BLASTX nr result
ID: Zingiber23_contig00048129
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00048129
(277 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002892635.1| pentatricopeptide repeat-containing protein ... 89 8e-16
ref|NP_172596.1| pentatricopeptide repeat-containing protein [Ar... 88 1e-15
ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containi... 87 2e-15
ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containi... 87 2e-15
gb|EOY19557.1| Pentatricopeptide repeat (PPR) superfamily protei... 86 4e-15
ref|XP_004308197.1| PREDICTED: pentatricopeptide repeat-containi... 86 4e-15
gb|EMJ21454.1| hypothetical protein PRUPE_ppa001444mg [Prunus pe... 86 4e-15
ref|XP_006393717.1| hypothetical protein EUTSA_v10011247mg [Eutr... 86 7e-15
ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containi... 85 9e-15
ref|XP_004499782.1| PREDICTED: pentatricopeptide repeat-containi... 85 1e-14
ref|XP_006304494.1| hypothetical protein CARUB_v10011264mg [Caps... 85 1e-14
ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group] g... 84 1e-14
ref|XP_006653155.1| PREDICTED: pentatricopeptide repeat-containi... 84 1e-14
ref|XP_004966592.1| PREDICTED: pentatricopeptide repeat-containi... 84 1e-14
gb|EMT22530.1| hypothetical protein F775_10484 [Aegilops tauschii] 84 1e-14
gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japo... 84 1e-14
gb|EAY99379.1| hypothetical protein OsI_21347 [Oryza sativa Indi... 84 1e-14
gb|ESW20787.1| hypothetical protein PHAVU_005G014800g [Phaseolus... 84 3e-14
gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays] 83 3e-14
gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygr... 83 4e-14
>ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297338477|gb|EFH68894.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 809
Score = 88.6 bits (218), Expect = 8e-16
Identities = 38/43 (88%), Positives = 39/43 (90%)
Frame = -1
Query: 277 RVCRDLHNATKFISQVTGREIIVRDMQRFHHFKNGRCSCGDYW 149
RVC D HNATK+IS VTGREIIVRDMQRFHHFKNG CSCGDYW
Sbjct: 767 RVCADCHNATKYISLVTGREIIVRDMQRFHHFKNGACSCGDYW 809
>ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g11290 gi|332190592|gb|AEE28713.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 809
Score = 88.2 bits (217), Expect = 1e-15
Identities = 37/43 (86%), Positives = 39/43 (90%)
Frame = -1
Query: 277 RVCRDLHNATKFISQVTGREIIVRDMQRFHHFKNGRCSCGDYW 149
RVC D HNATK+IS VTGREI+VRDMQRFHHFKNG CSCGDYW
Sbjct: 767 RVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
>ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 87.4 bits (215), Expect = 2e-15
Identities = 38/43 (88%), Positives = 39/43 (90%)
Frame = -1
Query: 277 RVCRDLHNATKFISQVTGREIIVRDMQRFHHFKNGRCSCGDYW 149
RVC D HNATK+IS VTGREIIVRDMQRFHHFKNG CSCGDYW
Sbjct: 779 RVCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821
>ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cucumis sativus]
Length = 821
Score = 87.4 bits (215), Expect = 2e-15
Identities = 38/43 (88%), Positives = 39/43 (90%)
Frame = -1
Query: 277 RVCRDLHNATKFISQVTGREIIVRDMQRFHHFKNGRCSCGDYW 149
RVC D HNATK+IS VTGREIIVRDMQRFHHFKNG CSCGDYW
Sbjct: 779 RVCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821
>gb|EOY19557.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao]
Length = 886
Score = 86.3 bits (212), Expect = 4e-15
Identities = 37/43 (86%), Positives = 38/43 (88%)
Frame = -1
Query: 277 RVCRDLHNATKFISQVTGREIIVRDMQRFHHFKNGRCSCGDYW 149
RVC D HNATK+IS VTGREIIVRDM RFHHFKNG CSCGDYW
Sbjct: 844 RVCGDCHNATKYISLVTGREIIVRDMHRFHHFKNGTCSCGDYW 886
>ref|XP_004308197.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Fragaria vesca subsp. vesca]
Length = 827
Score = 86.3 bits (212), Expect = 4e-15
Identities = 37/43 (86%), Positives = 38/43 (88%)
Frame = -1
Query: 277 RVCRDLHNATKFISQVTGREIIVRDMQRFHHFKNGRCSCGDYW 149
RVC D HNATK+IS VTGREIIVRDM RFHHFKNG CSCGDYW
Sbjct: 785 RVCGDCHNATKYISLVTGREIIVRDMHRFHHFKNGTCSCGDYW 827
>gb|EMJ21454.1| hypothetical protein PRUPE_ppa001444mg [Prunus persica]
Length = 827
Score = 86.3 bits (212), Expect = 4e-15
Identities = 37/43 (86%), Positives = 38/43 (88%)
Frame = -1
Query: 277 RVCRDLHNATKFISQVTGREIIVRDMQRFHHFKNGRCSCGDYW 149
RVC D HNATK+IS VTGREIIVRDM RFHHFKNG CSCGDYW
Sbjct: 785 RVCGDCHNATKYISLVTGREIIVRDMHRFHHFKNGTCSCGDYW 827
>ref|XP_006393717.1| hypothetical protein EUTSA_v10011247mg [Eutrema salsugineum]
gi|557090295|gb|ESQ31003.1| hypothetical protein
EUTSA_v10011247mg [Eutrema salsugineum]
Length = 807
Score = 85.5 bits (210), Expect = 7e-15
Identities = 37/43 (86%), Positives = 38/43 (88%)
Frame = -1
Query: 277 RVCRDLHNATKFISQVTGREIIVRDMQRFHHFKNGRCSCGDYW 149
RVC D HNATK+IS VTGREIIVRDMQRFHHFK G CSCGDYW
Sbjct: 765 RVCADCHNATKYISLVTGREIIVRDMQRFHHFKYGACSCGDYW 807
>ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Brachypodium distachyon]
Length = 900
Score = 85.1 bits (209), Expect = 9e-15
Identities = 35/43 (81%), Positives = 40/43 (93%)
Frame = -1
Query: 277 RVCRDLHNATKFISQVTGREIIVRDMQRFHHFKNGRCSCGDYW 149
RVC+D HNATK IS VTGREII+RD+QRFHHFK+G+CSCGDYW
Sbjct: 858 RVCKDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 900
>ref|XP_004499782.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Cicer arietinum]
Length = 814
Score = 84.7 bits (208), Expect = 1e-14
Identities = 36/43 (83%), Positives = 38/43 (88%)
Frame = -1
Query: 277 RVCRDLHNATKFISQVTGREIIVRDMQRFHHFKNGRCSCGDYW 149
RVC D H ATK+IS VTGREIIVRD+QRFHHFKNG CSCGDYW
Sbjct: 772 RVCGDCHEATKYISLVTGREIIVRDLQRFHHFKNGSCSCGDYW 814
>ref|XP_006304494.1| hypothetical protein CARUB_v10011264mg [Capsella rubella]
gi|482573205|gb|EOA37392.1| hypothetical protein
CARUB_v10011264mg [Capsella rubella]
Length = 811
Score = 84.7 bits (208), Expect = 1e-14
Identities = 37/43 (86%), Positives = 38/43 (88%)
Frame = -1
Query: 277 RVCRDLHNATKFISQVTGREIIVRDMQRFHHFKNGRCSCGDYW 149
RVC D HNATK+IS VT REIIVRDMQRFHHFKNG CSCGDYW
Sbjct: 769 RVCADCHNATKYISLVTRREIIVRDMQRFHHFKNGVCSCGDYW 811
>ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR)
repeat-containing protein-like [Oryza sativa Japonica
Group] gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza
sativa Japonica Group] gi|215737111|dbj|BAG96040.1|
unnamed protein product [Oryza sativa Japonica Group]
Length = 734
Score = 84.3 bits (207), Expect = 1e-14
Identities = 35/43 (81%), Positives = 39/43 (90%)
Frame = -1
Query: 277 RVCRDLHNATKFISQVTGREIIVRDMQRFHHFKNGRCSCGDYW 149
RVC D HNATK IS VTGREII+RD+QRFHHFK+G+CSCGDYW
Sbjct: 692 RVCNDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 734
>ref|XP_006653155.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Oryza brachyantha]
Length = 744
Score = 84.3 bits (207), Expect = 1e-14
Identities = 35/43 (81%), Positives = 39/43 (90%)
Frame = -1
Query: 277 RVCRDLHNATKFISQVTGREIIVRDMQRFHHFKNGRCSCGDYW 149
RVC D HNATK IS VTGREII+RD+QRFHHFK+G+CSCGDYW
Sbjct: 702 RVCNDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 744
>ref|XP_004966592.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g11290-like [Setaria italica]
Length = 737
Score = 84.3 bits (207), Expect = 1e-14
Identities = 35/43 (81%), Positives = 39/43 (90%)
Frame = -1
Query: 277 RVCRDLHNATKFISQVTGREIIVRDMQRFHHFKNGRCSCGDYW 149
RVC D HNATK IS VTGREII+RD+QRFHHFK+G+CSCGDYW
Sbjct: 695 RVCNDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 737
>gb|EMT22530.1| hypothetical protein F775_10484 [Aegilops tauschii]
Length = 590
Score = 84.3 bits (207), Expect = 1e-14
Identities = 35/43 (81%), Positives = 39/43 (90%)
Frame = -1
Query: 277 RVCRDLHNATKFISQVTGREIIVRDMQRFHHFKNGRCSCGDYW 149
RVC D HNATK IS VTGREII+RD+QRFHHFK+G+CSCGDYW
Sbjct: 548 RVCNDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 590
>gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
Length = 734
Score = 84.3 bits (207), Expect = 1e-14
Identities = 35/43 (81%), Positives = 39/43 (90%)
Frame = -1
Query: 277 RVCRDLHNATKFISQVTGREIIVRDMQRFHHFKNGRCSCGDYW 149
RVC D HNATK IS VTGREII+RD+QRFHHFK+G+CSCGDYW
Sbjct: 692 RVCNDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 734
>gb|EAY99379.1| hypothetical protein OsI_21347 [Oryza sativa Indica Group]
Length = 484
Score = 84.3 bits (207), Expect = 1e-14
Identities = 35/43 (81%), Positives = 39/43 (90%)
Frame = -1
Query: 277 RVCRDLHNATKFISQVTGREIIVRDMQRFHHFKNGRCSCGDYW 149
RVC D HNATK IS VTGREII+RD+QRFHHFK+G+CSCGDYW
Sbjct: 442 RVCNDCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 484
>gb|ESW20787.1| hypothetical protein PHAVU_005G014800g [Phaseolus vulgaris]
Length = 807
Score = 83.6 bits (205), Expect = 3e-14
Identities = 35/43 (81%), Positives = 38/43 (88%)
Frame = -1
Query: 277 RVCRDLHNATKFISQVTGREIIVRDMQRFHHFKNGRCSCGDYW 149
RVC D H ATK+IS VTGREIIVRD++RFHHFKNG CSCGDYW
Sbjct: 765 RVCGDCHEATKYISLVTGREIIVRDLRRFHHFKNGNCSCGDYW 807
>gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
Length = 693
Score = 83.2 bits (204), Expect = 3e-14
Identities = 34/43 (79%), Positives = 39/43 (90%)
Frame = -1
Query: 277 RVCRDLHNATKFISQVTGREIIVRDMQRFHHFKNGRCSCGDYW 149
RVC D HNATK IS +TGREII+RD+QRFHHFK+G+CSCGDYW
Sbjct: 651 RVCNDCHNATKLISLLTGREIIMRDIQRFHHFKDGKCSCGDYW 693
>gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
Length = 820
Score = 82.8 bits (203), Expect = 4e-14
Identities = 34/43 (79%), Positives = 36/43 (83%)
Frame = -1
Query: 277 RVCRDLHNATKFISQVTGREIIVRDMQRFHHFKNGRCSCGDYW 149
RVC D H ATKFIS++TGREII RD RFHHFKNG CSCGDYW
Sbjct: 778 RVCTDCHTATKFISKITGREIIARDAHRFHHFKNGECSCGDYW 820