BLASTX nr result

ID: Zingiber23_contig00048630 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00048630
         (406 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABY86891.1| K+ channel protein [Populus euphratica]                 62   6e-08
emb|CAC87141.1| K+ channel protein [Populus tremula x Populus tr...    61   1e-07

>gb|ABY86891.1| K+ channel protein [Populus euphratica]
          Length = 746

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 46/150 (30%), Positives = 65/150 (43%), Gaps = 17/150 (11%)
 Frame = -2

Query: 402  QTVSDGTIKEGHHEAAKTLLKQETTIDKVNGNRWTQKDMAKKHEPKG------------- 262
            +T     + EGH E  K LL    +I+K +   WT K +A++   K              
Sbjct: 563  ETALHAAVCEGHVEMVKILLDGGASINKPDARGWTPKALAEQQGNKSIHDLLLNYENRNI 622

Query: 261  ---GASDFLMRDGSGKTFVGEQDLRYSCSLKNNDEMLQTCS-KIGVHESAKRVVIHMHSQ 94
                  DF+  +  G T   +     + +L N+   +  C       +S KRV IHM  Q
Sbjct: 623  LNEHRIDFIESETVGDTKKSQGKHEGNKALTNSSSCISRCPLDREAKKSTKRVTIHMQLQ 682

Query: 93   KADPAIQLMPKMINLPDTMEELLRIGGEKF 4
                    + K+I LPD+MEELLRI GEKF
Sbjct: 683  NRSTLQSRLGKLIILPDSMEELLRIAGEKF 712


>emb|CAC87141.1| K+ channel protein [Populus tremula x Populus tremuloides]
          Length = 751

 Score = 61.2 bits (147), Expect = 1e-07
 Identities = 45/150 (30%), Positives = 64/150 (42%), Gaps = 17/150 (11%)
 Frame = -2

Query: 402  QTVSDGTIKEGHHEAAKTLLKQETTIDKVNGNRWTQKDMAKKHEPKG------------- 262
            +T     + EGH E  K LL+    I+K +   WT K +A++   K              
Sbjct: 568  ETALHAAVCEGHVEMVKILLEGGANINKPDARGWTPKALAEQQGNKSIHDLLLNYENRNI 627

Query: 261  ---GASDFLMRDGSGKTFVGEQDLRYSCSLKNNDEMLQTCSKI-GVHESAKRVVIHMHSQ 94
                  DF+  +  G T   ++    + +L N    +  C       +S KRV IH   Q
Sbjct: 628  LNEHRIDFIESETVGDTKKSQEKHEGNKALTNYSSCISRCPHDRDAKKSTKRVTIHRQLQ 687

Query: 93   KADPAIQLMPKMINLPDTMEELLRIGGEKF 4
                    + K+I LPD+MEELLRI GEKF
Sbjct: 688  NRSTLQSRLGKLIILPDSMEELLRIAGEKF 717


Top