BLASTX nr result
ID: Zingiber23_contig00048669
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00048669
(388 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004970183.1| PREDICTED: katanin p80 WD40 repeat-containin... 74 2e-11
ref|XP_003564353.1| PREDICTED: katanin p80 WD40 repeat-containin... 70 2e-10
ref|NP_001170410.1| uncharacterized protein LOC100384397 [Zea ma... 64 2e-08
ref|XP_006646391.1| PREDICTED: katanin p80 WD40 repeat-containin... 62 1e-07
ref|NP_001044436.1| Os01g0780400 [Oryza sativa Japonica Group] g... 61 2e-07
gb|EEE55490.1| hypothetical protein OsJ_03675 [Oryza sativa Japo... 61 2e-07
gb|EEC71594.1| hypothetical protein OsI_03978 [Oryza sativa Indi... 61 2e-07
gb|EMS68408.1| Katanin p80 WD40 repeat-containing subunit B1-lik... 58 1e-06
gb|EMT11460.1| hypothetical protein F775_05157 [Aegilops tauschii] 57 2e-06
ref|XP_002456444.1| hypothetical protein SORBIDRAFT_03g036400 [S... 56 4e-06
ref|XP_006377307.1| hypothetical protein POPTR_0011s04530g [Popu... 55 7e-06
>ref|XP_004970183.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
[Setaria italica]
Length = 833
Score = 73.9 bits (180), Expect = 2e-11
Identities = 37/75 (49%), Positives = 50/75 (66%)
Frame = +2
Query: 50 ETDKREHDKTRDIARDFERVVSLEQPVHSQNDHCEELTCSSSETKSVTYVRGVAVQLGKT 229
E + + + IA++ +R V LE P+ S +D E CS++ET V YVRGVAV LGKT
Sbjct: 547 ENSEVDREDIAHIAKEMDRTVLLEHPLQSNDDKSFESPCSTTETARVKYVRGVAVPLGKT 606
Query: 230 RTLVECWEKRERSSS 274
++LVE WEKRE SS+
Sbjct: 607 KSLVERWEKRESSSN 621
>ref|XP_003564353.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
1-like [Brachypodium distachyon]
Length = 828
Score = 70.5 bits (171), Expect = 2e-10
Identities = 38/73 (52%), Positives = 48/73 (65%)
Frame = +2
Query: 53 TDKREHDKTRDIARDFERVVSLEQPVHSQNDHCEELTCSSSETKSVTYVRGVAVQLGKTR 232
+D + IA + +RVVSLE PV S +D E CS++E V YVRGVAV LGKT+
Sbjct: 543 SDGTDKGDITQIAENMDRVVSLEHPVQSNDDKSFEPPCSTTEPSRVKYVRGVAVPLGKTK 602
Query: 233 TLVECWEKRERSS 271
+LVE +EKRE SS
Sbjct: 603 SLVERFEKRESSS 615
>ref|NP_001170410.1| uncharacterized protein LOC100384397 [Zea mays]
gi|224035705|gb|ACN36928.1| unknown [Zea mays]
gi|413952248|gb|AFW84897.1| hypothetical protein
ZEAMMB73_564557 [Zea mays]
Length = 271
Score = 64.3 bits (155), Expect = 2e-08
Identities = 33/58 (56%), Positives = 40/58 (68%)
Frame = +2
Query: 101 ERVVSLEQPVHSQNDHCEELTCSSSETKSVTYVRGVAVQLGKTRTLVECWEKRERSSS 274
ER VSL+ +D E CS++ET V YVRGVAV LGKT++LVE WEKRE SS+
Sbjct: 2 ERTVSLDHSQQLNDDKSFESPCSTTETAKVKYVRGVAVPLGKTKSLVERWEKRETSST 59
>ref|XP_006646391.1| PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog
[Oryza brachyantha]
Length = 832
Score = 61.6 bits (148), Expect = 1e-07
Identities = 33/74 (44%), Positives = 45/74 (60%)
Frame = +2
Query: 50 ETDKREHDKTRDIARDFERVVSLEQPVHSQNDHCEELTCSSSETKSVTYVRGVAVQLGKT 229
E + + +A +R VSLE + S + E CS++ET V YVRGVAV LGKT
Sbjct: 549 ECNNMDKSDITQMAEKMDRTVSLEHQLQSNDSF--ESPCSTTETTKVKYVRGVAVPLGKT 606
Query: 230 RTLVECWEKRERSS 271
++LVE WEKRE ++
Sbjct: 607 KSLVERWEKREATN 620
>ref|NP_001044436.1| Os01g0780400 [Oryza sativa Japonica Group]
gi|53792220|dbj|BAD52853.1| katanin p80
(WD40-containing) subunit B 1-like protein [Oryza sativa
Japonica Group] gi|113533967|dbj|BAF06350.1|
Os01g0780400 [Oryza sativa Japonica Group]
Length = 838
Score = 60.8 bits (146), Expect = 2e-07
Identities = 32/74 (43%), Positives = 45/74 (60%)
Frame = +2
Query: 50 ETDKREHDKTRDIARDFERVVSLEQPVHSQNDHCEELTCSSSETKSVTYVRGVAVQLGKT 229
+ D + + +R VSLE + Q++ E CS++ET V YVRGVAV LGKT
Sbjct: 554 KVDSMDKGDNTQMTEKLDRTVSLEHQL--QSNDTSEPPCSTTETTKVKYVRGVAVPLGKT 611
Query: 230 RTLVECWEKRERSS 271
++LVE WEKRE ++
Sbjct: 612 KSLVERWEKREATN 625
>gb|EEE55490.1| hypothetical protein OsJ_03675 [Oryza sativa Japonica Group]
Length = 759
Score = 60.8 bits (146), Expect = 2e-07
Identities = 32/74 (43%), Positives = 45/74 (60%)
Frame = +2
Query: 50 ETDKREHDKTRDIARDFERVVSLEQPVHSQNDHCEELTCSSSETKSVTYVRGVAVQLGKT 229
+ D + + +R VSLE + Q++ E CS++ET V YVRGVAV LGKT
Sbjct: 498 KVDSMDKGDNTQMTEKLDRTVSLEHQL--QSNDTSEPPCSTTETTKVKYVRGVAVPLGKT 555
Query: 230 RTLVECWEKRERSS 271
++LVE WEKRE ++
Sbjct: 556 KSLVERWEKREATN 569
>gb|EEC71594.1| hypothetical protein OsI_03978 [Oryza sativa Indica Group]
Length = 843
Score = 60.8 bits (146), Expect = 2e-07
Identities = 32/74 (43%), Positives = 45/74 (60%)
Frame = +2
Query: 50 ETDKREHDKTRDIARDFERVVSLEQPVHSQNDHCEELTCSSSETKSVTYVRGVAVQLGKT 229
+ D + + +R VSLE + Q++ E CS++ET V YVRGVAV LGKT
Sbjct: 582 KVDSMDKGDNTQMTEKLDRTVSLEHQL--QSNDTSEPPCSTTETTKVKYVRGVAVPLGKT 639
Query: 230 RTLVECWEKRERSS 271
++LVE WEKRE ++
Sbjct: 640 KSLVERWEKREATN 653
>gb|EMS68408.1| Katanin p80 WD40 repeat-containing subunit B1-like protein 1
[Triticum urartu]
Length = 905
Score = 58.2 bits (139), Expect = 1e-06
Identities = 38/108 (35%), Positives = 50/108 (46%), Gaps = 29/108 (26%)
Frame = +2
Query: 35 NHDAAETDKREHDKTRDIARDFERVVSLEQPVHSQNDH---------------------- 148
N E+D + + R IA +R+VS + PV S +D
Sbjct: 608 NDKKEESDSTDKGEIRQIAEKMDRIVSFDHPVQSNDDKGIALSLFLSIQALRFCSFWEFN 667
Query: 149 -------CEELTCSSSETKSVTYVRGVAVQLGKTRTLVECWEKRERSS 271
E CS++ T V YVRGVAV LGKT++LVE +EKRE SS
Sbjct: 668 IIALFTAAYESPCSTTGTARVKYVRGVAVPLGKTKSLVERFEKRESSS 715
>gb|EMT11460.1| hypothetical protein F775_05157 [Aegilops tauschii]
Length = 838
Score = 57.4 bits (137), Expect = 2e-06
Identities = 38/108 (35%), Positives = 50/108 (46%), Gaps = 29/108 (26%)
Frame = +2
Query: 35 NHDAAETDKREHDKTRDIARDFERVVSLEQPVHSQNDH---------------------- 148
N E+D + + R IA +R+VS + PV S +D
Sbjct: 541 NDKKEESDGTDKGEIRQIAEKMDRIVSFDHPVQSNDDKGIALSLFLSIQVLRFCSFWEFN 600
Query: 149 -------CEELTCSSSETKSVTYVRGVAVQLGKTRTLVECWEKRERSS 271
E CS++ T V YVRGVAV LGKT++LVE +EKRE SS
Sbjct: 601 IIALFTAAYESPCSTTGTARVKYVRGVAVPLGKTKSLVERFEKRESSS 648
>ref|XP_002456444.1| hypothetical protein SORBIDRAFT_03g036400 [Sorghum bicolor]
gi|241928419|gb|EES01564.1| hypothetical protein
SORBIDRAFT_03g036400 [Sorghum bicolor]
Length = 838
Score = 56.2 bits (134), Expect = 4e-06
Identities = 27/40 (67%), Positives = 32/40 (80%)
Frame = +2
Query: 155 ELTCSSSETKSVTYVRGVAVQLGKTRTLVECWEKRERSSS 274
E CS++ET V YVRGVAV LGKT++LVE WEKRE SS+
Sbjct: 556 ESPCSTTETAKVKYVRGVAVPLGKTKSLVERWEKRESSST 595
>ref|XP_006377307.1| hypothetical protein POPTR_0011s04530g [Populus trichocarpa]
gi|550327580|gb|ERP55104.1| hypothetical protein
POPTR_0011s04530g [Populus trichocarpa]
Length = 990
Score = 55.5 bits (132), Expect = 7e-06
Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 5/116 (4%)
Frame = +2
Query: 44 AAETDKREHDKTRDIARDFERVVSLEQPVHSQNDHCEELTCSSSETKSVTYVRGVAVQLG 223
A ++ +++ + + FE+V+S E P +C+E SS E V V GVAV G
Sbjct: 501 AQKSHEKKSPSIKGVTEKFEKVLSPETP---NQGNCDESVKSSKEIAPVKIVNGVAVVSG 557
Query: 224 KTRTLVECWEKRERSSSGNRKGLLLHDEQKESEQSSERHLS-----ISEVDFSPET 376
+TR+LVE +E+RE+ SS +++ H ES ++S + IS D +P T
Sbjct: 558 RTRSLVERFERREKLSSEDQELNTSHQAVPESNRTSTTETNPTPPVISGTDRTPVT 613