BLASTX nr result

ID: Zingiber23_contig00048175 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00048175
         (406 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265433.2| PREDICTED: uncharacterized protein LOC100262...    61   2e-07
ref|XP_002279496.2| PREDICTED: uncharacterized protein LOC100260...    58   1e-06
ref|XP_002279514.1| PREDICTED: uncharacterized protein LOC100260...    58   1e-06
emb|CBI37628.3| unnamed protein product [Vitis vinifera]               58   1e-06
emb|CAN60620.1| hypothetical protein VITISV_006169 [Vitis vinifera]    58   1e-06
ref|XP_002329469.1| predicted protein [Populus trichocarpa] gi|5...    57   3e-06
ref|XP_002300207.1| hypothetical protein POPTR_0001s31510g [Popu...    57   3e-06
ref|XP_002530078.1| conserved hypothetical protein [Ricinus comm...    56   4e-06
gb|EXB36907.1| hypothetical protein L484_016512 [Morus notabilis]      56   6e-06
ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymera...    56   6e-06
ref|XP_006581749.1| PREDICTED: probable mediator of RNA polymera...    55   1e-05
ref|XP_006581748.1| PREDICTED: probable mediator of RNA polymera...    55   1e-05
gb|ESW09677.1| hypothetical protein PHAVU_009G146900g [Phaseolus...    55   1e-05
ref|XP_003526847.1| PREDICTED: probable mediator of RNA polymera...    55   1e-05

>ref|XP_002265433.2| PREDICTED: uncharacterized protein LOC100262291 [Vitis vinifera]
           gi|296081186|emb|CBI18212.3| unnamed protein product
           [Vitis vinifera]
          Length = 332

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 28/34 (82%), Positives = 30/34 (88%)
 Frame = -2

Query: 405 IGRHVNNH*KHPSNKV*QLVKQLVRKWKDLVDEW 304
           IGRHVN   KHPSN+V +LVKQLVRKWKDLVDEW
Sbjct: 145 IGRHVNRLRKHPSNEVRRLVKQLVRKWKDLVDEW 178


>ref|XP_002279496.2| PREDICTED: uncharacterized protein LOC100260896 isoform 1 [Vitis
           vinifera]
          Length = 331

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/34 (79%), Positives = 28/34 (82%)
 Frame = -2

Query: 405 IGRHVNNH*KHPSNKV*QLVKQLVRKWKDLVDEW 304
           IGRHVN   KHPSN V +LVK LVRKWKDLVDEW
Sbjct: 150 IGRHVNRLRKHPSNDVRRLVKHLVRKWKDLVDEW 183


>ref|XP_002279514.1| PREDICTED: uncharacterized protein LOC100260896 isoform 2 [Vitis
           vinifera]
          Length = 305

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/34 (79%), Positives = 28/34 (82%)
 Frame = -2

Query: 405 IGRHVNNH*KHPSNKV*QLVKQLVRKWKDLVDEW 304
           IGRHVN   KHPSN V +LVK LVRKWKDLVDEW
Sbjct: 150 IGRHVNRLRKHPSNDVRRLVKHLVRKWKDLVDEW 183


>emb|CBI37628.3| unnamed protein product [Vitis vinifera]
          Length = 332

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/34 (79%), Positives = 28/34 (82%)
 Frame = -2

Query: 405 IGRHVNNH*KHPSNKV*QLVKQLVRKWKDLVDEW 304
           IGRHVN   KHPSN V +LVK LVRKWKDLVDEW
Sbjct: 150 IGRHVNRLRKHPSNDVRRLVKHLVRKWKDLVDEW 183


>emb|CAN60620.1| hypothetical protein VITISV_006169 [Vitis vinifera]
          Length = 333

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 27/34 (79%), Positives = 28/34 (82%)
 Frame = -2

Query: 405 IGRHVNNH*KHPSNKV*QLVKQLVRKWKDLVDEW 304
           IGRHVN   KHPSN V +LVK LVRKWKDLVDEW
Sbjct: 150 IGRHVNRLRKHPSNDVRRLVKHLVRKWKDLVDEW 183


>ref|XP_002329469.1| predicted protein [Populus trichocarpa]
           gi|566223086|ref|XP_006370923.1| hypothetical protein
           POPTR_0019s01790g [Populus trichocarpa]
           gi|550316504|gb|ERP48720.1| hypothetical protein
           POPTR_0019s01790g [Populus trichocarpa]
          Length = 357

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/34 (73%), Positives = 29/34 (85%)
 Frame = -2

Query: 405 IGRHVNNH*KHPSNKV*QLVKQLVRKWKDLVDEW 304
           IGRHVN   KHPSN V +LVKQLVRKWK++VD+W
Sbjct: 167 IGRHVNRLRKHPSNDVRRLVKQLVRKWKEIVDDW 200


>ref|XP_002300207.1| hypothetical protein POPTR_0001s31510g [Populus trichocarpa]
           gi|222847465|gb|EEE85012.1| hypothetical protein
           POPTR_0001s31510g [Populus trichocarpa]
          Length = 361

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/34 (73%), Positives = 29/34 (85%)
 Frame = -2

Query: 405 IGRHVNNH*KHPSNKV*QLVKQLVRKWKDLVDEW 304
           IGRHVN   KHPSN V +LVKQLVRKWK++VD+W
Sbjct: 167 IGRHVNRLRKHPSNDVKRLVKQLVRKWKEIVDDW 200


>ref|XP_002530078.1| conserved hypothetical protein [Ricinus communis]
           gi|223530431|gb|EEF32318.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 362

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/34 (76%), Positives = 28/34 (82%)
 Frame = -2

Query: 405 IGRHVNNH*KHPSNKV*QLVKQLVRKWKDLVDEW 304
           IGRHVN   KH SN V +LVKQLVRKWKD+VDEW
Sbjct: 171 IGRHVNQLRKHTSNDVRRLVKQLVRKWKDIVDEW 204


>gb|EXB36907.1| hypothetical protein L484_016512 [Morus notabilis]
          Length = 418

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/34 (73%), Positives = 29/34 (85%)
 Frame = -2

Query: 405 IGRHVNNH*KHPSNKV*QLVKQLVRKWKDLVDEW 304
           IGRHVN   KHPS++V +LVKQ+VRKWKD VDEW
Sbjct: 151 IGRHVNRLRKHPSSEVKRLVKQVVRKWKDTVDEW 184


>ref|XP_004141981.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c-like [Cucumis sativus]
           gi|449528150|ref|XP_004171069.1| PREDICTED: probable
           mediator of RNA polymerase II transcription subunit
           26c-like [Cucumis sativus]
          Length = 345

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/34 (73%), Positives = 28/34 (82%)
 Frame = -2

Query: 405 IGRHVNNH*KHPSNKV*QLVKQLVRKWKDLVDEW 304
           IGRHVN   KHPSN V +LVK LVRKWK++VDEW
Sbjct: 158 IGRHVNRLRKHPSNDVRRLVKHLVRKWKEIVDEW 191


>ref|XP_006581749.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c-like isoform X3 [Glycine max]
          Length = 359

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/34 (73%), Positives = 28/34 (82%)
 Frame = -2

Query: 405 IGRHVNNH*KHPSNKV*QLVKQLVRKWKDLVDEW 304
           IGRHVN   KHPSN V +LVK LVRKWK++VDEW
Sbjct: 167 IGRHVNRLRKHPSNDVRRLVKLLVRKWKEIVDEW 200


>ref|XP_006581748.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c-like isoform X2 [Glycine max]
          Length = 360

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/34 (73%), Positives = 28/34 (82%)
 Frame = -2

Query: 405 IGRHVNNH*KHPSNKV*QLVKQLVRKWKDLVDEW 304
           IGRHVN   KHPSN V +LVK LVRKWK++VDEW
Sbjct: 167 IGRHVNRLRKHPSNDVRRLVKLLVRKWKEIVDEW 200


>gb|ESW09677.1| hypothetical protein PHAVU_009G146900g [Phaseolus vulgaris]
          Length = 353

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/34 (73%), Positives = 28/34 (82%)
 Frame = -2

Query: 405 IGRHVNNH*KHPSNKV*QLVKQLVRKWKDLVDEW 304
           IGRHVN   KHPSN V +LVK LVRKWK++VDEW
Sbjct: 167 IGRHVNRLRKHPSNDVRRLVKLLVRKWKEIVDEW 200


>ref|XP_003526847.1| PREDICTED: probable mediator of RNA polymerase II transcription
           subunit 26c-like isoform X1 [Glycine max]
          Length = 361

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 25/34 (73%), Positives = 28/34 (82%)
 Frame = -2

Query: 405 IGRHVNNH*KHPSNKV*QLVKQLVRKWKDLVDEW 304
           IGRHVN   KHPSN V +LVK LVRKWK++VDEW
Sbjct: 167 IGRHVNRLRKHPSNDVRRLVKLLVRKWKEIVDEW 200


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