BLASTX nr result
ID: Zingiber23_contig00048409
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00048409
(278 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004981392.1| PREDICTED: pentatricopeptide repeat-containi... 125 6e-27
ref|XP_003573921.1| PREDICTED: pentatricopeptide repeat-containi... 124 1e-26
ref|XP_002466267.1| hypothetical protein SORBIDRAFT_01g004770 [S... 124 2e-26
gb|EMS51146.1| hypothetical protein TRIUR3_09018 [Triticum urartu] 120 1e-25
tpg|DAA51987.1| TPA: hypothetical protein ZEAMMB73_709752 [Zea m... 120 2e-25
ref|NP_001170755.1| uncharacterized protein LOC100384848 [Zea ma... 120 2e-25
ref|XP_006653103.1| PREDICTED: pentatricopeptide repeat-containi... 120 2e-25
ref|NP_001052029.1| Os04g0110500 [Oryza sativa Japonica Group] g... 119 3e-25
gb|EAY92795.1| hypothetical protein OsI_14599 [Oryza sativa Indi... 117 2e-24
emb|CAH67783.1| H0201G08.10 [Oryza sativa Indica Group] 117 2e-24
emb|CBI17926.3| unnamed protein product [Vitis vinifera] 116 4e-24
emb|CAN60259.1| hypothetical protein VITISV_007741 [Vitis vinifera] 116 4e-24
ref|XP_006656565.1| PREDICTED: pentatricopeptide repeat-containi... 99 6e-19
ref|NP_001174568.1| Os06g0114366 [Oryza sativa Japonica Group] g... 98 1e-18
gb|EAZ35598.1| hypothetical protein OsJ_19887 [Oryza sativa Japo... 98 1e-18
ref|XP_004506535.1| PREDICTED: pentatricopeptide repeat-containi... 96 6e-18
gb|EXB93290.1| hypothetical protein L484_015277 [Morus notabilis] 92 7e-17
ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 92 9e-17
ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containi... 92 9e-17
gb|EMT12728.1| hypothetical protein F775_23075 [Aegilops tauschii] 91 1e-16
>ref|XP_004981392.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Setaria italica]
Length = 457
Score = 125 bits (314), Expect = 6e-27
Identities = 58/87 (66%), Positives = 67/87 (77%)
Frame = +2
Query: 17 KANRLTFSIILSACASIGALDTGIWLHAYLGSIIFNSDGSLDHCLIDMYAKCGSIEKAMQ 196
+ N T S +L+ACA G L+TGIW+HAY+ N DGSLD LIDMYAKCGSIEKA+Q
Sbjct: 178 RPNGPTMSTVLAACAGAGCLETGIWVHAYIDRNRLNDDGSLDRSLIDMYAKCGSIEKALQ 237
Query: 197 VFESKPVRRDLYSWTSAICGLAMHGRA 277
VFE P +RDLYSWT+ ICGLAMHGRA
Sbjct: 238 VFEKAPGKRDLYSWTTVICGLAMHGRA 264
>ref|XP_003573921.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Brachypodium distachyon]
Length = 531
Score = 124 bits (311), Expect = 1e-26
Identities = 56/85 (65%), Positives = 66/85 (77%)
Frame = +2
Query: 23 NRLTFSIILSACASIGALDTGIWLHAYLGSIIFNSDGSLDHCLIDMYAKCGSIEKAMQVF 202
N T S +LSACA G L+TGIW+H Y+ N +G+LD CLIDMYAKCGSI+KA+QVF
Sbjct: 250 NGPTMSTVLSACAGAGCLETGIWVHLYIDKNQMNDNGTLDRCLIDMYAKCGSIDKALQVF 309
Query: 203 ESKPVRRDLYSWTSAICGLAMHGRA 277
E P +RDLYSWT+ ICGLAMHGRA
Sbjct: 310 EKAPGKRDLYSWTTVICGLAMHGRA 334
>ref|XP_002466267.1| hypothetical protein SORBIDRAFT_01g004770 [Sorghum bicolor]
gi|241920121|gb|EER93265.1| hypothetical protein
SORBIDRAFT_01g004770 [Sorghum bicolor]
Length = 537
Score = 124 bits (310), Expect = 2e-26
Identities = 57/85 (67%), Positives = 66/85 (77%)
Frame = +2
Query: 23 NRLTFSIILSACASIGALDTGIWLHAYLGSIIFNSDGSLDHCLIDMYAKCGSIEKAMQVF 202
N T S +L+ACA G L+TGIW+HAY+ N DGSLD LIDMYAKCGSIEKA+QVF
Sbjct: 257 NGPTISTVLAACAGAGCLETGIWVHAYIDRNRMNDDGSLDRSLIDMYAKCGSIEKALQVF 316
Query: 203 ESKPVRRDLYSWTSAICGLAMHGRA 277
E P +RDLYSWT+ ICGLAMHG+A
Sbjct: 317 EKAPGKRDLYSWTTVICGLAMHGKA 341
>gb|EMS51146.1| hypothetical protein TRIUR3_09018 [Triticum urartu]
Length = 424
Score = 120 bits (302), Expect = 1e-25
Identities = 54/85 (63%), Positives = 65/85 (76%)
Frame = +2
Query: 23 NRLTFSIILSACASIGALDTGIWLHAYLGSIIFNSDGSLDHCLIDMYAKCGSIEKAMQVF 202
N T S +L AC + G L+TGIW+HAY+ N +G+LD CLIDMYAKCGSI+ A+QVF
Sbjct: 143 NGPTMSTVLGACGAAGCLETGIWVHAYIDKNRMNHNGTLDRCLIDMYAKCGSIDTALQVF 202
Query: 203 ESKPVRRDLYSWTSAICGLAMHGRA 277
E P +RDLYSWT+ ICGLAMHGRA
Sbjct: 203 EKAPGKRDLYSWTTVICGLAMHGRA 227
>tpg|DAA51987.1| TPA: hypothetical protein ZEAMMB73_709752 [Zea mays]
Length = 536
Score = 120 bits (301), Expect = 2e-25
Identities = 56/85 (65%), Positives = 64/85 (75%)
Frame = +2
Query: 23 NRLTFSIILSACASIGALDTGIWLHAYLGSIIFNSDGSLDHCLIDMYAKCGSIEKAMQVF 202
N T S +L+ACA G L+TGIW+HA++ N DGSLD LIDMY KCGSIEKA+QVF
Sbjct: 256 NGPTMSTVLAACAGAGCLETGIWVHAFVDRNRMNDDGSLDRSLIDMYVKCGSIEKALQVF 315
Query: 203 ESKPVRRDLYSWTSAICGLAMHGRA 277
E P RDLYSWT+ ICGLAMHGRA
Sbjct: 316 EKAPEARDLYSWTTMICGLAMHGRA 340
>ref|NP_001170755.1| uncharacterized protein LOC100384848 [Zea mays]
gi|238007354|gb|ACR34712.1| unknown [Zea mays]
Length = 464
Score = 120 bits (301), Expect = 2e-25
Identities = 56/85 (65%), Positives = 64/85 (75%)
Frame = +2
Query: 23 NRLTFSIILSACASIGALDTGIWLHAYLGSIIFNSDGSLDHCLIDMYAKCGSIEKAMQVF 202
N T S +L+ACA G L+TGIW+HA++ N DGSLD LIDMY KCGSIEKA+QVF
Sbjct: 184 NGPTMSTVLAACAGAGCLETGIWVHAFVDRNRMNDDGSLDRSLIDMYVKCGSIEKALQVF 243
Query: 203 ESKPVRRDLYSWTSAICGLAMHGRA 277
E P RDLYSWT+ ICGLAMHGRA
Sbjct: 244 EKAPEARDLYSWTTMICGLAMHGRA 268
>ref|XP_006653103.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Oryza brachyantha]
Length = 527
Score = 120 bits (300), Expect = 2e-25
Identities = 55/82 (67%), Positives = 62/82 (75%)
Frame = +2
Query: 32 TFSIILSACASIGALDTGIWLHAYLGSIIFNSDGSLDHCLIDMYAKCGSIEKAMQVFESK 211
T S IL ACA G L+TGIWLHAY+ N DG LD CLIDMY KCGSIE A+QVFE
Sbjct: 249 TISTILGACADAGCLETGIWLHAYIERNSMNDDGCLDRCLIDMYCKCGSIENALQVFEKA 308
Query: 212 PVRRDLYSWTSAICGLAMHGRA 277
P +RDL+SWT+ ICGLAM+GRA
Sbjct: 309 PRKRDLFSWTTVICGLAMNGRA 330
>ref|NP_001052029.1| Os04g0110500 [Oryza sativa Japonica Group]
gi|38345581|emb|CAE01779.2| OSJNBa0027H06.17 [Oryza
sativa Japonica Group] gi|113563600|dbj|BAF13943.1|
Os04g0110500 [Oryza sativa Japonica Group]
gi|125589117|gb|EAZ29467.1| hypothetical protein
OsJ_13541 [Oryza sativa Japonica Group]
gi|215736988|dbj|BAG95917.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 531
Score = 119 bits (299), Expect = 3e-25
Identities = 54/82 (65%), Positives = 62/82 (75%)
Frame = +2
Query: 32 TFSIILSACASIGALDTGIWLHAYLGSIIFNSDGSLDHCLIDMYAKCGSIEKAMQVFESK 211
T S IL ACA G L+TGIW+HAY+ N DG LD CLIDMY KCGSI+ A+QVFE
Sbjct: 253 TMSTILGACAGAGCLETGIWVHAYIERNRMNDDGYLDRCLIDMYCKCGSIDNALQVFEKA 312
Query: 212 PVRRDLYSWTSAICGLAMHGRA 277
P +RDL+SWT+ ICGLAMHGRA
Sbjct: 313 PRKRDLFSWTTVICGLAMHGRA 334
>gb|EAY92795.1| hypothetical protein OsI_14599 [Oryza sativa Indica Group]
Length = 530
Score = 117 bits (292), Expect = 2e-24
Identities = 52/81 (64%), Positives = 61/81 (75%)
Frame = +2
Query: 32 TFSIILSACASIGALDTGIWLHAYLGSIIFNSDGSLDHCLIDMYAKCGSIEKAMQVFESK 211
T S IL ACA G L+TGIW+HAY+ N DG LD CLIDMY KCGSI+ A+QVFE
Sbjct: 252 TMSTILGACAGAGCLETGIWVHAYIERNRMNDDGYLDRCLIDMYCKCGSIDNALQVFEKA 311
Query: 212 PVRRDLYSWTSAICGLAMHGR 274
P ++DL+SWT+ ICGLAMHGR
Sbjct: 312 PRKKDLFSWTTVICGLAMHGR 332
>emb|CAH67783.1| H0201G08.10 [Oryza sativa Indica Group]
Length = 530
Score = 117 bits (292), Expect = 2e-24
Identities = 52/81 (64%), Positives = 61/81 (75%)
Frame = +2
Query: 32 TFSIILSACASIGALDTGIWLHAYLGSIIFNSDGSLDHCLIDMYAKCGSIEKAMQVFESK 211
T S IL ACA G L+TGIW+HAY+ N DG LD CLIDMY KCGSI+ A+QVFE
Sbjct: 252 TMSTILGACAGAGCLETGIWVHAYIERNRMNDDGYLDRCLIDMYCKCGSIDNALQVFEKA 311
Query: 212 PVRRDLYSWTSAICGLAMHGR 274
P ++DL+SWT+ ICGLAMHGR
Sbjct: 312 PRKKDLFSWTTVICGLAMHGR 332
>emb|CBI17926.3| unnamed protein product [Vitis vinifera]
Length = 602
Score = 116 bits (290), Expect = 4e-24
Identities = 56/90 (62%), Positives = 66/90 (73%)
Frame = +2
Query: 5 FSSEKANRLTFSIILSACASIGALDTGIWLHAYLGSIIFNSDGSLDHCLIDMYAKCGSIE 184
FS N LT LSACAS GALDTG W+HAY+ N DGSLD LIDMY+KCG I+
Sbjct: 317 FSGVSPNALTLLSTLSACASHGALDTGAWIHAYVDKNDMNRDGSLDSSLIDMYSKCGDID 376
Query: 185 KAMQVFESKPVRRDLYSWTSAICGLAMHGR 274
KA+Q+FE + RRDL++WTS +CGLAMHGR
Sbjct: 377 KAVQIFE-ESTRRDLFTWTSIVCGLAMHGR 405
>emb|CAN60259.1| hypothetical protein VITISV_007741 [Vitis vinifera]
Length = 602
Score = 116 bits (290), Expect = 4e-24
Identities = 56/90 (62%), Positives = 66/90 (73%)
Frame = +2
Query: 5 FSSEKANRLTFSIILSACASIGALDTGIWLHAYLGSIIFNSDGSLDHCLIDMYAKCGSIE 184
FS N LT LSACAS GALDTG W+HAY+ N DGSLD LIDMY+KCG I+
Sbjct: 317 FSGVSPNALTLLSTLSACASHGALDTGAWIHAYVDKNDMNRDGSLDSSLIDMYSKCGDID 376
Query: 185 KAMQVFESKPVRRDLYSWTSAICGLAMHGR 274
KA+Q+FE + RRDL++WTS +CGLAMHGR
Sbjct: 377 KAVQIFE-ESTRRDLFTWTSIVCGLAMHGR 405
>ref|XP_006656565.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Oryza brachyantha]
Length = 521
Score = 99.0 bits (245), Expect = 6e-19
Identities = 44/81 (54%), Positives = 64/81 (79%)
Frame = +2
Query: 32 TFSIILSACASIGALDTGIWLHAYLGSIIFNSDGSLDHCLIDMYAKCGSIEKAMQVFESK 211
TF +L ACA +GALDTG WLHAY+G + ++DG + + L+DMYAKCG++++A +VF++
Sbjct: 257 TFVAVLGACAQLGALDTGRWLHAYMGRLGHSADGVIGNALLDMYAKCGAVDQASEVFDAM 316
Query: 212 PVRRDLYSWTSAICGLAMHGR 274
RRD+Y++TS I GLA+HGR
Sbjct: 317 S-RRDVYTYTSMILGLAIHGR 336
>ref|NP_001174568.1| Os06g0114366 [Oryza sativa Japonica Group]
gi|218197444|gb|EEC79871.1| hypothetical protein
OsI_21372 [Oryza sativa Indica Group]
gi|255676656|dbj|BAH93296.1| Os06g0114366 [Oryza sativa
Japonica Group]
Length = 509
Score = 98.2 bits (243), Expect = 1e-18
Identities = 45/81 (55%), Positives = 62/81 (76%)
Frame = +2
Query: 32 TFSIILSACASIGALDTGIWLHAYLGSIIFNSDGSLDHCLIDMYAKCGSIEKAMQVFESK 211
TF L ACA +GALDTG WLHAY+G + ++DG + + L+DMYAKCG++++A +VF+
Sbjct: 257 TFVAALGACAQLGALDTGRWLHAYMGRMGHSADGVVGNALLDMYAKCGAVDQATEVFDGM 316
Query: 212 PVRRDLYSWTSAICGLAMHGR 274
RRD+Y++TS I GLAMHGR
Sbjct: 317 -ARRDVYTYTSMILGLAMHGR 336
>gb|EAZ35598.1| hypothetical protein OsJ_19887 [Oryza sativa Japonica Group]
Length = 495
Score = 98.2 bits (243), Expect = 1e-18
Identities = 45/81 (55%), Positives = 62/81 (76%)
Frame = +2
Query: 32 TFSIILSACASIGALDTGIWLHAYLGSIIFNSDGSLDHCLIDMYAKCGSIEKAMQVFESK 211
TF L ACA +GALDTG WLHAY+G + ++DG + + L+DMYAKCG++++A +VF+
Sbjct: 243 TFVAALGACAQLGALDTGRWLHAYMGRMGHSADGVVGNALLDMYAKCGAVDQATEVFDGM 302
Query: 212 PVRRDLYSWTSAICGLAMHGR 274
RRD+Y++TS I GLAMHGR
Sbjct: 303 -ARRDVYTYTSMILGLAMHGR 322
>ref|XP_004506535.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cicer arietinum]
Length = 675
Score = 95.5 bits (236), Expect = 6e-18
Identities = 45/90 (50%), Positives = 63/90 (70%)
Frame = +2
Query: 8 SSEKANRLTFSIILSACASIGALDTGIWLHAYLGSIIFNSDGSLDHCLIDMYAKCGSIEK 187
S + +++T LSAC+ +GALD GIW+H Y+G + D +L L+DMYAKCG+I K
Sbjct: 387 SKVEPDKVTMVNCLSACSQLGALDVGIWIHRYIGIHNISLDVALGTALVDMYAKCGNISK 446
Query: 188 AMQVFESKPVRRDLYSWTSAICGLAMHGRA 277
A+QVFE P +R+ +WT+ ICGLA+HG A
Sbjct: 447 ALQVFEEIP-QRNCLTWTAIICGLALHGNA 475
>gb|EXB93290.1| hypothetical protein L484_015277 [Morus notabilis]
Length = 684
Score = 92.0 bits (227), Expect = 7e-17
Identities = 42/87 (48%), Positives = 62/87 (71%)
Frame = +2
Query: 17 KANRLTFSIILSACASIGALDTGIWLHAYLGSIIFNSDGSLDHCLIDMYAKCGSIEKAMQ 196
+ + +T LSAC+ +GALD GIW+H Y+ I +S+ +L L+DMY+KCG+I+KA+Q
Sbjct: 382 RPDEITMVGCLSACSQLGALDIGIWIHRYIEKHIVSSNVALGTALVDMYSKCGNIKKALQ 441
Query: 197 VFESKPVRRDLYSWTSAICGLAMHGRA 277
VF+ P R + +WT+ ICGLA+HG A
Sbjct: 442 VFQEMPGRNSV-TWTAIICGLAVHGHA 467
>ref|XP_004154678.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At2g22410, mitochondrial-like [Cucumis sativus]
Length = 681
Score = 91.7 bits (226), Expect = 9e-17
Identities = 44/89 (49%), Positives = 61/89 (68%)
Frame = +2
Query: 8 SSEKANRLTFSIILSACASIGALDTGIWLHAYLGSIIFNSDGSLDHCLIDMYAKCGSIEK 187
SS +++T LSAC+ +GALD GIW+H Y+ + +L L+DMYAKCG+I+K
Sbjct: 382 SSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKK 441
Query: 188 AMQVFESKPVRRDLYSWTSAICGLAMHGR 274
A+QVFE P R L +WT+ ICGLA+HG+
Sbjct: 442 AIQVFEEMPGRNSL-TWTAIICGLALHGQ 469
>ref|XP_004139112.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Cucumis sativus]
Length = 681
Score = 91.7 bits (226), Expect = 9e-17
Identities = 44/89 (49%), Positives = 61/89 (68%)
Frame = +2
Query: 8 SSEKANRLTFSIILSACASIGALDTGIWLHAYLGSIIFNSDGSLDHCLIDMYAKCGSIEK 187
SS +++T LSAC+ +GALD GIW+H Y+ + +L L+DMYAKCG+I+K
Sbjct: 382 SSVAPDKITVVNCLSACSQLGALDVGIWMHHYVDKHNLTMNVALGTALVDMYAKCGNIKK 441
Query: 188 AMQVFESKPVRRDLYSWTSAICGLAMHGR 274
A+QVFE P R L +WT+ ICGLA+HG+
Sbjct: 442 AIQVFEEMPGRNSL-TWTAIICGLALHGQ 469
>gb|EMT12728.1| hypothetical protein F775_23075 [Aegilops tauschii]
Length = 286
Score = 91.3 bits (225), Expect = 1e-16
Identities = 45/82 (54%), Positives = 61/82 (74%), Gaps = 1/82 (1%)
Frame = +2
Query: 32 TFSIILSACASIGALDTGIWLHAYLGSIIFN-SDGSLDHCLIDMYAKCGSIEKAMQVFES 208
TF +L ACA +GALD G W+HAY+G + +DG + + LIDMYAKCG++E+A VF++
Sbjct: 17 TFVAVLGACARLGALDAGRWVHAYMGRTGRDAADGVVGNALIDMYAKCGAVEQAADVFDA 76
Query: 209 KPVRRDLYSWTSAICGLAMHGR 274
RRD+Y++TS I GLAMHGR
Sbjct: 77 M-TRRDVYTYTSMIWGLAMHGR 97