BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00048053
         (1098 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containi...   117   1e-23
ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containi...   114   7e-23
emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]   112   2e-22
ref|XP_002267026.2| PREDICTED: pentatricopeptide repeat-containi...   112   3e-22
emb|CBI35666.3| unnamed protein product [Vitis vinifera]              112   3e-22
ref|XP_002512657.1| pentatricopeptide repeat-containing protein,...   109   2e-21
ref|XP_002873605.1| pentatricopeptide repeat-containing protein ...   108   4e-21
gb|EOX99645.1| Pentatricopeptide repeat (PPR) superfamily protei...   105   4e-20
gb|ESW29077.1| hypothetical protein PHAVU_002G041500g [Phaseolus...   102   2e-19
ref|NP_196831.1| protein required for accD RNA editing 1 [Arabid...   101   5e-19
ref|XP_006399818.1| hypothetical protein EUTSA_v10012768mg [Eutr...   100   8e-19
ref|XP_004310241.1| PREDICTED: pentatricopeptide repeat-containi...   100   8e-19
ref|XP_006844488.1| hypothetical protein AMTR_s00016p00115350 [A...    97   1e-17
ref|XP_006290013.1| hypothetical protein CARUB_v10003644mg [Caps...    95   6e-17
ref|XP_004969881.1| PREDICTED: pentatricopeptide repeat-containi...    89   3e-15
ref|XP_006483319.1| PREDICTED: pentatricopeptide repeat-containi...    88   7e-15
ref|XP_006450490.1| hypothetical protein CICLE_v10007521mg [Citr...    88   7e-15
gb|EPS68237.1| hypothetical protein M569_06531 [Genlisea aurea]        88   7e-15
ref|XP_006368854.1| hypothetical protein POPTR_0001s13120g [Popu...    87   9e-15
gb|EMJ26812.1| hypothetical protein PRUPE_ppa003215mg [Prunus pe...    86   3e-14

>ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
            chloroplastic-like [Glycine max]
          Length = 765

 Score =  117 bits (292), Expect = 1e-23
 Identities = 59/138 (42%), Positives = 83/138 (60%)
 Frame = +2

Query: 683  QHQNGRLESVHLLSLANHGRFNEAREFLDLMDSSGISIKRHVYQSLFTACGISKSINDGR 862
            Q+Q G++E++HL+SLA  G   E  EF+  MD  GISI    Y+ LF  CG   +++DG+
Sbjct: 53   QNQQGQVENLHLISLAKQGNLREVHEFIRNMDKVGISINPRSYEYLFKMCGTLGALSDGK 112

Query: 863  FFHNHMMKKIGSKDLNTSIADCLLKMYVRCLGFDDAYRVFHKMSNKMLSSWNIMISGFVH 1042
             FHN + +   S   N  I +C+LKMY  C  F  A R F K+ ++ LSSW+ +IS +  
Sbjct: 113  LFHNRLQRMANS---NKFIDNCILKMYCDCKSFTSAERFFDKIVDQDLSSWSTIISAYTE 169

Query: 1043 NGHLQEALDLFLRMKDEG 1096
             G + EA+ LFLRM D G
Sbjct: 170  EGRIDEAVRLFLRMLDLG 187


>ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
            chloroplastic-like [Glycine max]
          Length = 753

 Score =  114 bits (285), Expect = 7e-23
 Identities = 57/138 (41%), Positives = 84/138 (60%)
 Frame = +2

Query: 683  QHQNGRLESVHLLSLANHGRFNEAREFLDLMDSSGISIKRHVYQSLFTACGISKSINDGR 862
            Q+Q G++E++HL+SLA  G+  +  EF+  MD +GISI    Y+ LF  CG   +++DG+
Sbjct: 41   QNQQGQVENLHLISLAKQGKLRQVHEFIRNMDIAGISINPRSYEYLFKMCGTLGALSDGK 100

Query: 863  FFHNHMMKKIGSKDLNTSIADCLLKMYVRCLGFDDAYRVFHKMSNKMLSSWNIMISGFVH 1042
             FHN + +   S   N  I +C+L+MY  C  F  A R F K+ ++ LSSW  +IS +  
Sbjct: 101  LFHNRLQRMANS---NKFIDNCILQMYCDCKSFTAAERFFDKIVDRDLSSWATIISAYTE 157

Query: 1043 NGHLQEALDLFLRMKDEG 1096
             G + EA+ LFLRM D G
Sbjct: 158  EGRIDEAVGLFLRMLDLG 175


>emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
          Length = 734

 Score =  112 bits (281), Expect = 2e-22
 Identities = 57/136 (41%), Positives = 85/136 (62%)
 Frame = +2

Query: 689  QNGRLESVHLLSLANHGRFNEAREFLDLMDSSGISIKRHVYQSLFTACGISKSINDGRFF 868
            Q G+LE++HL+SL+  G+  EA +FL  MD + +S+  H YQ LF ACG  +S+ DGR  
Sbjct: 50   QQGKLENLHLVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLI 109

Query: 869  HNHMMKKIGSKDLNTSIADCLLKMYVRCLGFDDAYRVFHKMSNKMLSSWNIMISGFVHNG 1048
            H+ + + +  K+ + SI +CLL+MY  C    D  +VF +M  K L SW I+IS +  NG
Sbjct: 110  HDRLRRTV--KNPSGSIENCLLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNG 167

Query: 1049 HLQEALDLFLRMKDEG 1096
             L++A+ LF  M+  G
Sbjct: 168  ELEKAIRLFSDMQASG 183



 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 31/115 (26%), Positives = 57/115 (49%)
 Frame = +2

Query: 752  AREFLDLMDSSGISIKRHVYQSLFTACGISKSINDGRFFHNHMMKKIGSKDLNTSIADCL 931
            A E    M   G+ +   V+  +   C   +  + G+  H+H++K     +   S+   L
Sbjct: 273  ALELFARMAMEGVELDEFVFSIVLKVCCXLEDWDMGKQIHSHIVKL--GXESEVSVGTPL 330

Query: 932  LKMYVRCLGFDDAYRVFHKMSNKMLSSWNIMISGFVHNGHLQEALDLFLRMKDEG 1096
            +  YV+C   + AYR F ++S     SW+ +ISGF  +G L++ + +F  ++ EG
Sbjct: 331  VDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEG 385



 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 35/130 (26%), Positives = 59/130 (45%)
 Frame = +2

Query: 707  SVHLLSLANHGRFNEAREFLDLMDSSGISIKRHVYQSLFTACGISKSINDGRFFHNHMMK 886
            S  +   +  GR  +  +    + S G+ +   +Y S+F AC    ++N G   H   +K
Sbjct: 359  SALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIK 418

Query: 887  KIGSKDLNTSIADCLLKMYVRCLGFDDAYRVFHKMSNKMLSSWNIMISGFVHNGHLQEAL 1066
            +     L    A  ++ MY +C   D A R F  +      +W  +ISG+ ++G+  EAL
Sbjct: 419  RGLVSYLYGESA--MVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEAL 476

Query: 1067 DLFLRMKDEG 1096
              F RM+  G
Sbjct: 477  GFFRRMQSYG 486



 Score = 58.5 bits (140), Expect = 4e-06
 Identities = 36/123 (29%), Positives = 58/123 (47%)
 Frame = +2

Query: 728  ANHGRFNEAREFLDLMDSSGISIKRHVYQSLFTACGISKSINDGRFFHNHMMKKIGSKDL 907
            A +G   +A      M +SGI     VY SL  +C     +  G+  H+H+++     + 
Sbjct: 164  AKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQMHSHVIR--AQLNA 221

Query: 908  NTSIADCLLKMYVRCLGFDDAYRVFHKMSNKMLSSWNIMISGFVHNGHLQEALDLFLRMK 1087
            N ++   +  MYVRC   + A  VF  M  +   +W  ++ G+     L+ AL+LF RM 
Sbjct: 222  NITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMA 281

Query: 1088 DEG 1096
             EG
Sbjct: 282  MEG 284


>ref|XP_002267026.2| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
            chloroplastic-like [Vitis vinifera]
          Length = 835

 Score =  112 bits (280), Expect = 3e-22
 Identities = 57/136 (41%), Positives = 85/136 (62%)
 Frame = +2

Query: 689  QNGRLESVHLLSLANHGRFNEAREFLDLMDSSGISIKRHVYQSLFTACGISKSINDGRFF 868
            Q G+LE++HL+SL+  G+  EA +FL  MD + +S+  H YQ LF ACG  +S+ DGR  
Sbjct: 50   QQGKLENLHLVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLI 109

Query: 869  HNHMMKKIGSKDLNTSIADCLLKMYVRCLGFDDAYRVFHKMSNKMLSSWNIMISGFVHNG 1048
            H+ + + +  K+ + SI +CLL+MY  C    D  +VF +M  K L SW I+IS +  NG
Sbjct: 110  HDRLRRTV--KNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNG 167

Query: 1049 HLQEALDLFLRMKDEG 1096
             L++A+ LF  M+  G
Sbjct: 168  ELEKAIRLFSDMQASG 183



 Score = 61.2 bits (147), Expect = 7e-07
 Identities = 33/115 (28%), Positives = 60/115 (52%)
 Frame = +2

Query: 752  AREFLDLMDSSGISIKRHVYQSLFTACGISKSINDGRFFHNHMMKKIGSKDLNTSIADCL 931
            A E    M   G+ +   V+  +   C   +  + GR  H+H++K +G++    S+   L
Sbjct: 273  ALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVK-LGAES-EVSVGTPL 330

Query: 932  LKMYVRCLGFDDAYRVFHKMSNKMLSSWNIMISGFVHNGHLQEALDLFLRMKDEG 1096
            +  YV+C   + AYR F ++S     SW+ +ISGF  +G L++ + +F  ++ EG
Sbjct: 331  VDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEG 385



 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 35/130 (26%), Positives = 59/130 (45%)
 Frame = +2

Query: 707  SVHLLSLANHGRFNEAREFLDLMDSSGISIKRHVYQSLFTACGISKSINDGRFFHNHMMK 886
            S  +   +  GR  +  +    + S G+ +   +Y S+F AC    ++N G   H   +K
Sbjct: 359  SALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIK 418

Query: 887  KIGSKDLNTSIADCLLKMYVRCLGFDDAYRVFHKMSNKMLSSWNIMISGFVHNGHLQEAL 1066
            +     L    A  ++ MY +C   D A R F  +      +W  +ISG+ ++G+  EAL
Sbjct: 419  RGLVSYLYGESA--MVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEAL 476

Query: 1067 DLFLRMKDEG 1096
              F RM+  G
Sbjct: 477  GFFRRMQSYG 486



 Score = 58.5 bits (140), Expect = 4e-06
 Identities = 36/123 (29%), Positives = 58/123 (47%)
 Frame = +2

Query: 728  ANHGRFNEAREFLDLMDSSGISIKRHVYQSLFTACGISKSINDGRFFHNHMMKKIGSKDL 907
            A +G   +A      M +SGI     VY SL  +C     +  G+  H+H+++     + 
Sbjct: 164  AKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIR--AQLNA 221

Query: 908  NTSIADCLLKMYVRCLGFDDAYRVFHKMSNKMLSSWNIMISGFVHNGHLQEALDLFLRMK 1087
            N ++   +  MYVRC   + A  VF  M  +   +W  ++ G+     L+ AL+LF RM 
Sbjct: 222  NITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMA 281

Query: 1088 DEG 1096
             EG
Sbjct: 282  MEG 284


>emb|CBI35666.3| unnamed protein product [Vitis vinifera]
          Length = 762

 Score =  112 bits (280), Expect = 3e-22
 Identities = 57/136 (41%), Positives = 85/136 (62%)
 Frame = +2

Query: 689  QNGRLESVHLLSLANHGRFNEAREFLDLMDSSGISIKRHVYQSLFTACGISKSINDGRFF 868
            Q G+LE++HL+SL+  G+  EA +FL  MD + +S+  H YQ LF ACG  +S+ DGR  
Sbjct: 50   QQGKLENLHLVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLI 109

Query: 869  HNHMMKKIGSKDLNTSIADCLLKMYVRCLGFDDAYRVFHKMSNKMLSSWNIMISGFVHNG 1048
            H+ + + +  K+ + SI +CLL+MY  C    D  +VF +M  K L SW I+IS +  NG
Sbjct: 110  HDRLRRTV--KNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNG 167

Query: 1049 HLQEALDLFLRMKDEG 1096
             L++A+ LF  M+  G
Sbjct: 168  ELEKAIRLFSDMQASG 183



 Score = 61.2 bits (147), Expect = 7e-07
 Identities = 33/115 (28%), Positives = 60/115 (52%)
 Frame = +2

Query: 752  AREFLDLMDSSGISIKRHVYQSLFTACGISKSINDGRFFHNHMMKKIGSKDLNTSIADCL 931
            A E    M   G+ +   V+  +   C   +  + GR  H+H++K +G++    S+   L
Sbjct: 273  ALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVK-LGAES-EVSVGTPL 330

Query: 932  LKMYVRCLGFDDAYRVFHKMSNKMLSSWNIMISGFVHNGHLQEALDLFLRMKDEG 1096
            +  YV+C   + AYR F ++S     SW+ +ISGF  +G L++ + +F  ++ EG
Sbjct: 331  VDFYVKCGDIESAYRSFGRISEPNDVSWSALISGFSQSGRLEDCIKIFTSLRSEG 385



 Score = 58.9 bits (141), Expect = 3e-06
 Identities = 35/130 (26%), Positives = 59/130 (45%)
 Frame = +2

Query: 707  SVHLLSLANHGRFNEAREFLDLMDSSGISIKRHVYQSLFTACGISKSINDGRFFHNHMMK 886
            S  +   +  GR  +  +    + S G+ +   +Y S+F AC    ++N G   H   +K
Sbjct: 359  SALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIK 418

Query: 887  KIGSKDLNTSIADCLLKMYVRCLGFDDAYRVFHKMSNKMLSSWNIMISGFVHNGHLQEAL 1066
            +     L    A  ++ MY +C   D A R F  +      +W  +ISG+ ++G+  EAL
Sbjct: 419  RGLVSYLYGESA--MVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNAAEAL 476

Query: 1067 DLFLRMKDEG 1096
              F RM+  G
Sbjct: 477  GFFRRMQSYG 486



 Score = 58.5 bits (140), Expect = 4e-06
 Identities = 36/123 (29%), Positives = 58/123 (47%)
 Frame = +2

Query: 728  ANHGRFNEAREFLDLMDSSGISIKRHVYQSLFTACGISKSINDGRFFHNHMMKKIGSKDL 907
            A +G   +A      M +SGI     VY SL  +C     +  G+  H+H+++     + 
Sbjct: 164  AKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIR--AQLNA 221

Query: 908  NTSIADCLLKMYVRCLGFDDAYRVFHKMSNKMLSSWNIMISGFVHNGHLQEALDLFLRMK 1087
            N ++   +  MYVRC   + A  VF  M  +   +W  ++ G+     L+ AL+LF RM 
Sbjct: 222  NITVETAICNMYVRCGWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAKKLEVALELFARMA 281

Query: 1088 DEG 1096
             EG
Sbjct: 282  MEG 284


>ref|XP_002512657.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223548618|gb|EEF50109.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 837

 Score =  109 bits (272), Expect = 2e-21
 Identities = 54/134 (40%), Positives = 85/134 (63%)
 Frame = +2

Query: 683  QHQNGRLESVHLLSLANHGRFNEAREFLDLMDSSGISIKRHVYQSLFTACGISKSINDGR 862
            Q++ G++E+VHL+SL+  G+  EAREFL  M  +GIS+    Y++LF  CG SKS++DG+
Sbjct: 51   QNRKGQVENVHLVSLSKQGKLKEAREFLKQMVDAGISVSPDSYRNLFEICGNSKSLSDGK 110

Query: 863  FFHNHMMKKIGSKDLNTSIADCLLKMYVRCLGFDDAYRVFHKMSNKMLSSWNIMISGFVH 1042
              H  + + +  +  +  + + +LKMY  C   +DAY+VF KM  + L SW  +IS +  
Sbjct: 111  IIHELLRRTV--EKPSVFLENTVLKMYCVCESLEDAYKVFDKMIERNLISWGTIISAYAE 168

Query: 1043 NGHLQEALDLFLRM 1084
            +G L +AL LF+ M
Sbjct: 169  HGLLDKALSLFISM 182


>ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297319442|gb|EFH49864.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 750

 Score =  108 bits (270), Expect = 4e-21
 Identities = 53/137 (38%), Positives = 86/137 (62%)
 Frame = +2

Query: 686  HQNGRLESVHLLSLANHGRFNEAREFLDLMDSSGISIKRHVYQSLFTACGISKSINDGRF 865
            H+ G++E++HL+SL+ HG+ NEA EF   MD +G+S+  + YQ LF AC   +S++ GR 
Sbjct: 43   HKQGQVENLHLVSLSKHGKLNEAFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLSHGRL 102

Query: 866  FHNHMMKKIGSKDLNTSIADCLLKMYVRCLGFDDAYRVFHKMSNKMLSSWNIMISGFVHN 1045
             HN M  ++G ++ +  + +C+L+MY  C   +DA ++F +MS+    S   MIS +   
Sbjct: 103  LHNRM--RMGIENPSVLLQNCVLQMYCECGSLEDADKLFDEMSDLNAVSRTTMISAYAEQ 160

Query: 1046 GHLQEALDLFLRMKDEG 1096
            G L +A+ LF RM + G
Sbjct: 161  GLLDKAVGLFSRMLESG 177



 Score = 62.0 bits (149), Expect = 4e-07
 Identities = 39/118 (33%), Positives = 59/118 (50%), Gaps = 3/118 (2%)
 Frame = +2

Query: 740  RFNEA-REFLDLMDSSGISIKRHVYQSLFTACGISKSINDGRFFHNHMMKK--IGSKDLN 910
            +F EA + F  L   + + +    Y S+F AC +    N G   H   +K+  IGS+   
Sbjct: 364  QFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGE 423

Query: 911  TSIADCLLKMYVRCLGFDDAYRVFHKMSNKMLSSWNIMISGFVHNGHLQEALDLFLRM 1084
            ++    L+ MY +C   DDA+ VF  M N  + +W   ISG  + G+  EAL LF +M
Sbjct: 424  SA----LITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKM 477


>gb|EOX99645.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma cacao]
          Length = 762

 Score =  105 bits (261), Expect = 4e-20
 Identities = 50/136 (36%), Positives = 85/136 (62%)
 Frame = +2

Query: 689  QNGRLESVHLLSLANHGRFNEAREFLDLMDSSGISIKRHVYQSLFTACGISKSINDGRFF 868
            Q G++E+VHL+SL+   +  EAR+FL  M+ +G+ +  H Y+SL   C   +S++DG+  
Sbjct: 51   QQGQVENVHLVSLSKQRKLKEARDFLKQMEEAGVPVNPHSYKSLLETCSKVRSLSDGKLI 110

Query: 869  HNHMMKKIGSKDLNTSIADCLLKMYVRCLGFDDAYRVFHKMSNKMLSSWNIMISGFVHNG 1048
            HNH+ + +  K+ +  + + LL+MY+ C  F  A ++F KM  K L+SW I+IS +   G
Sbjct: 111  HNHLRRTM--KNPSGFLENSLLQMYLDCESFLHAEKLFDKMIEKTLASWIILISAYSQKG 168

Query: 1049 HLQEALDLFLRMKDEG 1096
            HL++   L+ +M + G
Sbjct: 169  HLKKTFSLYSQMVELG 184



 Score = 57.8 bits (138), Expect = 8e-06
 Identities = 35/120 (29%), Positives = 55/120 (45%)
 Frame = +2

Query: 737  GRFNEAREFLDLMDSSGISIKRHVYQSLFTACGISKSINDGRFFHNHMMKKIGSKDLNTS 916
            G+F ++ +    +    +S+   VY S+F AC +    N G   H   +K+     L   
Sbjct: 370  GKFEKSLKIFKSLRIKDVSLNSFVYTSIFQACSVLADFNVGAQVHADSIKRGLISYLYGE 429

Query: 917  IADCLLKMYVRCLGFDDAYRVFHKMSNKMLSSWNIMISGFVHNGHLQEALDLFLRMKDEG 1096
             A  ++ MY +C   D A R F  +      +W   I G  ++G+  EAL LF RM+D G
Sbjct: 430  SA--MITMYSKCGRLDYANRAFESIDEPDTVAWTANICGHAYHGNASEALRLFRRMQDSG 487


>gb|ESW29077.1| hypothetical protein PHAVU_002G041500g [Phaseolus vulgaris]
          Length = 765

 Score =  102 bits (255), Expect = 2e-19
 Identities = 53/137 (38%), Positives = 78/137 (56%)
 Frame = +2

Query: 686  HQNGRLESVHLLSLANHGRFNEAREFLDLMDSSGISIKRHVYQSLFTACGISKSINDGRF 865
            ++ G +E++HL+SL   G+  E  EF++ MD  GISI    Y+ LF  CG  +++ DGR 
Sbjct: 54   NKQGEVENLHLISLTKQGKVREVHEFIERMDREGISINLQSYEYLFKMCGRLRALPDGRL 113

Query: 866  FHNHMMKKIGSKDLNTSIADCLLKMYVRCLGFDDAYRVFHKMSNKMLSSWNIMISGFVHN 1045
            FH+ + +   S   N  I +C+L+M+  C  F  A R F KM ++ L SW  +IS +   
Sbjct: 114  FHSRLQRISNS---NRFIDNCILQMHCDCKSFAAAERFFDKMVDRDLFSWATIISAYTKE 170

Query: 1046 GHLQEALDLFLRMKDEG 1096
            GH  EA+ L L M D G
Sbjct: 171  GHTYEAVRLLLHMLDLG 187


>ref|NP_196831.1| protein required for accD RNA editing 1 [Arabidopsis thaliana]
            gi|75181128|sp|Q9LYU9.1|PP378_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At5g13270, chloroplastic; Flags: Precursor
            gi|7529282|emb|CAB86634.1| putative protein [Arabidopsis
            thaliana] gi|332004490|gb|AED91873.1| protein required
            for accD RNA editing 1 [Arabidopsis thaliana]
          Length = 752

 Score =  101 bits (252), Expect = 5e-19
 Identities = 51/137 (37%), Positives = 83/137 (60%)
 Frame = +2

Query: 686  HQNGRLESVHLLSLANHGRFNEAREFLDLMDSSGISIKRHVYQSLFTACGISKSINDGRF 865
            H+ G++E++HL+SL+ H + NEA EFL  MD +G+S+  + YQ LF AC   +S++ GR 
Sbjct: 45   HKQGQVENLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRL 104

Query: 866  FHNHMMKKIGSKDLNTSIADCLLKMYVRCLGFDDAYRVFHKMSNKMLSSWNIMISGFVHN 1045
             H+ M  ++G ++ +  + +C+L+MY  C   +DA ++F +MS     S   MIS +   
Sbjct: 105  LHDRM--RMGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQ 162

Query: 1046 GHLQEALDLFLRMKDEG 1096
            G L +A+ LF  M   G
Sbjct: 163  GILDKAVGLFSGMLASG 179



 Score = 58.5 bits (140), Expect = 4e-06
 Identities = 39/118 (33%), Positives = 57/118 (48%), Gaps = 3/118 (2%)
 Frame = +2

Query: 740  RFNEA-REFLDLMDSSGISIKRHVYQSLFTACGISKSINDGRFFHNHMMKK--IGSKDLN 910
            +F EA + F  L   +   +    Y S+F AC +    N G   H   +K+  IGS+   
Sbjct: 366  QFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGE 425

Query: 911  TSIADCLLKMYVRCLGFDDAYRVFHKMSNKMLSSWNIMISGFVHNGHLQEALDLFLRM 1084
            ++    L+ MY +C   DDA  VF  M N  + +W   ISG  + G+  EAL LF +M
Sbjct: 426  SA----LITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKM 479


>ref|XP_006399818.1| hypothetical protein EUTSA_v10012768mg [Eutrema salsugineum]
            gi|557100908|gb|ESQ41271.1| hypothetical protein
            EUTSA_v10012768mg [Eutrema salsugineum]
          Length = 750

 Score =  100 bits (250), Expect = 8e-19
 Identities = 51/138 (36%), Positives = 84/138 (60%)
 Frame = +2

Query: 683  QHQNGRLESVHLLSLANHGRFNEAREFLDLMDSSGISIKRHVYQSLFTACGISKSINDGR 862
            +H+ G++E++HL+SL+ HG+ NEA EF   MD +G+SI  + YQ LF AC  S+S++ GR
Sbjct: 42   EHKQGQVENLHLVSLSKHGKLNEAFEFFQEMDKAGVSISPYSYQCLFEACRESRSLSHGR 101

Query: 863  FFHNHMMKKIGSKDLNTSIADCLLKMYVRCLGFDDAYRVFHKMSNKMLSSWNIMISGFVH 1042
              H+ M  +   ++ +  + +C+L+MY  C   +DA ++F +M      S   MIS +  
Sbjct: 102  LLHHRM--RTAFENPSVLLQNCVLQMYCGCGSLEDADKLFDEMPELNTVSRVTMISAYAE 159

Query: 1043 NGHLQEALDLFLRMKDEG 1096
             G L++A+ LF  M + G
Sbjct: 160  QGLLEKAVGLFSGMLESG 177



 Score = 60.8 bits (146), Expect = 9e-07
 Identities = 39/118 (33%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
 Frame = +2

Query: 740  RFNEA-REFLDLMDSSGISIKRHVYQSLFTACGISKSINDGRFFHNHMMKK--IGSKDLN 910
            +F EA + F  L   +   +    Y S+F AC +    N G   H   +K+  IGS+   
Sbjct: 364  QFEEAIKTFKSLRSKNAAVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGE 423

Query: 911  TSIADCLLKMYVRCLGFDDAYRVFHKMSNKMLSSWNIMISGFVHNGHLQEALDLFLRM 1084
            ++    L+ MY +C   DDA+ VF  M N  + +W   ISG  + G+  EAL LF +M
Sbjct: 424  SA----LITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNASEALKLFEKM 477


>ref|XP_004310241.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
            chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 837

 Score =  100 bits (250), Expect = 8e-19
 Identities = 55/139 (39%), Positives = 82/139 (58%), Gaps = 1/139 (0%)
 Frame = +2

Query: 683  QH-QNGRLESVHLLSLANHGRFNEAREFLDLMDSSGISIKRHVYQSLFTACGISKSINDG 859
            QH Q G++E+VHL+SL+  G+  EAREFL  M+ +G+++    Y+ LF  CG+    +DG
Sbjct: 54   QHIQTGQVENVHLVSLSKQGKMKEAREFLKQMNEAGVAVTAQSYRCLFEKCGLMGYFSDG 113

Query: 860  RFFHNHMMKKIGSKDLNTSIADCLLKMYVRCLGFDDAYRVFHKMSNKMLSSWNIMISGFV 1039
            +F H  +   +  K     + +  LKMY  C    DA +VF +M  + L SW IMIS +V
Sbjct: 114  KFIHEWLRSTV--KSPAEFLENDALKMYCDCGSLRDAQKVFDEMRGRDLVSWVIMISAYV 171

Query: 1040 HNGHLQEALDLFLRMKDEG 1096
             +G L +A+ LFL M + G
Sbjct: 172  ESGVLSKAVGLFLDMLECG 190



 Score = 67.0 bits (162), Expect = 1e-08
 Identities = 36/121 (29%), Positives = 60/121 (49%)
 Frame = +2

Query: 734  HGRFNEAREFLDLMDSSGISIKRHVYQSLFTACGISKSINDGRFFHNHMMKKIGSKDLNT 913
            +G+F E  E    +   G+++  ++Y S+F AC     IN G   H   +K+     L  
Sbjct: 375  NGQFEECLEIFQTLIGKGVTLNPYIYTSIFQACSAVADINFGAQVHADAIKRGFVAFLYG 434

Query: 914  SIADCLLKMYVRCLGFDDAYRVFHKMSNKMLSSWNIMISGFVHNGHLQEALDLFLRMKDE 1093
              A  ++ MY +C   D AY+ F  +      +W  +I G+ ++G+  EAL LF RM++ 
Sbjct: 435  --ASAMITMYSKCGRLDYAYQAFESIDKPDTVAWTAIICGYAYHGNASEALRLFSRMQNS 492

Query: 1094 G 1096
            G
Sbjct: 493  G 493



 Score = 60.8 bits (146), Expect = 9e-07
 Identities = 33/127 (25%), Positives = 58/127 (45%)
 Frame = +2

Query: 716  LLSLANHGRFNEAREFLDLMDSSGISIKRHVYQSLFTACGISKSINDGRFFHNHMMKKIG 895
            ++     G+  E  E    M    + +   V+  +  AC   + +N GR  H + +K   
Sbjct: 268  MVGYTEDGKLGEVLESFAEMVRESVEVDDFVFSIVLKACAGLEELNAGRQIHGYSVKL-- 325

Query: 896  SKDLNTSIADCLLKMYVRCLGFDDAYRVFHKMSNKMLSSWNIMISGFVHNGHLQEALDLF 1075
              D   S+   L+  YV+C  F+ A R F ++      SW+ +ISG+  NG  +E L++F
Sbjct: 326  GLDSEVSVGTPLVDFYVKCGEFESARRAFKRIDEPNDVSWSAIISGYCQNGQFEECLEIF 385

Query: 1076 LRMKDEG 1096
              +  +G
Sbjct: 386  QTLIGKG 392


>ref|XP_006844488.1| hypothetical protein AMTR_s00016p00115350 [Amborella trichopoda]
            gi|548846959|gb|ERN06163.1| hypothetical protein
            AMTR_s00016p00115350 [Amborella trichopoda]
          Length = 396

 Score = 96.7 bits (239), Expect = 1e-17
 Identities = 52/130 (40%), Positives = 77/130 (59%)
 Frame = +2

Query: 695  GRLESVHLLSLANHGRFNEAREFLDLMDSSGISIKRHVYQSLFTACGISKSINDGRFFHN 874
            G +E+VHL+SL+  G+F EA+ FL  M+SS I +    Y +LF ACG   S++ G+ FH 
Sbjct: 58   GNVENVHLISLSKQGKFQEAQAFLHSMESSNIPVMPQTYVTLFEACGDMGSLSFGKIFHE 117

Query: 875  HMMKKIGSKDLNTSIADCLLKMYVRCLGFDDAYRVFHKMSNKMLSSWNIMISGFVHNGHL 1054
             M  K   K+    + + LL MY +     DA++VF++M +K   +W+IM+S F  NG +
Sbjct: 118  RM--KRVEKEPEIFLGNHLLSMYSKLGSIVDAFQVFNEMPSKNSVTWSIMVSAFSQNGFV 175

Query: 1055 QEALDLFLRM 1084
             EAL L   M
Sbjct: 176  SEALSLLSDM 185



 Score = 57.8 bits (138), Expect = 8e-06
 Identities = 38/127 (29%), Positives = 62/127 (48%), Gaps = 1/127 (0%)
 Frame = +2

Query: 707  SVHLLSLANHGRFNEAREFLDLMDSSGISIKRHVYQSLFTACGIS-KSINDGRFFHNHMM 883
            S+ + + + +G  +EA   L  M+  GIS  + VY SL  AC  S +    G+  H+ ++
Sbjct: 163  SIMVSAFSQNGFVSEALSLLSDMNVIGISSNQSVYVSLLRACSNSPRGPEPGKQLHSQII 222

Query: 884  KKIGSKDLNTSIADCLLKMYVRCLGFDDAYRVFHKMSNKMLSSWNIMISGFVHNGHLQEA 1063
            K     DL    A C   MY++C   D A  +F  M  K   +W  ++SG+   G  + A
Sbjct: 223  KLGFIPDLLIETALC--NMYIKCRELDSAKLIFDNMPEKNAVTWTAVMSGYTQAGKEEAA 280

Query: 1064 LDLFLRM 1084
            L L+ ++
Sbjct: 281  LALYQKI 287


>ref|XP_006290013.1| hypothetical protein CARUB_v10003644mg [Capsella rubella]
            gi|482558719|gb|EOA22911.1| hypothetical protein
            CARUB_v10003644mg [Capsella rubella]
          Length = 752

 Score = 94.7 bits (234), Expect = 6e-17
 Identities = 47/138 (34%), Positives = 82/138 (59%)
 Frame = +2

Query: 683  QHQNGRLESVHLLSLANHGRFNEAREFLDLMDSSGISIKRHVYQSLFTACGISKSINDGR 862
            +H+ G++E++HL+SL+ HG+ NEA  F   MD +G+S+  + YQ LF AC   +S++ GR
Sbjct: 44   EHKQGQVENLHLVSLSKHGKLNEAFAFFQEMDKAGVSVSPYSYQCLFEACRNLRSLSHGR 103

Query: 863  FFHNHMMKKIGSKDLNTSIADCLLKMYVRCLGFDDAYRVFHKMSNKMLSSWNIMISGFVH 1042
              H+ M  ++  ++ +  + +C+L+MY  C   +DA ++F +M +    S   M+S +  
Sbjct: 104  LLHDRM--RMAFENPSLLLQNCVLQMYCECGSLEDADKLFDEMPDLNAVSRVTMVSAYAE 161

Query: 1043 NGHLQEALDLFLRMKDEG 1096
             G L +A+ LF  M   G
Sbjct: 162  RGLLDKAVGLFSGMLASG 179



 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 3/118 (2%)
 Frame = +2

Query: 740  RFNEA-REFLDLMDSSGISIKRHVYQSLFTACGISKSINDGRFFHNHMMKK--IGSKDLN 910
            +F EA + F  L   +   +    Y S+F AC +    N G   H   +K+  IGS+   
Sbjct: 366  QFEEAVKTFKSLRSKNAAVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGE 425

Query: 911  TSIADCLLKMYVRCLGFDDAYRVFHKMSNKMLSSWNIMISGFVHNGHLQEALDLFLRM 1084
            ++    L+ MY +C   DDA+ VF  M N  + +W   +SG  + G+  EAL LF +M
Sbjct: 426  SA----LITMYSKCGCLDDAHEVFESMDNPDIVAWTAFLSGHAYYGNASEALRLFEKM 479


>ref|XP_004969881.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32450,
            mitochondrial-like [Setaria italica]
          Length = 776

 Score = 89.0 bits (219), Expect = 3e-15
 Identities = 45/127 (35%), Positives = 71/127 (55%)
 Frame = +2

Query: 716  LLSLANHGRFNEAREFLDLMDSSGISIKRHVYQSLFTACGISKSINDGRFFHNHMMKKIG 895
            L  L   G   EA E   ++  +G  +  H Y  L  AC  + ++ + R  H+ M++   
Sbjct: 388  LEKLCEDGNIKEALEVQAMLQGNGTVLHAHQYFRLMQACVDATALEEARVIHSQMLES-- 445

Query: 896  SKDLNTSIADCLLKMYVRCLGFDDAYRVFHKMSNKMLSSWNIMISGFVHNGHLQEALDLF 1075
            S  ++T + + +L+MY +C   +DA ++F  M ++ L+SWN MISGFVHNGH +EA D F
Sbjct: 446  SIVVDTDVQNKILEMYAKCGSMEDAKKLFSTMDHRSLASWNTMISGFVHNGHGEEATDFF 505

Query: 1076 LRMKDEG 1096
             + K  G
Sbjct: 506  DQFKQTG 512


>ref|XP_006483319.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32450,
            mitochondrial-like [Citrus sinensis]
          Length = 773

 Score = 87.8 bits (216), Expect = 7e-15
 Identities = 47/135 (34%), Positives = 74/135 (54%)
 Frame = +2

Query: 692  NGRLESVHLLSLANHGRFNEAREFLDLMDSSGISIKRHVYQSLFTACGISKSINDGRFFH 871
            NG LE +    L   G+  EA E L L++   IS+    +  L  ACG +K++ + +  H
Sbjct: 376  NGTLEQLD--GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVH 433

Query: 872  NHMMKKIGSKDLNTSIADCLLKMYVRCLGFDDAYRVFHKMSNKMLSSWNIMISGFVHNGH 1051
             H+ + +    L  S  + +LKMY  C   DDA+ VF  M+ + L+SW+ MI+GF  NG 
Sbjct: 434  EHVERLLSP--LRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGL 491

Query: 1052 LQEALDLFLRMKDEG 1096
             ++A+D+F + K  G
Sbjct: 492  GEDAVDIFSQFKQAG 506


>ref|XP_006450490.1| hypothetical protein CICLE_v10007521mg [Citrus clementina]
            gi|557553716|gb|ESR63730.1| hypothetical protein
            CICLE_v10007521mg [Citrus clementina]
          Length = 773

 Score = 87.8 bits (216), Expect = 7e-15
 Identities = 47/135 (34%), Positives = 74/135 (54%)
 Frame = +2

Query: 692  NGRLESVHLLSLANHGRFNEAREFLDLMDSSGISIKRHVYQSLFTACGISKSINDGRFFH 871
            NG LE +    L   G+  EA E L L++   IS+    +  L  ACG +K++ + +  H
Sbjct: 376  NGTLEQLD--GLVKEGKVKEAIEVLGLLEKQCISVDLPTFSQLMQACGDAKALEEAKAVH 433

Query: 872  NHMMKKIGSKDLNTSIADCLLKMYVRCLGFDDAYRVFHKMSNKMLSSWNIMISGFVHNGH 1051
             H+ + +    L  S  + +LKMY  C   DDA+ VF  M+ + L+SW+ MI+GF  NG 
Sbjct: 434  EHVERLLSP--LRVSTYNGILKMYSECDSMDDAFSVFSNMTERDLTSWDTMITGFAKNGL 491

Query: 1052 LQEALDLFLRMKDEG 1096
             ++A+D+F + K  G
Sbjct: 492  GEDAVDIFSQFKQAG 506


>gb|EPS68237.1| hypothetical protein M569_06531 [Genlisea aurea]
          Length = 1003

 Score = 87.8 bits (216), Expect = 7e-15
 Identities = 46/136 (33%), Positives = 75/136 (55%)
 Frame = +2

Query: 683  QHQNGRLESVHLLSLANHGRFNEAREFLDLMDSSGISIKRHVYQSLFTACGISKSINDGR 862
            +H  G LE+VHL+SL+ HG+  EA EF+  MD S + +    Y+ L  AC   KS++ G+
Sbjct: 45   RHHQGELENVHLVSLSKHGKLEEAHEFVLEMDRSNVPVSPQSYKHLLEACSRLKSLHFGK 104

Query: 863  FFHNHMMKKIGSKDLNTSIADCLLKMYVRCLGFDDAYRVFHKMSNKMLSSWNIMISGFVH 1042
              H  +     +      + + +++MY  C    DA +VF +M  + L S   +IS +  
Sbjct: 105  LIHRRL-----NDPPPRFLVNYVVQMYCDCGSLSDARKVFDEMRERALGSGITLISAYAD 159

Query: 1043 NGHLQEALDLFLRMKD 1090
             G  +EAL++FL++KD
Sbjct: 160  KGLTKEALEIFLQVKD 175


>ref|XP_006368854.1| hypothetical protein POPTR_0001s13120g [Populus trichocarpa]
            gi|550347141|gb|ERP65423.1| hypothetical protein
            POPTR_0001s13120g [Populus trichocarpa]
          Length = 655

 Score = 87.4 bits (215), Expect = 9e-15
 Identities = 45/115 (39%), Positives = 65/115 (56%)
 Frame = +2

Query: 740  RFNEAREFLDLMDSSGISIKRHVYQSLFTACGISKSINDGRFFHNHMMKKIGSKDLNTSI 919
            +  EAREFL  M+ +GIS+    Y+ LF ACG  KS+ DGR FH  M + +  K+    +
Sbjct: 64   KLKEAREFLKQMEDAGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTV--KNPPEFL 121

Query: 920  ADCLLKMYVRCLGFDDAYRVFHKMSNKMLSSWNIMISGFVHNGHLQEALDLFLRM 1084
             + +LKMY +C    DA +VF +M  + L SWN +IS +  NG   +   +F  M
Sbjct: 122  ENSVLKMYCKCGSLADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNM 176



 Score = 67.4 bits (163), Expect = 1e-08
 Identities = 34/108 (31%), Positives = 58/108 (53%)
 Frame = +2

Query: 773  MDSSGISIKRHVYQSLFTACGISKSINDGRFFHNHMMKKIGSKDLNTSIADCLLKMYVRC 952
            M + G+ +  +V+  +  AC   + +N GR  H H++K      L + ++  ++ MY RC
Sbjct: 277  MVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKL----GLESEVSSAMITMYSRC 332

Query: 953  LGFDDAYRVFHKMSNKMLSSWNIMISGFVHNGHLQEALDLFLRMKDEG 1096
               D A RVF  + +    +W  +I+G+ + G+  EAL LF RM+D G
Sbjct: 333  GRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCG 380


>gb|EMJ26812.1| hypothetical protein PRUPE_ppa003215mg [Prunus persica]
          Length = 592

 Score = 85.9 bits (211), Expect = 3e-14
 Identities = 43/135 (31%), Positives = 75/135 (55%)
 Frame = +2

Query: 692  NGRLESVHLLSLANHGRFNEAREFLDLMDSSGISIKRHVYQSLFTACGISKSINDGRFFH 871
            +G LE +        G+  EA E L +++   + +  H+Y  L  ACG +K++ + +F H
Sbjct: 195  SGTLEELD--KFCKEGKVKEAVEILGMLEKQQVQVDLHLYFQLMQACGEAKALEEAKFVH 252

Query: 872  NHMMKKIGSKDLNTSIADCLLKMYVRCLGFDDAYRVFHKMSNKMLSSWNIMISGFVHNGH 1051
             ++ + +    LN S  + +L+MY +C   D  + VF++M N+ L+SW+IMI+    NG 
Sbjct: 253  ENITRLLSP--LNVSTYNRILEMYSKCGSMDSTFMVFNQMPNRNLTSWDIMIAWLAKNGL 310

Query: 1052 LQEALDLFLRMKDEG 1096
             ++A+DLF   K  G
Sbjct: 311  GEDAIDLFTEFKKAG 325