BLASTX nr result
ID: Zingiber23_contig00047965
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00047965
(318 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containi... 81 2e-13
emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera] 81 2e-13
ref|XP_002322376.2| hypothetical protein POPTR_0015s15360g [Popu... 80 2e-13
gb|EOY27563.1| Pentatricopeptide repeat superfamily protein [The... 79 8e-13
gb|EOY27561.1| Pentatricopeptide repeat (PPR-like) superfamily p... 79 8e-13
ref|XP_002528370.1| pentatricopeptide repeat-containing protein,... 78 1e-12
ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group] g... 78 1e-12
gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japo... 78 1e-12
ref|XP_004293756.1| PREDICTED: pentatricopeptide repeat-containi... 77 2e-12
ref|XP_006448708.1| hypothetical protein CICLE_v10014445mg [Citr... 75 9e-12
ref|XP_006663591.1| PREDICTED: pentatricopeptide repeat-containi... 74 2e-11
gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays] 74 2e-11
ref|XP_006362578.1| PREDICTED: pentatricopeptide repeat-containi... 74 3e-11
ref|XP_004233900.1| PREDICTED: pentatricopeptide repeat-containi... 73 4e-11
ref|XP_006468480.1| PREDICTED: pentatricopeptide repeat-containi... 72 6e-11
gb|ESW11628.1| hypothetical protein PHAVU_008G046300g [Phaseolus... 72 6e-11
ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containi... 72 8e-11
ref|XP_004979666.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 71 1e-10
ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [S... 71 1e-10
ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223... 69 5e-10
>ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Vitis vinifera]
Length = 708
Score = 80.9 bits (198), Expect = 2e-13
Identities = 37/69 (53%), Positives = 50/69 (72%)
Frame = -3
Query: 316 KKQRTRTTNILVRKLSSEGQVDAAGLFINKLLDEDQNADRITCIAFLNACYETGRYSSAS 137
K+Q RT N LVRKL SEG++D A LF +KLLD++ N +R+T + F+N CYE+ +Y S
Sbjct: 638 KRQWIRTVNTLVRKLCSEGKLDMAALFFHKLLDKEPNVNRVTLLGFMNKCYESNKYGLVS 697
Query: 136 EFSERISKG 110
E SERI +G
Sbjct: 698 ELSERICEG 706
>emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
Length = 708
Score = 80.9 bits (198), Expect = 2e-13
Identities = 37/69 (53%), Positives = 50/69 (72%)
Frame = -3
Query: 316 KKQRTRTTNILVRKLSSEGQVDAAGLFINKLLDEDQNADRITCIAFLNACYETGRYSSAS 137
K+Q RT N LVRKL SEG++D A LF +KLLD++ N +R+T + F+N CYE+ +Y S
Sbjct: 638 KRQWIRTVNTLVRKLCSEGKLDMAALFFHKLLDKEPNVNRVTLLGFMNKCYESNKYGLVS 697
Query: 136 EFSERISKG 110
E SERI +G
Sbjct: 698 ELSERICEG 706
>ref|XP_002322376.2| hypothetical protein POPTR_0015s15360g [Populus trichocarpa]
gi|550322786|gb|EEF06503.2| hypothetical protein
POPTR_0015s15360g [Populus trichocarpa]
Length = 594
Score = 80.5 bits (197), Expect = 2e-13
Identities = 40/69 (57%), Positives = 49/69 (71%)
Frame = -3
Query: 316 KKQRTRTTNILVRKLSSEGQVDAAGLFINKLLDEDQNADRITCIAFLNACYETGRYSSAS 137
KK RT N L+RKL SE +V A LF +KLLD+DQN DR+T AF ACYE+ +Y+ S
Sbjct: 524 KKLWIRTVNTLIRKLCSERKVGMAVLFFHKLLDKDQNVDRVTLTAFTTACYESNKYALVS 583
Query: 136 EFSERISKG 110
+ SERISKG
Sbjct: 584 DLSERISKG 592
>gb|EOY27563.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
Length = 738
Score = 78.6 bits (192), Expect = 8e-13
Identities = 37/69 (53%), Positives = 50/69 (72%)
Frame = -3
Query: 316 KKQRTRTTNILVRKLSSEGQVDAAGLFINKLLDEDQNADRITCIAFLNACYETGRYSSAS 137
KK RT N L+RKL SE +V A LF ++LLD+D+N DR+T AF+ ACYET +++ S
Sbjct: 668 KKLWMRTVNTLIRKLCSEKKVGIAALFFHRLLDKDRNVDRVTLAAFMTACYETDKFALVS 727
Query: 136 EFSERISKG 110
+ +ERISKG
Sbjct: 728 DLNERISKG 736
>gb|EOY27561.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
cacao]
Length = 692
Score = 78.6 bits (192), Expect = 8e-13
Identities = 37/69 (53%), Positives = 50/69 (72%)
Frame = -3
Query: 316 KKQRTRTTNILVRKLSSEGQVDAAGLFINKLLDEDQNADRITCIAFLNACYETGRYSSAS 137
KK RT N L+RKL SE +V A LF ++LLD+D+N DR+T AF+ ACYET +++ S
Sbjct: 622 KKLWMRTVNTLIRKLCSEKKVGIAALFFHRLLDKDRNVDRVTLAAFMTACYETDKFALVS 681
Query: 136 EFSERISKG 110
+ +ERISKG
Sbjct: 682 DLNERISKG 690
>ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223532238|gb|EEF34042.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 712
Score = 78.2 bits (191), Expect = 1e-12
Identities = 39/69 (56%), Positives = 48/69 (69%)
Frame = -3
Query: 316 KKQRTRTTNILVRKLSSEGQVDAAGLFINKLLDEDQNADRITCIAFLNACYETGRYSSAS 137
KK RT N L+RKL SE +V A LF +KLLD+D N DRIT AF ACYE+ +++ S
Sbjct: 642 KKLWIRTVNTLIRKLCSEKKVGVAALFFHKLLDKDLNVDRITLAAFTTACYESNKFALVS 701
Query: 136 EFSERISKG 110
+ SERISKG
Sbjct: 702 DLSERISKG 710
>ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
gi|77551887|gb|ABA94684.1| pentatricopeptide, putative,
expressed [Oryza sativa Japonica Group]
gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa
Japonica Group]
Length = 671
Score = 77.8 bits (190), Expect = 1e-12
Identities = 36/68 (52%), Positives = 48/68 (70%)
Frame = -3
Query: 316 KKQRTRTTNILVRKLSSEGQVDAAGLFINKLLDEDQNADRITCIAFLNACYETGRYSSAS 137
K+Q+ T +++VRKLS+ G VDAA LF+ K+LDED D T F+N+CYE RY+ AS
Sbjct: 595 KRQQVHTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFINSCYENNRYALAS 654
Query: 136 EFSERISK 113
E SE+ SK
Sbjct: 655 EMSEKFSK 662
>gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
Length = 563
Score = 77.8 bits (190), Expect = 1e-12
Identities = 36/68 (52%), Positives = 48/68 (70%)
Frame = -3
Query: 316 KKQRTRTTNILVRKLSSEGQVDAAGLFINKLLDEDQNADRITCIAFLNACYETGRYSSAS 137
K+Q+ T +++VRKLS+ G VDAA LF+ K+LDED D T F+N+CYE RY+ AS
Sbjct: 487 KRQQVHTVDVVVRKLSALGDVDAASLFLKKVLDEDYAVDHATYTGFINSCYENNRYALAS 546
Query: 136 EFSERISK 113
E SE+ SK
Sbjct: 547 EMSEKFSK 554
>ref|XP_004293756.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Fragaria vesca subsp. vesca]
Length = 705
Score = 77.0 bits (188), Expect = 2e-12
Identities = 38/69 (55%), Positives = 48/69 (69%)
Frame = -3
Query: 316 KKQRTRTTNILVRKLSSEGQVDAAGLFINKLLDEDQNADRITCIAFLNACYETGRYSSAS 137
KK RT N LVRKL E +V A LF +KL+D+DQN DR+T AF ACYE+ +Y+ S
Sbjct: 635 KKYWIRTVNTLVRKLCCEKKVGIAALFFHKLVDKDQNVDRVTLQAFTTACYESNKYALLS 694
Query: 136 EFSERISKG 110
+ +ERISKG
Sbjct: 695 DLTERISKG 703
>ref|XP_006448708.1| hypothetical protein CICLE_v10014445mg [Citrus clementina]
gi|557551319|gb|ESR61948.1| hypothetical protein
CICLE_v10014445mg [Citrus clementina]
Length = 707
Score = 75.1 bits (183), Expect = 9e-12
Identities = 36/69 (52%), Positives = 49/69 (71%)
Frame = -3
Query: 316 KKQRTRTTNILVRKLSSEGQVDAAGLFINKLLDEDQNADRITCIAFLNACYETGRYSSAS 137
KK RT N L+RKL SE +V A LF +KLLD+DQN DR++ A NACYE+ +Y+ S
Sbjct: 637 KKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLDKDQNVDRVSLAALKNACYESNKYALFS 696
Query: 136 EFSERISKG 110
+ S+RI++G
Sbjct: 697 DLSQRIAEG 705
>ref|XP_006663591.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Oryza brachyantha]
Length = 664
Score = 74.3 bits (181), Expect = 2e-11
Identities = 36/81 (44%), Positives = 52/81 (64%)
Frame = -3
Query: 316 KKQRTRTTNILVRKLSSEGQVDAAGLFINKLLDEDQNADRITCIAFLNACYETGRYSSAS 137
K+Q+ T ++LVRKLS+ G VDAA LF+ ++L+ D D T F+N+CYE RY+ S
Sbjct: 581 KRQQAHTVDVLVRKLSALGNVDAASLFLKEVLERDCAVDHATYTGFINSCYENNRYALTS 640
Query: 136 EFSERISKGRINFVKDISVIT 74
E SE+ SK + F K ++ T
Sbjct: 641 EMSEKFSKKSLAFKKRDNLAT 661
>gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
Length = 676
Score = 74.3 bits (181), Expect = 2e-11
Identities = 39/81 (48%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
Frame = -3
Query: 316 KKQRTRTTNILVRKLSSEGQVDAAGLFINKLLDEDQNADRITCIAFLNACYETGRYSSAS 137
K+Q+ T + LVRKLS+ G +DAA LF+ +LD+ D T +F+N+CYE+ RY+ AS
Sbjct: 595 KRQQAHTADALVRKLSTVGNLDAASLFLKNVLDKHYAVDHATYTSFINSCYESNRYALAS 654
Query: 136 EFSERISKGRINF-VKDISVI 77
E SE+ISK F KD +VI
Sbjct: 655 EISEKISKRISGFKKKDTAVI 675
>ref|XP_006362578.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like isoform X1 [Solanum tuberosum]
gi|565393841|ref|XP_006362579.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g19890-like isoform X2 [Solanum tuberosum]
gi|565393843|ref|XP_006362580.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g19890-like isoform X3 [Solanum tuberosum]
Length = 716
Score = 73.6 bits (179), Expect = 3e-11
Identities = 36/68 (52%), Positives = 46/68 (67%)
Frame = -3
Query: 316 KKQRTRTTNILVRKLSSEGQVDAAGLFINKLLDEDQNADRITCIAFLNACYETGRYSSAS 137
KK RT + LVRKL SE VD A LF +KLLD+ Q+ DR+T AF++ACYE+ Y S
Sbjct: 641 KKLWIRTVSTLVRKLCSEKNVDVAALFFHKLLDKQQSVDRVTLAAFMSACYESNNYDLVS 700
Query: 136 EFSERISK 113
+ERI+K
Sbjct: 701 SMNERITK 708
>ref|XP_004233900.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Solanum lycopersicum]
Length = 716
Score = 72.8 bits (177), Expect = 4e-11
Identities = 35/68 (51%), Positives = 47/68 (69%)
Frame = -3
Query: 316 KKQRTRTTNILVRKLSSEGQVDAAGLFINKLLDEDQNADRITCIAFLNACYETGRYSSAS 137
KK RT + LVRKL SE V+ A LF +KLLD+ Q+ DR+T AF++ACYE+ +Y S
Sbjct: 641 KKLWVRTVSTLVRKLCSEKNVNVAALFFHKLLDKQQSVDRVTLAAFMSACYESNKYDLVS 700
Query: 136 EFSERISK 113
+ERI+K
Sbjct: 701 SMNERITK 708
>ref|XP_006468480.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like [Citrus sinensis]
Length = 707
Score = 72.4 bits (176), Expect = 6e-11
Identities = 35/69 (50%), Positives = 48/69 (69%)
Frame = -3
Query: 316 KKQRTRTTNILVRKLSSEGQVDAAGLFINKLLDEDQNADRITCIAFLNACYETGRYSSAS 137
KK RT N L+RKL SE +V A LF +KLL +DQN DR++ A NACYE+ +Y+ S
Sbjct: 637 KKLWIRTVNTLIRKLCSEKRVGMAALFFHKLLGKDQNVDRVSLAALKNACYESNKYALFS 696
Query: 136 EFSERISKG 110
+ S+RI++G
Sbjct: 697 DLSQRIAEG 705
>gb|ESW11628.1| hypothetical protein PHAVU_008G046300g [Phaseolus vulgaris]
gi|561012768|gb|ESW11629.1| hypothetical protein
PHAVU_008G046300g [Phaseolus vulgaris]
Length = 698
Score = 72.4 bits (176), Expect = 6e-11
Identities = 37/68 (54%), Positives = 44/68 (64%)
Frame = -3
Query: 316 KKQRTRTTNILVRKLSSEGQVDAAGLFINKLLDEDQNADRITCIAFLNACYETGRYSSAS 137
KK RT N LVRKLSSE +V A LF KLLD D + DR+T AF+ ACYE+ Y+ S
Sbjct: 622 KKPWIRTVNTLVRKLSSEKKVGMAALFFRKLLDMDPHVDRVTLAAFMTACYESSNYALVS 681
Query: 136 EFSERISK 113
+ S RI K
Sbjct: 682 DLSSRIYK 689
>ref|XP_003533559.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g19890-like isoform X1 [Glycine max]
gi|571479155|ref|XP_006587776.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g19890-like isoform X2 [Glycine max]
gi|571479157|ref|XP_006587777.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g19890-like isoform X3 [Glycine max]
Length = 693
Score = 72.0 bits (175), Expect = 8e-11
Identities = 36/68 (52%), Positives = 45/68 (66%)
Frame = -3
Query: 316 KKQRTRTTNILVRKLSSEGQVDAAGLFINKLLDEDQNADRITCIAFLNACYETGRYSSAS 137
KK RT N LVRKL SE +V A LF +KLLD+D N +R+T AF+ ACYE+ +Y S
Sbjct: 616 KKLWVRTVNTLVRKLCSERKVGMAALFFHKLLDKDPNVNRVTIAAFMTACYESNKYDLVS 675
Query: 136 EFSERISK 113
+ S RI K
Sbjct: 676 DLSARIYK 683
>ref|XP_004979666.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g19890-like [Setaria italica]
Length = 679
Score = 71.2 bits (173), Expect = 1e-10
Identities = 36/81 (44%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Frame = -3
Query: 316 KKQRTRTTNILVRKLSSEGQVDAAGLFINKLLDEDQNADRITCIAFLNACYETGRYSSAS 137
K+Q+ T + LVRKLS+ +DAA LF+ +L++ D +T +F+N+CY + RY+ AS
Sbjct: 598 KRQQAHTADALVRKLSAADNLDAASLFLKNVLEKHYTVDHLTYTSFINSCYNSNRYALAS 657
Query: 136 EFSERISKGRINF-VKDISVI 77
E SE+ISK NF KD + I
Sbjct: 658 EISEKISKRISNFHQKDATTI 678
>ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
gi|241935673|gb|EES08818.1| hypothetical protein
SORBIDRAFT_05g024080 [Sorghum bicolor]
Length = 676
Score = 71.2 bits (173), Expect = 1e-10
Identities = 37/81 (45%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Frame = -3
Query: 316 KKQRTRTTNILVRKLSSEGQVDAAGLFINKLLDEDQNADRITCIAFLNACYETGRYSSAS 137
K+Q+ + LVRKLS+ +DAA LF+ +LD+ D T +F+N+CYE+ RY+ AS
Sbjct: 595 KRQQAHAADALVRKLSAVDNLDAASLFLKNVLDKHYAVDHATYTSFINSCYESNRYALAS 654
Query: 136 EFSERISKGRINF-VKDISVI 77
E SE+ISK F KD++VI
Sbjct: 655 EISEKISKRISGFKKKDVAVI 675
>ref|XP_004157755.1| PREDICTED: uncharacterized protein LOC101223774 [Cucumis sativus]
Length = 1315
Score = 69.3 bits (168), Expect = 5e-10
Identities = 35/69 (50%), Positives = 46/69 (66%)
Frame = -3
Query: 316 KKQRTRTTNILVRKLSSEGQVDAAGLFINKLLDEDQNADRITCIAFLNACYETGRYSSAS 137
KK RT + L+RKL E +V A LF +KLLD++ N DR+T AF AC E+ +Y+ S
Sbjct: 1245 KKLWIRTVHTLIRKLCCEKKVALAALFFHKLLDKEVNVDRVTLAAFNTACIESNKYALVS 1304
Query: 136 EFSERISKG 110
+ SERISKG
Sbjct: 1305 DLSERISKG 1313