frame = -1
Query: 354 TIHAVAITAGILLDPDPL-VRNSLITMYSKCGDLASARRVFDGMSRRSVASWTAMISLCG 178
++HAVAI G+LL L + N+L+ Y+KCG L R+F GM +R++ +W+ +IS C
Sbjct: 230 SVHAVAIRRGLLLSSTGLPLLNALLDAYAKCGLLEHTLRLFRGMPKRNIITWSTIISGCA 289
Query: 177 AHGRAPDAVALFGRMVEEIGEAGLDGPAMTAVLAACA 67
+GR +A+A M E GE + + +VL ACA
Sbjct: 290 HNGRPGEAIACAVAM-REAGETP-NSVTILSVLEACA 324
>ref|XP_004487457.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cicer arietinum]
Length = 316
Score = 93.2 bits (230), Expect = 3e-17
Identities = 54/116 (46%), Positives = 68/116 (58%)
Frame = -1
Query: 363 LGCTIHAVAITAGILLDPDPLVRNSLITMYSKCGDLASARRVFDGMSRRSVASWTAMISL 184
+G +H + G LD L N+LI MY KCG L AR+VFDGM R+ +W+ M+S
Sbjct: 127 IGQQVHGAVLVNGFGLDLKNL--NALIHMYGKCGHLGFARKVFDGMCERNEVTWSTMMSC 184
Query: 183 CGAHGRAPDAVALFGRMVEEIGEAGLDGPAMTAVLAACAKGGPAEAEFGRRVFEMM 16
G HGR + +FGRMVEE + DG TAVL+AC+ GG E GR FEMM
Sbjct: 185 YGMHGRFEEVFEMFGRMVEEGKKP--DGVTFTAVLSACSHGGFVEK--GREYFEMM 236
>ref|XP_003626823.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355520845|gb|AET01299.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 355
Score = 92.0 bits (227), Expect = 7e-17
Identities = 52/117 (44%), Positives = 70/117 (59%)
Frame = -1
Query: 363 LGCTIHAVAITAGILLDPDPLVRNSLITMYSKCGDLASARRVFDGMSRRSVASWTAMISL 184
LG +H + G LD N+LI MY+KCG+L AR+VFDGM R+ +W+ MI+
Sbjct: 127 LGKQVHGAVLVNGFALDLKN--SNALINMYAKCGELEFARKVFDGMCERNEVTWSTMIAG 184
Query: 183 CGAHGRAPDAVALFGRMVEEIGEAGLDGPAMTAVLAACAKGGPAEAEFGRRVFEMMR 13
G HGR + +F RMV E+GE +D + T VL AC+ GG E GR +FEMM+
Sbjct: 185 YGMHGRFEEVFEMFNRMV-EVGER-MDNVSFTVVLTACSHGGFVEK--GREIFEMMK 237
>ref|XP_003596871.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|124359886|gb|ABD32760.2| Tetratricopeptide-like
helical [Medicago truncatula]
gi|355485919|gb|AES67122.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 316
Score = 90.9 bits (224), Expect = 2e-16
Identities = 51/117 (43%), Positives = 70/117 (59%)
Frame = -1
Query: 363 LGCTIHAVAITAGILLDPDPLVRNSLITMYSKCGDLASARRVFDGMSRRSVASWTAMISL 184
LG +H + G LD N+LI MY+KCG+L AR+VFDGM R+ +W+ M++
Sbjct: 127 LGKQVHGAVLVNGFALDLKN--SNALINMYAKCGELEFARKVFDGMCERNEVTWSTMMAG 184
Query: 183 CGAHGRAPDAVALFGRMVEEIGEAGLDGPAMTAVLAACAKGGPAEAEFGRRVFEMMR 13
G HGR + +F RMV E+GE +D + T VL AC+ GG E GR +FEMM+
Sbjct: 185 YGMHGRFEEVFEMFNRMV-EVGER-MDNVSFTVVLTACSHGGFVEK--GREIFEMMK 237
>ref|XP_003596877.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|87240912|gb|ABD32770.1| Tetratricopeptide-like
helical [Medicago truncatula]
gi|355485925|gb|AES67128.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 316
Score = 89.4 bits (220), Expect = 5e-16
Identities = 50/117 (42%), Positives = 70/117 (59%)
Frame = -1
Query: 363 LGCTIHAVAITAGILLDPDPLVRNSLITMYSKCGDLASARRVFDGMSRRSVASWTAMISL 184
LG +H + G LD N+LI MY+KCG+L AR+VFDGM R+ +W+ M++
Sbjct: 127 LGKQVHGAVLVNGFALDLKN--SNALINMYAKCGELEFARKVFDGMCERNEVTWSTMMAD 184
Query: 183 CGAHGRAPDAVALFGRMVEEIGEAGLDGPAMTAVLAACAKGGPAEAEFGRRVFEMMR 13
G HGR + +F RMV E+GE +D + T VL AC+ GG E GR +FE+M+
Sbjct: 185 FGMHGRFEEVFEMFNRMV-EVGER-MDSVSFTVVLTACSHGGFVEK--GREIFEIMK 237
>ref|XP_002274172.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic [Vitis vinifera]
Length = 313
Score = 89.0 bits (219), Expect = 6e-16
Identities = 53/118 (44%), Positives = 73/118 (61%)
Frame = -1
Query: 363 LGCTIHAVAITAGILLDPDPLVRNSLITMYSKCGDLASARRVFDGMSRRSVASWTAMISL 184
LG +H + G+ D + N+LI+MYSKCGDLA+AR+VFD M+ R++ +W+AM++
Sbjct: 126 LGRQVHCAVVANGLASDLATI--NALISMYSKCGDLAAARKVFDRMTERNLVTWSAMMAG 183
Query: 183 CGAHGRAPDAVALFGRMVEEIGEAGLDGPAMTAVLAACAKGGPAEAEFGRRVFEMMRD 10
G HG + LF MV + GE DG TAVLAAC+ GG E GR+ F MM +
Sbjct: 184 YGVHGVFGEVFELFDGMV-DAGEVP-DGVTFTAVLAACSHGG--FMENGRKYFGMMEE 237
>gb|EMT24034.1| hypothetical protein F775_16623 [Aegilops tauschii]
Length = 672
Score = 88.2 bits (217), Expect = 1e-15
Identities = 51/116 (43%), Positives = 68/116 (58%)
Frame = -1
Query: 363 LGCTIHAVAITAGILLDPDPLVRNSLITMYSKCGDLASARRVFDGMSRRSVASWTAMISL 184
LG +HA AI + ++D LV N LI MY+KCG +A AR VFDGM R + SW +M++
Sbjct: 237 LGREVHADAIRS--MVDRHSLVANGLINMYAKCGRVADARTVFDGMKSRDLVSWNSMLAG 294
Query: 183 CGAHGRAPDAVALFGRMVEEIGEAGLDGPAMTAVLAACAKGGPAEAEFGRRVFEMM 16
G HG DA+A+F M E + DG AVL+AC+ G GRR+F+ M
Sbjct: 295 YGMHGLCDDALAVFTDMAE--AKVDPDGVTFVAVLSACSHAG--RVSEGRRLFDQM 346
>ref|XP_001764438.1| predicted protein [Physcomitrella patens]
gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella
patens] gi|162684302|gb|EDQ70705.1| predicted protein
[Physcomitrella patens]
Length = 868
Score = 88.2 bits (217), Expect = 1e-15
Identities = 50/117 (42%), Positives = 71/117 (60%)
Frame = -1
Query: 360 GCTIHAVAITAGILLDPDPLVRNSLITMYSKCGDLASARRVFDGMSRRSVASWTAMISLC 181
G +HA A+ G L+ D +V SLI MYSKCG +A AR VFD MS R +W AM++
Sbjct: 515 GKLVHAEAVKLG--LESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAMLAGY 572
Query: 180 GAHGRAPDAVALFGRMVEEIGEAGLDGPAMTAVLAACAKGGPAEAEFGRRVFEMMRD 10
G HG +AV LF RM++E + +TAV++AC++ G + GR +F MM++
Sbjct: 573 GQHGDGLEAVDLFKRMLKE--RVSPNEITLTAVISACSRAGLVQE--GREIFRMMQE 625
Score = 63.5 bits (153), Expect = 3e-08
Identities = 39/111 (35%), Positives = 59/111 (53%)
Frame = -1
Query: 360 GCTIHAVAITAGILLDPDPLVRNSLITMYSKCGDLASARRVFDGMSRRSVASWTAMISLC 181
G IH + G ++ D V +LITMYSKCG+++ A VF M+ R+V SWTA+I
Sbjct: 176 GRKIHTIVKAMG--METDVAVATALITMYSKCGEISVACEVFHKMTERNVVSWTAIIQAN 233
Query: 180 GAHGRAPDAVALFGRMVEEIGEAGLDGPAMTAVLAACAKGGPAEAEFGRRV 28
H + +A L+ +M+ +AG+ A+T V + P GRR+
Sbjct: 234 AQHRKLNEAFELYEQML----QAGISPNAVTFVSLLNSCNTPEALNRGRRI 280
Score = 58.5 bits (140), Expect = 9e-07
Identities = 38/111 (34%), Positives = 60/111 (54%), Gaps = 9/111 (8%)
Frame = -1
Query: 318 LDPDPLVRNSLITMYSKCGDLASARRVFDGMSRRSVASWTAMISLCGAHG-RAPDAVALF 142
L+ D +V N+LITMY KC + AR +FD MS+R V SW+AMI+ G + +++
Sbjct: 289 LETDMIVANALITMYCKCNSVQEAREIFDRMSKRDVISWSAMIAGYAQSGYKDKESIDEV 348
Query: 141 GRMVEEIGEAGLDGPAMT--AVLAACAKGGPAE------AEFGRRVFEMMR 13
+++E + G+ +T ++L AC G E AE + FE+ R
Sbjct: 349 FQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHAELSKVGFELDR 399
>gb|AEC33263.1| putative pentatricopeptide protein [Triticum aestivum]
Length = 644
Score = 88.2 bits (217), Expect = 1e-15
Identities = 51/116 (43%), Positives = 68/116 (58%)
Frame = -1
Query: 363 LGCTIHAVAITAGILLDPDPLVRNSLITMYSKCGDLASARRVFDGMSRRSVASWTAMISL 184
LG +HA AI + ++D LV N LI MY+KCG +A AR VFDGM R + SW +M++
Sbjct: 369 LGREVHADAIRS--MVDRHSLVANGLINMYAKCGRVADARTVFDGMKSRDLVSWNSMLAG 426
Query: 183 CGAHGRAPDAVALFGRMVEEIGEAGLDGPAMTAVLAACAKGGPAEAEFGRRVFEMM 16
G HG DA+A+F M E + DG AVL+AC+ G GRR+F+ M
Sbjct: 427 YGMHGLCDDALAVFTDMAE--AKVDPDGVTFVAVLSACSHAG--RVSEGRRLFDQM 478
>ref|XP_002523877.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223536965|gb|EEF38603.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 302
Score = 87.8 bits (216), Expect = 1e-15
Identities = 49/118 (41%), Positives = 69/118 (58%)
Frame = -1
Query: 363 LGCTIHAVAITAGILLDPDPLVRNSLITMYSKCGDLASARRVFDGMSRRSVASWTAMISL 184
LG +H + + G+ D N+LI MY+KCG+LA AR+VFD M R+ SW M++
Sbjct: 123 LGQQVHGILLINGLAFDLAN--SNALINMYAKCGNLAGARKVFDRMPARNEVSWATMMAG 180
Query: 183 CGAHGRAPDAVALFGRMVEEIGEAGLDGPAMTAVLAACAKGGPAEAEFGRRVFEMMRD 10
G HG+ + + LF RMVEE + +D +TAVL+AC+ GG E G F MM +
Sbjct: 181 YGMHGKGGEVLVLFNRMVEE--GSSVDAVCLTAVLSACSHGGMVEK--GAEYFGMMEE 234
>ref|XP_002305798.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550340302|gb|EEE86309.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 591
Score = 85.9 bits (211), Expect = 5e-15
Identities = 54/120 (45%), Positives = 72/120 (60%), Gaps = 2/120 (1%)
Frame = -1
Query: 363 LGCTIHAVAITAGILLDPDPLVRNSLITMYSKCGDLASARRVFDGMSRRSVASWTAMISL 184
LGC +H A+ G LD + ++ SLI MY++CG+++ AR VFD M R+V +WTAMIS
Sbjct: 230 LGCWVHEYAVGNG--LDLNVVLGTSLINMYTRCGNVSKAREVFDSMKERNVVAWTAMISG 287
Query: 183 CGAHGRAPDAVALFGRMVEEIGEAGLDGPAMT--AVLAACAKGGPAEAEFGRRVFEMMRD 10
G +G AV LF E+ GL ++T AVL+ACA G GRRVFE MR+
Sbjct: 288 YGTNGYGSQAVELF----HEMRRNGLLPNSITFVAVLSACAHAGLVNE--GRRVFESMRE 341
Score = 63.2 bits (152), Expect = 4e-08
Identities = 41/101 (40%), Positives = 57/101 (56%)
Frame = -1
Query: 360 GCTIHAVAITAGILLDPDPLVRNSLITMYSKCGDLASARRVFDGMSRRSVASWTAMISLC 181
G IH + G D V+ +L++ Y KCG L +AR+VFD M RSV +W +MIS
Sbjct: 130 GRIIHGHVLVNGF--GSDVYVQTALMSFYGKCGVLCNARKVFDKMRDRSVVTWNSMISGY 187
Query: 180 GAHGRAPDAVALFGRMVEEIGEAGLDGPAMTAVLAACAKGG 58
+G A +A+ LF RM +EIG + +VL+ACA G
Sbjct: 188 EQNGFAKEAIRLFDRM-KEIG-VEPNSATFVSVLSACAHLG 226
>gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
Length = 890
Score = 85.9 bits (211), Expect = 5e-15
Identities = 48/117 (41%), Positives = 70/117 (59%)
Frame = -1
Query: 360 GCTIHAVAITAGILLDPDPLVRNSLITMYSKCGDLASARRVFDGMSRRSVASWTAMISLC 181
G +HA A+ G L+ D +V SLI MYSKCG++ AR VFD +S R +W AM++
Sbjct: 537 GKLVHAEAVKLG--LESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNAMLAGY 594
Query: 180 GAHGRAPDAVALFGRMVEEIGEAGLDGPAMTAVLAACAKGGPAEAEFGRRVFEMMRD 10
G HG P+AV LF RM++E + TAV++AC + G + GR +F +M++
Sbjct: 595 GQHGIGPEAVDLFKRMLKE--RVPPNEITFTAVISACGRAGLVQE--GREIFRIMQE 647
Score = 63.9 bits (154), Expect = 2e-08
Identities = 38/108 (35%), Positives = 58/108 (53%)
Frame = -1
Query: 351 IHAVAITAGILLDPDPLVRNSLITMYSKCGDLASARRVFDGMSRRSVASWTAMISLCGAH 172
IH V +G ++ D V +LITMYSKCG+++ A +F M R+V SWTA+I H
Sbjct: 201 IHTVVKASG--METDVAVATALITMYSKCGEISLACEIFQKMKERNVVSWTAIIQANAQH 258
Query: 171 GRAPDAVALFGRMVEEIGEAGLDGPAMTAVLAACAKGGPAEAEFGRRV 28
+ +A L+ +M+ +AG+ A+T V + P GRR+
Sbjct: 259 RKLNEAFELYEKML----QAGISPNAVTFVSLLNSCNTPEALNRGRRI 302
>tpg|DAA52972.1| TPA: hypothetical protein ZEAMMB73_038558 [Zea mays]
Length = 641
Score = 85.5 bits (210), Expect = 7e-15
Identities = 49/116 (42%), Positives = 66/116 (56%)
Frame = -1
Query: 363 LGCTIHAVAITAGILLDPDPLVRNSLITMYSKCGDLASARRVFDGMSRRSVASWTAMISL 184
LG +H I A LD LV+N L+ Y KCG +A+AR+VFDGM R + SW +MI
Sbjct: 366 LGQEVHGHTIKAA--LDRHSLVQNGLVNTYGKCGKVATARKVFDGMKSRDLISWNSMIGS 423
Query: 183 CGAHGRAPDAVALFGRMVEEIGEAGLDGPAMTAVLAACAKGGPAEAEFGRRVFEMM 16
GAHG +A+A+F + + E DG AVL+AC+ G GRR+F+ M
Sbjct: 424 YGAHGMCDEALAMFQDLTRALIEP--DGVTFVAVLSACSHTG--RVAEGRRLFDQM 475
>ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297333055|gb|EFH63473.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 740
Score = 85.5 bits (210), Expect = 7e-15
Identities = 50/117 (42%), Positives = 71/117 (60%), Gaps = 2/117 (1%)
Frame = -1
Query: 360 GCTIHAVAITAGILLDPDPLVRNSLITMYSKCGDLASARRVFDGMSRRSVASWTAMISLC 181
G H AITAG++ V NSL+T+Y KCGD+ + R+F+ M+ R SWTAM+S
Sbjct: 387 GSQFHGKAITAGLI--HYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAY 444
Query: 180 GAHGRAPDAVALFGRMVEEIGEAGL--DGPAMTAVLAACAKGGPAEAEFGRRVFEMM 16
GRA +A+ LF +MV + GL DG +T V++AC++ G E G+R FE+M
Sbjct: 445 AQFGRAVEAIQLFDKMV----QLGLKPDGVTLTGVISACSRAGLVEK--GQRYFELM 495
>gb|EXB90557.1| hypothetical protein L484_001711 [Morus notabilis]
Length = 543
Score = 85.1 bits (209), Expect = 9e-15
Identities = 46/102 (45%), Positives = 65/102 (63%)
Frame = -1
Query: 363 LGCTIHAVAITAGILLDPDPLVRNSLITMYSKCGDLASARRVFDGMSRRSVASWTAMISL 184
+G IH + I G ++ + +V N+L+ MY+KCGDLA AR VF+GM+ R+ A W AMIS
Sbjct: 310 VGREIHDMIIEKG--MECNQIVLNALVDMYAKCGDLACARSVFEGMTERNAACWNAMISG 367
Query: 183 CGAHGRAPDAVALFGRMVEEIGEAGLDGPAMTAVLAACAKGG 58
HG+ +A+ LFG+M E E D +VL+ACA+GG
Sbjct: 368 FAVHGQCEEALELFGKM--ESSEEMPDDVTFLSVLSACARGG 407
Score = 56.6 bits (135), Expect = 3e-06
Identities = 32/76 (42%), Positives = 43/76 (56%)
Frame = -1
Query: 360 GCTIHAVAITAGILLDPDPLVRNSLITMYSKCGDLASARRVFDGMSRRSVASWTAMISLC 181
G +HA +I +G L D LV SL+ MY+KC ++ AR+ FD M R+V +W AMI
Sbjct: 84 GKALHAESIKSGTLFDV--LVGTSLVDMYAKCREIFDARKAFDLMPERNVVTWNAMIGGY 141
Query: 180 GAHGRAPDAVALFGRM 133
+G A LF RM
Sbjct: 142 LKNGDVESAFVLFERM 157
>ref|XP_006301711.1| hypothetical protein CARUB_v10022169mg [Capsella rubella]
gi|482570421|gb|EOA34609.1| hypothetical protein
CARUB_v10022169mg [Capsella rubella]
Length = 743
Score = 84.7 bits (208), Expect = 1e-14
Identities = 49/117 (41%), Positives = 71/117 (60%), Gaps = 2/117 (1%)
Frame = -1
Query: 360 GCTIHAVAITAGILLDPDPLVRNSLITMYSKCGDLASARRVFDGMSRRSVASWTAMISLC 181
G H AIT+G++ V NSL+T+Y KCGD+ + R+F+ M+ R SWTAM+S
Sbjct: 390 GSQFHGKAITSGLI--HYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTAMVSAY 447
Query: 180 GAHGRAPDAVALFGRMVEEIGEAGL--DGPAMTAVLAACAKGGPAEAEFGRRVFEMM 16
GRA +A+ LF +MV+ GL DG +T V++AC++ G E G+R FE+M
Sbjct: 448 AQFGRAIEAIQLFDKMVQH----GLKPDGVTLTGVISACSRAGLVEK--GQRYFELM 498
>ref|XP_006296191.1| hypothetical protein CARUB_v10025353mg [Capsella rubella]
gi|482564899|gb|EOA29089.1| hypothetical protein
CARUB_v10025353mg [Capsella rubella]
Length = 579
Score = 84.3 bits (207), Expect = 1e-14
Identities = 48/119 (40%), Positives = 68/119 (57%)
Frame = -1
Query: 363 LGCTIHAVAITAGILLDPDPLVRNSLITMYSKCGDLASARRVFDGMSRRSVASWTAMISL 184
LG +H + G LD + + +L+ +YS+CGD+ +R VFD M +VA+WTAMIS
Sbjct: 222 LGSWVHQYIVREG--LDLNVKLGTALVNLYSRCGDVGKSREVFDKMKETNVAAWTAMISA 279
Query: 183 CGAHGRAPDAVALFGRMVEEIGEAGLDGPAMTAVLAACAKGGPAEAEFGRRVFEMMRDG 7
G HG AV LF +M ++ G A + AVL+ACA G E GR V++ M +G
Sbjct: 280 YGTHGYGKQAVELFNKMEDDCGLAP-NNVTFVAVLSACAHAGLVEE--GRSVYKRMTEG 335
Score = 69.3 bits (168), Expect = 5e-10
Identities = 39/102 (38%), Positives = 60/102 (58%)
Frame = -1
Query: 363 LGCTIHAVAITAGILLDPDPLVRNSLITMYSKCGDLASARRVFDGMSRRSVASWTAMISL 184
+G +H A+ G LD V+ + +T YSKCGDL +AR+VFD M +S+ +W ++IS
Sbjct: 121 IGEGVHCHAVVTGFGLDT--YVQAAFVTFYSKCGDLRAARQVFDIMPEKSIVAWNSLISG 178
Query: 183 CGAHGRAPDAVALFGRMVEEIGEAGLDGPAMTAVLAACAKGG 58
+G A DA+ +F +M E E D ++L+ACA+ G
Sbjct: 179 LEQNGMAEDAIRVFYQMQESGLEP--DSATFVSLLSACAQTG 218
>ref|XP_004144516.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
gi|449515851|ref|XP_004164961.1| PREDICTED:
pentatricopeptide repeat-containing protein At3g46790,
chloroplastic-like [Cucumis sativus]
Length = 308
Score = 84.3 bits (207), Expect = 1e-14
Identities = 51/117 (43%), Positives = 66/117 (56%)
Frame = -1
Query: 363 LGCTIHAVAITAGILLDPDPLVRNSLITMYSKCGDLASARRVFDGMSRRSVASWTAMISL 184
LG +H + G D L N+LITMY KCGDL AR+VFDGM R+ SW+A+++
Sbjct: 127 LGRQVHGALLINGFSADLPSL--NALITMYGKCGDLGVARKVFDGMPERNEVSWSALMAG 184
Query: 183 CGAHGRAPDAVALFGRMVEEIGEAGLDGPAMTAVLAACAKGGPAEAEFGRRVFEMMR 13
G HG + LF RMVEE + D T++L AC+ GG E G+ F MMR
Sbjct: 185 YGVHGMFGEVFRLFERMVEEGQKP--DELTFTSLLTACSHGGLIEK--GKEYFGMMR 237
>gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 609
Score = 84.0 bits (206), Expect = 2e-14
Identities = 45/101 (44%), Positives = 64/101 (63%)
Frame = -1
Query: 318 LDPDPLVRNSLITMYSKCGDLASARRVFDGMSRRSVASWTAMISLCGAHGRAPDAVALFG 139
L D V +LI MY+KCG L SA+RVF+ M R++ ASW AMIS +HG+A +A++LF
Sbjct: 351 LQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFE 410
Query: 138 RMVEEIGEAGLDGPAMTAVLAACAKGGPAEAEFGRRVFEMM 16
RM +E G A + ++L+AC G + G R+F+MM
Sbjct: 411 RMSDEGGSARPNDITFVSLLSACVHAGLVDE--GYRLFDMM 449
Score = 69.7 bits (169), Expect = 4e-10
Identities = 38/83 (45%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Frame = -1
Query: 300 VRNSLITMYSKCGDLASARRVFDGMSRRSVASWTAMISLCGAHGRAPDAVALFGRMVEEI 121
+ ++LI+MYSKCG+L S+RR+FDGM R +W A IS +G A +A++LF M E
Sbjct: 256 IGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKEN- 314
Query: 120 GEAGLD--GPAMTAVLAACAKGG 58
G+D +TAVL+ACA G
Sbjct: 315 ---GVDPNKVTLTAVLSACASIG 334
Score = 64.7 bits (156), Expect = 1e-08
Identities = 38/97 (39%), Positives = 58/97 (59%)
Frame = -1
Query: 318 LDPDPLVRNSLITMYSKCGDLASARRVFDGMSRRSVASWTAMISLCGAHGRAPDAVALFG 139
LD D NS++TMY +CG+ AR+VFD ++ + + SW +++S G A +AV +FG
Sbjct: 148 LDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFG 207
Query: 138 RMVEEIGEAGLDGPAMTAVLAACAKGGPAEAEFGRRV 28
R+ EE G D ++ +VL AC + G + E GR V
Sbjct: 208 RLREESGFEP-DEMSLVSVLGACGELG--DLELGRWV 241
>ref|XP_003594983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484031|gb|AES65234.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 702
Score = 84.0 bits (206), Expect = 2e-14
Identities = 45/101 (44%), Positives = 64/101 (63%)
Frame = -1
Query: 318 LDPDPLVRNSLITMYSKCGDLASARRVFDGMSRRSVASWTAMISLCGAHGRAPDAVALFG 139
L D V +LI MY+KCG L SA+RVF+ M R++ ASW AMIS +HG+A +A++LF
Sbjct: 351 LQHDIFVATALIDMYAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFE 410
Query: 138 RMVEEIGEAGLDGPAMTAVLAACAKGGPAEAEFGRRVFEMM 16
RM +E G A + ++L+AC G + G R+F+MM
Sbjct: 411 RMSDEGGSARPNDITFVSLLSACVHAGLVDE--GYRLFDMM 449
Score = 69.7 bits (169), Expect = 4e-10
Identities = 38/83 (45%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Frame = -1
Query: 300 VRNSLITMYSKCGDLASARRVFDGMSRRSVASWTAMISLCGAHGRAPDAVALFGRMVEEI 121
+ ++LI+MYSKCG+L S+RR+FDGM R +W A IS +G A +A++LF M E
Sbjct: 256 IGSALISMYSKCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKEN- 314
Query: 120 GEAGLD--GPAMTAVLAACAKGG 58
G+D +TAVL+ACA G
Sbjct: 315 ---GVDPNKVTLTAVLSACASIG 334
Score = 64.7 bits (156), Expect = 1e-08
Identities = 38/97 (39%), Positives = 58/97 (59%)
Frame = -1
Query: 318 LDPDPLVRNSLITMYSKCGDLASARRVFDGMSRRSVASWTAMISLCGAHGRAPDAVALFG 139
LD D NS++TMY +CG+ AR+VFD ++ + + SW +++S G A +AV +FG
Sbjct: 148 LDNDHHTVNSMVTMYFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFG 207
Query: 138 RMVEEIGEAGLDGPAMTAVLAACAKGGPAEAEFGRRV 28
R+ EE G D ++ +VL AC + G + E GR V
Sbjct: 208 RLREESGFEP-DEMSLVSVLGACGELG--DLELGRWV 241