BLASTX nr result

ID: Zingiber23_contig00048480 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00048480
         (556 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEP04146.1| histone deacetylase 6 [Musa acuminata AAA Group]        60   5e-07
gb|AEZ00857.1| putative histone deacyltylase protein, partial [E...    58   1e-06
gb|AHA85938.1| histone deacetylase 6 [Arachis hypogaea]                57   3e-06
ref|XP_006578653.1| PREDICTED: histone deacetylase 6-like isofor...    55   9e-06
ref|XP_003523097.1| PREDICTED: histone deacetylase 6-like isofor...    55   9e-06

>gb|AEP04146.1| histone deacetylase 6 [Musa acuminata AAA Group]
          Length = 415

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 28/45 (62%), Positives = 30/45 (66%)
 Frame = -1

Query: 556 REDATIAINWADGLHHAKKCEASDFCYXXXXXXXXXXXLKYHRKL 422
           R DA IAINWA GLHHAKKCEAS FCY           LKYHR++
Sbjct: 113 RGDADIAINWAGGLHHAKKCEASGFCYVNDIVLGILELLKYHRRV 157


>gb|AEZ00857.1| putative histone deacyltylase protein, partial [Elaeis guineensis]
          Length = 291

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/45 (60%), Positives = 30/45 (66%)
 Frame = -1

Query: 556 REDATIAINWADGLHHAKKCEASDFCYXXXXXXXXXXXLKYHRKL 422
           R DA IAINWA GLHHAKKCEAS FCY           LK+HR++
Sbjct: 102 RGDADIAINWAGGLHHAKKCEASGFCYVNDIVLGILELLKFHRRV 146


>gb|AHA85938.1| histone deacetylase 6 [Arachis hypogaea]
          Length = 466

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/45 (57%), Positives = 30/45 (66%)
 Frame = -1

Query: 556 REDATIAINWADGLHHAKKCEASDFCYXXXXXXXXXXXLKYHRKL 422
           R+DA IA+NWA GLHHAKK EAS FCY           LKYHR++
Sbjct: 139 RQDADIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLKYHRRV 183


>ref|XP_006578653.1| PREDICTED: histone deacetylase 6-like isoform X2 [Glycine max]
          Length = 465

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 26/45 (57%), Positives = 29/45 (64%)
 Frame = -1

Query: 556 REDATIAINWADGLHHAKKCEASDFCYXXXXXXXXXXXLKYHRKL 422
           REDA +AINWA GLHHAKK EAS FCY           LK HR++
Sbjct: 146 REDADVAINWAGGLHHAKKAEASGFCYVNDIVLGILELLKVHRRV 190


>ref|XP_003523097.1| PREDICTED: histone deacetylase 6-like isoform X1 [Glycine max]
          Length = 464

 Score = 55.5 bits (132), Expect = 9e-06
 Identities = 26/45 (57%), Positives = 29/45 (64%)
 Frame = -1

Query: 556 REDATIAINWADGLHHAKKCEASDFCYXXXXXXXXXXXLKYHRKL 422
           REDA +AINWA GLHHAKK EAS FCY           LK HR++
Sbjct: 146 REDADVAINWAGGLHHAKKAEASGFCYVNDIVLGILELLKVHRRV 190


Top