BLASTX nr result
ID: Zingiber23_contig00047936
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00047936
(692 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABF70162.1| RNA-binding protein, putative [Musa acuminata] 99 2e-18
ref|XP_002274589.1| PREDICTED: uncharacterized protein LOC100267... 92 2e-16
emb|CAN75218.1| hypothetical protein VITISV_003519 [Vitis vinifera] 92 2e-16
ref|XP_006836782.1| hypothetical protein AMTR_s00088p00174110 [A... 87 5e-15
gb|EOY12155.1| RNA-binding family protein isoform 6 [Theobroma c... 85 2e-14
gb|EOY12151.1| RNA-binding family protein isoform 2 [Theobroma c... 85 2e-14
gb|EOY12150.1| RNA-binding family protein isoform 1 [Theobroma c... 85 2e-14
ref|XP_004248329.1| PREDICTED: uncharacterized protein LOC101261... 85 2e-14
ref|XP_004248330.1| PREDICTED: uncharacterized protein LOC101261... 84 3e-14
ref|XP_006352533.1| PREDICTED: heterogeneous nuclear ribonucleop... 82 2e-13
ref|XP_002300356.2| hypothetical protein POPTR_0001s37230g [Popu... 80 5e-13
ref|XP_006474951.1| PREDICTED: heterogeneous nuclear ribonucleop... 79 1e-12
ref|XP_006452507.1| hypothetical protein CICLE_v10008158mg [Citr... 79 1e-12
ref|XP_002529044.1| Heterogeneous nuclear ribonucleoprotein 27C,... 77 4e-12
gb|EOY28917.1| RNA-binding family protein isoform 5 [Theobroma c... 76 1e-11
gb|EOY28916.1| RNA-binding family protein isoform 4 [Theobroma c... 76 1e-11
gb|EOY28915.1| RNA-binding family protein isoform 3 [Theobroma c... 76 1e-11
gb|EOY28913.1| RNA-binding family protein isoform 1 [Theobroma c... 76 1e-11
ref|XP_002316761.1| hypothetical protein POPTR_0011s09050g [Popu... 76 1e-11
ref|XP_006344882.1| PREDICTED: heterogeneous nuclear ribonucleop... 74 4e-11
>gb|ABF70162.1| RNA-binding protein, putative [Musa acuminata]
Length = 465
Score = 98.6 bits (244), Expect = 2e-18
Identities = 56/152 (36%), Positives = 75/152 (49%)
Frame = +3
Query: 6 LNYTVNSTTASASMASGRENLGSFSNSRLNWASSLPISSQIEGSFSGFWGGNVSCVGTDN 185
L++ S ++ASM S +LGS LN GS S + GN+ G
Sbjct: 324 LDHATKSAISNASMVSRSGSLGSLGTGNLN-----------RGSGSSYTSGNLGFGGGGY 372
Query: 186 TVLGGSNFERSVSPPAANTNRTTSCFKYEASYENLYRDDSVFGDPTWQLSFLDLDVTSSL 365
LG ++F+R ++P + NTN S YE SY LY SV+GDPTW S + D T S
Sbjct: 373 IGLGRNSFDRRIAPASPNTNLIASSSGYEGSYAKLYGATSVYGDPTWGSSSSEFDATGSF 432
Query: 366 SYKLGNPDLDITGKEIEDFACGYYAKNKQTYA 461
SYKL N + D+TG D+ GY N + A
Sbjct: 433 SYKLNNSNSDVTGNGFADYMAGYNVNNNRGIA 464
>ref|XP_002274589.1| PREDICTED: uncharacterized protein LOC100267443 [Vitis vinifera]
Length = 478
Score = 92.0 bits (227), Expect = 2e-16
Identities = 60/153 (39%), Positives = 79/153 (51%), Gaps = 3/153 (1%)
Frame = +3
Query: 6 LNYTVNSTTASASMASGRENLG-SFSNSRLNWASSLPISSQIEGSFSGFWGGNVSCVGTD 182
LN N + A + SG N G SF N NW SS PI +Q GS GF G+++ D
Sbjct: 321 LNNATNPASPGAYLGSGGGNFGVSFGNGGANWGSS-PIPAQGGGSALGFTSGSLNYGSGD 379
Query: 183 NTV-LGGSNFERSVSPP-AANTNRTTSCFKYEASYENLYRDDSVFGDPTWQLSFLDLDVT 356
++ LGG + R+ S AA ++ S YE SYE LYR SV+ D TW+ +LD
Sbjct: 380 SSYGLGGGGYGRNSSTGVAAASSFAPSTGGYEGSYEELYRSGSVYNDSTWRTPTSELDGP 439
Query: 357 SSLSYKLGNPDLDITGKEIEDFACGYYAKNKQT 455
S SY LGN D+T ED+ Y N+Q+
Sbjct: 440 GSFSYGLGNAASDVTANSAEDYIGSYSVANRQS 472
>emb|CAN75218.1| hypothetical protein VITISV_003519 [Vitis vinifera]
Length = 482
Score = 92.0 bits (227), Expect = 2e-16
Identities = 60/153 (39%), Positives = 79/153 (51%), Gaps = 3/153 (1%)
Frame = +3
Query: 6 LNYTVNSTTASASMASGRENLG-SFSNSRLNWASSLPISSQIEGSFSGFWGGNVSCVGTD 182
LN N + A + SG N G SF N NW SS PI +Q GS GF G+++ D
Sbjct: 321 LNNATNPASPGAYLGSGGGNFGVSFGNGGANWGSS-PIPAQGGGSALGFTSGSLNYGSGD 379
Query: 183 NTV-LGGSNFERSVSPP-AANTNRTTSCFKYEASYENLYRDDSVFGDPTWQLSFLDLDVT 356
++ LGG + R+ S AA ++ S YE SYE LYR SV+ D TW+ +LD
Sbjct: 380 SSYGLGGGGYGRNSSTGVAAASSFAPSTGGYEGSYEELYRSGSVYNDSTWRTPTSELDGP 439
Query: 357 SSLSYKLGNPDLDITGKEIEDFACGYYAKNKQT 455
S SY LGN D+T ED+ Y N+Q+
Sbjct: 440 GSFSYGLGNAASDVTANSAEDYIGSYSVANRQS 472
>ref|XP_006836782.1| hypothetical protein AMTR_s00088p00174110 [Amborella trichopoda]
gi|548839342|gb|ERM99635.1| hypothetical protein
AMTR_s00088p00174110 [Amborella trichopoda]
Length = 472
Score = 87.0 bits (214), Expect = 5e-15
Identities = 55/153 (35%), Positives = 81/153 (52%), Gaps = 3/153 (1%)
Frame = +3
Query: 6 LNYTVNSTTASASMASGRENLGSFSNSRLNWASSLPISSQIEGSFSGFWGGNVSCVGTDN 185
LNY+ S T++ + SG ++G F N+ W SS ++SQ+ GS G+ GG G+
Sbjct: 315 LNYSA-SATSTGYIGSGSGSIGGFGNTGATWGSSPSMASQVGGSGGGYGGGGSFSYGSSE 373
Query: 186 TV--LGGSNFE-RSVSPPAANTNRTTSCFKYEASYENLYRDDSVFGDPTWQLSFLDLDVT 356
LG S+F R+ A ++ + S YE SY +LY SV+GDPTW+ +LD +
Sbjct: 374 NGYGLGMSSFGGRTSGTGLAPSSYSGSNGGYEGSYGDLYGGSSVYGDPTWRSGSTELDGS 433
Query: 357 SSLSYKLGNPDLDITGKEIEDFACGYYAKNKQT 455
SS SY LG D+ K + GY N+Q+
Sbjct: 434 SSFSYGLGTMASDVATKGSGSYMGGYSVSNRQS 466
>gb|EOY12155.1| RNA-binding family protein isoform 6 [Theobroma cacao]
Length = 481
Score = 84.7 bits (208), Expect = 2e-14
Identities = 51/151 (33%), Positives = 80/151 (52%), Gaps = 1/151 (0%)
Frame = +3
Query: 6 LNYTVNSTTASASMASGRENLGSFSNSRLNWASSLPISSQIEGSFSGFWGGNVSCVGTDN 185
L+ N+++ + SG + GS NS +NW+ P +Q G+ SG+ G DN
Sbjct: 328 LSNATNASSPGGYLGSGSGSFGSLGNSGVNWS---PSPAQSGGNASGYTGSAGYGNADDN 384
Query: 186 TVLGGSNFERSVSPPAANTNRTT-SCFKYEASYENLYRDDSVFGDPTWQLSFLDLDVTSS 362
LGG + R+ + AA T+ S +E SY ++YR SV+GD TW+ + DLD +S+
Sbjct: 385 YGLGGVGYGRNGATVAAPTSSFAGSTGSFEGSYGDIYRSGSVYGDSTWRSATPDLDGSST 444
Query: 363 LSYKLGNPDLDITGKEIEDFACGYYAKNKQT 455
SY LGN D+ + ED+ Y ++Q+
Sbjct: 445 FSYGLGNISSDVAVRTSEDYVGSYSVASRQS 475
>gb|EOY12151.1| RNA-binding family protein isoform 2 [Theobroma cacao]
gi|508720257|gb|EOY12154.1| RNA-binding family protein
isoform 2 [Theobroma cacao]
Length = 472
Score = 84.7 bits (208), Expect = 2e-14
Identities = 51/151 (33%), Positives = 80/151 (52%), Gaps = 1/151 (0%)
Frame = +3
Query: 6 LNYTVNSTTASASMASGRENLGSFSNSRLNWASSLPISSQIEGSFSGFWGGNVSCVGTDN 185
L+ N+++ + SG + GS NS +NW+ P +Q G+ SG+ G DN
Sbjct: 321 LSNATNASSPGGYLGSGSGSFGSLGNSGVNWS---PSPAQSGGNASGYTGSAGYGNADDN 377
Query: 186 TVLGGSNFERSVSPPAANTNRTT-SCFKYEASYENLYRDDSVFGDPTWQLSFLDLDVTSS 362
LGG + R+ + AA T+ S +E SY ++YR SV+GD TW+ + DLD +S+
Sbjct: 378 YGLGGVGYGRNGATVAAPTSSFAGSTGSFEGSYGDIYRSGSVYGDSTWRSATPDLDGSST 437
Query: 363 LSYKLGNPDLDITGKEIEDFACGYYAKNKQT 455
SY LGN D+ + ED+ Y ++Q+
Sbjct: 438 FSYGLGNISSDVAVRTSEDYVGSYSVASRQS 468
>gb|EOY12150.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508720255|gb|EOY12152.1| RNA-binding family protein
isoform 1 [Theobroma cacao] gi|508720256|gb|EOY12153.1|
RNA-binding family protein isoform 1 [Theobroma cacao]
Length = 474
Score = 84.7 bits (208), Expect = 2e-14
Identities = 51/151 (33%), Positives = 80/151 (52%), Gaps = 1/151 (0%)
Frame = +3
Query: 6 LNYTVNSTTASASMASGRENLGSFSNSRLNWASSLPISSQIEGSFSGFWGGNVSCVGTDN 185
L+ N+++ + SG + GS NS +NW+ P +Q G+ SG+ G DN
Sbjct: 321 LSNATNASSPGGYLGSGSGSFGSLGNSGVNWS---PSPAQSGGNASGYTGSAGYGNADDN 377
Query: 186 TVLGGSNFERSVSPPAANTNRTT-SCFKYEASYENLYRDDSVFGDPTWQLSFLDLDVTSS 362
LGG + R+ + AA T+ S +E SY ++YR SV+GD TW+ + DLD +S+
Sbjct: 378 YGLGGVGYGRNGATVAAPTSSFAGSTGSFEGSYGDIYRSGSVYGDSTWRSATPDLDGSST 437
Query: 363 LSYKLGNPDLDITGKEIEDFACGYYAKNKQT 455
SY LGN D+ + ED+ Y ++Q+
Sbjct: 438 FSYGLGNISSDVAVRTSEDYVGSYSVASRQS 468
>ref|XP_004248329.1| PREDICTED: uncharacterized protein LOC101261462 isoform 1 [Solanum
lycopersicum]
Length = 504
Score = 84.7 bits (208), Expect = 2e-14
Identities = 63/201 (31%), Positives = 94/201 (46%), Gaps = 4/201 (1%)
Frame = +3
Query: 6 LNYTVNSTTASASMASGRENLGSFSNSRLNWASSLPISSQIEGSFSGFWGGNVSCVGTDN 185
LN + +S + + SG N G F N+ NW S + + G+ SG+ GGN G +N
Sbjct: 323 LNASASSGGPGSFVGSGSGNYGVFGNNNANWGSLISVPG---GNSSGYGGGNFRS-GENN 378
Query: 186 TVLGGSNFERSVSPPAANTNRTTSCFKYEASYENLYRDDSVFGDPTWQLSFLDLDVTSSL 365
LG R+ + A ++ TTS YE SY + +R SV+GD TWQ D D + S
Sbjct: 379 YGLGSGGLGRNNA--ATTSSFTTSTGAYEGSYGDQFRGASVYGDRTWQGVSSDADGSGSF 436
Query: 366 SYKLGNPDLDITGKEIEDFACGYYAKNKQTYAES*KPCFLIFPDKYVLIKT*SRVRIHMY 545
Y GNP D++ KE ED+ Y N+Q P++ +I + + I+
Sbjct: 437 EYGFGNP-ADVSAKESEDYIGNYNIANRQ-------------PNRGNIILPIASLGIYCI 482
Query: 546 NDFP----FSFVPIYGIFCLQ 596
N F + P +GI C +
Sbjct: 483 NLFASFLNMTMKPYFGICCFE 503
>ref|XP_004248330.1| PREDICTED: uncharacterized protein LOC101261462 isoform 2 [Solanum
lycopersicum]
Length = 471
Score = 84.3 bits (207), Expect = 3e-14
Identities = 54/149 (36%), Positives = 76/149 (51%)
Frame = +3
Query: 6 LNYTVNSTTASASMASGRENLGSFSNSRLNWASSLPISSQIEGSFSGFWGGNVSCVGTDN 185
LN + +S + + SG N G F N+ NW S + + G+ SG+ GGN G +N
Sbjct: 323 LNASASSGGPGSFVGSGSGNYGVFGNNNANWGSLISVPG---GNSSGYGGGNFRS-GENN 378
Query: 186 TVLGGSNFERSVSPPAANTNRTTSCFKYEASYENLYRDDSVFGDPTWQLSFLDLDVTSSL 365
LG R+ + A ++ TTS YE SY + +R SV+GD TWQ D D + S
Sbjct: 379 YGLGSGGLGRNNA--ATTSSFTTSTGAYEGSYGDQFRGASVYGDRTWQGVSSDADGSGSF 436
Query: 366 SYKLGNPDLDITGKEIEDFACGYYAKNKQ 452
Y GNP D++ KE ED+ Y N+Q
Sbjct: 437 EYGFGNP-ADVSAKESEDYIGNYNIANRQ 464
>ref|XP_006352533.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Solanum
tuberosum]
Length = 471
Score = 81.6 bits (200), Expect = 2e-13
Identities = 52/149 (34%), Positives = 76/149 (51%)
Frame = +3
Query: 6 LNYTVNSTTASASMASGRENLGSFSNSRLNWASSLPISSQIEGSFSGFWGGNVSCVGTDN 185
LN + +S + + SG N G F N+ NW S + + G+ SG+ GGN G +N
Sbjct: 323 LNASASSGGPGSFVGSGSGNYGVFGNNNANWGSLISVPG---GNSSGYGGGNFRS-GENN 378
Query: 186 TVLGGSNFERSVSPPAANTNRTTSCFKYEASYENLYRDDSVFGDPTWQLSFLDLDVTSSL 365
LG R+ + A ++ T S YE SY + +R S++GD TWQ D D + S
Sbjct: 379 YGLGSGGLGRNNA--ATTSSFTASTGAYEGSYGDQFRGASMYGDRTWQGVSSDADGSGSF 436
Query: 366 SYKLGNPDLDITGKEIEDFACGYYAKNKQ 452
Y LGNP D++ K+ ED+ Y N+Q
Sbjct: 437 EYGLGNP-ADVSAKDSEDYIGNYSIANRQ 464
>ref|XP_002300356.2| hypothetical protein POPTR_0001s37230g [Populus trichocarpa]
gi|550349075|gb|EEE85161.2| hypothetical protein
POPTR_0001s37230g [Populus trichocarpa]
Length = 484
Score = 80.5 bits (197), Expect = 5e-13
Identities = 54/152 (35%), Positives = 77/152 (50%), Gaps = 3/152 (1%)
Frame = +3
Query: 9 NYTVNSTTASASMASGRENLG-SFSNSRLNWASSLPISSQIEGSFSGFWGGNVSCVGTDN 185
N N + + S N G SF NS NW +S P+S+Q GS SG+ G++ DN
Sbjct: 322 NTATNPASPGPLLGSRTGNFGVSFGNSGSNWGTS-PVSAQGRGSASGYTTGSMGYGSGDN 380
Query: 186 TV-LGGSNFERSVSPPAANTNRTT-SCFKYEASYENLYRDDSVFGDPTWQLSFLDLDVTS 359
L G+ + R+ A T+ + S YE SY +LYR SV+GD TWQ + +LD
Sbjct: 381 NYGLSGAGYVRNSGTGAPPTSSFSGSAGGYEGSYGDLYRSGSVYGDSTWQSATPELDGCG 440
Query: 360 SLSYKLGNPDLDITGKEIEDFACGYYAKNKQT 455
S Y LG+ D+T K E + Y ++Q+
Sbjct: 441 SFGYGLGDVASDVTTKSSEGYIGSYGVTSRQS 472
>ref|XP_006474951.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like isoform
X1 [Citrus sinensis] gi|568842022|ref|XP_006474952.1|
PREDICTED: heterogeneous nuclear ribonucleoprotein
1-like isoform X2 [Citrus sinensis]
gi|568842024|ref|XP_006474953.1| PREDICTED:
heterogeneous nuclear ribonucleoprotein 1-like isoform
X3 [Citrus sinensis]
Length = 477
Score = 79.0 bits (193), Expect = 1e-12
Identities = 53/153 (34%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Frame = +3
Query: 6 LNYTVNSTTASASMASGRENLG-SFSNSRLNWASSLPISSQIEGSFSGFWGGNVSC-VGT 179
LN N + A + SG N SF N+ +NW P+S+ GS SG+ G++ G
Sbjct: 322 LNSATNPASPGAFLGSGSGNFEVSFGNNSVNWG---PVSAPGGGSASGYSAGSMGYGSGD 378
Query: 180 DNTVLGGSNFERSVSPPAANTNRTT-SCFKYEASYENLYRDDSVFGDPTWQLSFLDLDVT 356
N LGG F R+ S T+ S YE SY + YR S +GDPTW+ + +LD +
Sbjct: 379 GNYGLGGGGFGRTSSAGVGPTSSFAGSTSGYEGSYGDSYRSGSGYGDPTWRSATPELDGS 438
Query: 357 SSLSYKLGNPDLDITGKEIEDFACGYYAKNKQT 455
S SY LG ++ K E F Y ++Q+
Sbjct: 439 GSFSYGLGTVSTNVAAKSSEGFIGSYNVTSRQS 471
>ref|XP_006452507.1| hypothetical protein CICLE_v10008158mg [Citrus clementina]
gi|567921004|ref|XP_006452508.1| hypothetical protein
CICLE_v10008158mg [Citrus clementina]
gi|567921006|ref|XP_006452509.1| hypothetical protein
CICLE_v10008158mg [Citrus clementina]
gi|567921008|ref|XP_006452510.1| hypothetical protein
CICLE_v10008158mg [Citrus clementina]
gi|557555733|gb|ESR65747.1| hypothetical protein
CICLE_v10008158mg [Citrus clementina]
gi|557555734|gb|ESR65748.1| hypothetical protein
CICLE_v10008158mg [Citrus clementina]
gi|557555735|gb|ESR65749.1| hypothetical protein
CICLE_v10008158mg [Citrus clementina]
gi|557555736|gb|ESR65750.1| hypothetical protein
CICLE_v10008158mg [Citrus clementina]
Length = 477
Score = 79.0 bits (193), Expect = 1e-12
Identities = 53/153 (34%), Positives = 75/153 (49%), Gaps = 3/153 (1%)
Frame = +3
Query: 6 LNYTVNSTTASASMASGRENLG-SFSNSRLNWASSLPISSQIEGSFSGFWGGNVSC-VGT 179
LN N + A + SG N SF N+ +NW P+S+ GS SG+ G++ G
Sbjct: 322 LNSATNPASPGAFLGSGSGNFEVSFGNNSVNWG---PVSAPGGGSASGYSAGSMGYGSGD 378
Query: 180 DNTVLGGSNFERSVSPPAANTNRTT-SCFKYEASYENLYRDDSVFGDPTWQLSFLDLDVT 356
N LGG F R+ S T+ S YE SY + YR S +GDPTW+ + +LD +
Sbjct: 379 GNYGLGGGGFGRTSSAGVGPTSSFAGSTSGYEGSYGDSYRSGSGYGDPTWRSATPELDGS 438
Query: 357 SSLSYKLGNPDLDITGKEIEDFACGYYAKNKQT 455
S SY LG ++ K E F Y ++Q+
Sbjct: 439 GSFSYGLGTVSTNVAAKSSEGFIGSYNVTSRQS 471
>ref|XP_002529044.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis] gi|223531524|gb|EEF33355.1| Heterogeneous
nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
Length = 478
Score = 77.4 bits (189), Expect = 4e-12
Identities = 53/153 (34%), Positives = 78/153 (50%), Gaps = 3/153 (1%)
Frame = +3
Query: 6 LNYTVNSTTASASMASGRENLG-SFSNSRLNWASSLPISSQIEGSFSGFWGGNVSCVGTD 182
LN N + A + SG + G SF NS NW S +S+Q GS S + G++ D
Sbjct: 321 LNSAANPASPGAFLGSGSGSFGVSFGNSGTNWGPS-HVSAQGGGSASAYTSGSMGYGSGD 379
Query: 183 NTV-LGGSNFERSVSPPAA-NTNRTTSCFKYEASYENLYRDDSVFGDPTWQLSFLDLDVT 356
++ LGG + R+ AA N++ S YE SY +LYR SV+GD TW+ +L+ +
Sbjct: 380 SSYGLGGGAYGRNNGSNAAPNSSFAGSNSGYEGSYGDLYRSGSVYGDSTWRSGTPELEGS 439
Query: 357 SSLSYKLGNPDLDITGKEIEDFACGYYAKNKQT 455
S Y L N D+T K E + Y ++Q+
Sbjct: 440 GSFGYGLSNIAADVTAKSSEGYIGSYGVTSRQS 472
>gb|EOY28917.1| RNA-binding family protein isoform 5 [Theobroma cacao]
Length = 482
Score = 75.9 bits (185), Expect = 1e-11
Identities = 52/151 (34%), Positives = 78/151 (51%), Gaps = 3/151 (1%)
Frame = +3
Query: 9 NYTVNSTTASASMASGRENLG--SFSNSRLNWASSLPISSQIEGSFSGFWGGNVSCVGTD 182
NY NSTT+SA + SG N G SF + W SS P Q G+ S + GGN+ D
Sbjct: 321 NYATNSTTSSAIVGSGSGNSGVSSFGSIGALWDSS-PSLGQGGGAASAYNGGNLRYGSGD 379
Query: 183 NTV-LGGSNFERSVSPPAANTNRTTSCFKYEASYENLYRDDSVFGDPTWQLSFLDLDVTS 359
V GG + R+ + +T+ ++ Y+ +Y N+Y + S +GD TW+ S DL+ +S
Sbjct: 380 FGVGSGGIGYGRNSNVAQLSTHGASNG-GYDGAYANIYENGSFYGDSTWRSSPSDLERSS 438
Query: 360 SLSYKLGNPDLDITGKEIEDFACGYYAKNKQ 452
S + LG+ D+ D+ GY N+Q
Sbjct: 439 SFGFGLGDASSDVMTNNSADYIGGYSVTNRQ 469
>gb|EOY28916.1| RNA-binding family protein isoform 4 [Theobroma cacao]
Length = 439
Score = 75.9 bits (185), Expect = 1e-11
Identities = 52/151 (34%), Positives = 78/151 (51%), Gaps = 3/151 (1%)
Frame = +3
Query: 9 NYTVNSTTASASMASGRENLG--SFSNSRLNWASSLPISSQIEGSFSGFWGGNVSCVGTD 182
NY NSTT+SA + SG N G SF + W SS P Q G+ S + GGN+ D
Sbjct: 284 NYATNSTTSSAIVGSGSGNSGVSSFGSIGALWDSS-PSLGQGGGAASAYNGGNLRYGSGD 342
Query: 183 NTV-LGGSNFERSVSPPAANTNRTTSCFKYEASYENLYRDDSVFGDPTWQLSFLDLDVTS 359
V GG + R+ + +T+ ++ Y+ +Y N+Y + S +GD TW+ S DL+ +S
Sbjct: 343 FGVGSGGIGYGRNSNVAQLSTHGASNG-GYDGAYANIYENGSFYGDSTWRSSPSDLERSS 401
Query: 360 SLSYKLGNPDLDITGKEIEDFACGYYAKNKQ 452
S + LG+ D+ D+ GY N+Q
Sbjct: 402 SFGFGLGDASSDVMTNNSADYIGGYSVTNRQ 432
>gb|EOY28915.1| RNA-binding family protein isoform 3 [Theobroma cacao]
Length = 497
Score = 75.9 bits (185), Expect = 1e-11
Identities = 52/151 (34%), Positives = 78/151 (51%), Gaps = 3/151 (1%)
Frame = +3
Query: 9 NYTVNSTTASASMASGRENLG--SFSNSRLNWASSLPISSQIEGSFSGFWGGNVSCVGTD 182
NY NSTT+SA + SG N G SF + W SS P Q G+ S + GGN+ D
Sbjct: 321 NYATNSTTSSAIVGSGSGNSGVSSFGSIGALWDSS-PSLGQGGGAASAYNGGNLRYGSGD 379
Query: 183 NTV-LGGSNFERSVSPPAANTNRTTSCFKYEASYENLYRDDSVFGDPTWQLSFLDLDVTS 359
V GG + R+ + +T+ ++ Y+ +Y N+Y + S +GD TW+ S DL+ +S
Sbjct: 380 FGVGSGGIGYGRNSNVAQLSTHGASNG-GYDGAYANIYENGSFYGDSTWRSSPSDLERSS 438
Query: 360 SLSYKLGNPDLDITGKEIEDFACGYYAKNKQ 452
S + LG+ D+ D+ GY N+Q
Sbjct: 439 SFGFGLGDASSDVMTNNSADYIGGYSVTNRQ 469
>gb|EOY28913.1| RNA-binding family protein isoform 1 [Theobroma cacao]
gi|508781658|gb|EOY28914.1| RNA-binding family protein
isoform 1 [Theobroma cacao]
Length = 476
Score = 75.9 bits (185), Expect = 1e-11
Identities = 52/151 (34%), Positives = 78/151 (51%), Gaps = 3/151 (1%)
Frame = +3
Query: 9 NYTVNSTTASASMASGRENLG--SFSNSRLNWASSLPISSQIEGSFSGFWGGNVSCVGTD 182
NY NSTT+SA + SG N G SF + W SS P Q G+ S + GGN+ D
Sbjct: 321 NYATNSTTSSAIVGSGSGNSGVSSFGSIGALWDSS-PSLGQGGGAASAYNGGNLRYGSGD 379
Query: 183 NTV-LGGSNFERSVSPPAANTNRTTSCFKYEASYENLYRDDSVFGDPTWQLSFLDLDVTS 359
V GG + R+ + +T+ ++ Y+ +Y N+Y + S +GD TW+ S DL+ +S
Sbjct: 380 FGVGSGGIGYGRNSNVAQLSTHGASNG-GYDGAYANIYENGSFYGDSTWRSSPSDLERSS 438
Query: 360 SLSYKLGNPDLDITGKEIEDFACGYYAKNKQ 452
S + LG+ D+ D+ GY N+Q
Sbjct: 439 SFGFGLGDASSDVMTNNSADYIGGYSVTNRQ 469
>ref|XP_002316761.1| hypothetical protein POPTR_0011s09050g [Populus trichocarpa]
gi|566194519|ref|XP_006377630.1| hypothetical protein
POPTR_0011s09050g [Populus trichocarpa]
gi|222859826|gb|EEE97373.1| hypothetical protein
POPTR_0011s09050g [Populus trichocarpa]
gi|550327973|gb|ERP55427.1| hypothetical protein
POPTR_0011s09050g [Populus trichocarpa]
Length = 478
Score = 75.9 bits (185), Expect = 1e-11
Identities = 51/153 (33%), Positives = 76/153 (49%), Gaps = 3/153 (1%)
Frame = +3
Query: 6 LNYTVNSTTASASMASGRENLG-SFSNSRLNWASSLPISSQIEGSFSGFWGGNVSCV-GT 179
LN N + + SG + G SF N+ NW +S +S+Q G SG+ G++ G
Sbjct: 321 LNTATNPGSPGPLVGSGSGSFGVSFGNNGANWGTST-VSAQGGGIASGYTSGSMGYGNGD 379
Query: 180 DNTVLGGSNFERSVSPPAANTNRTT-SCFKYEASYENLYRDDSVFGDPTWQLSFLDLDVT 356
N GGS + R+ T+ + S YE SY LYR SV+GD TW+ + +LD +
Sbjct: 380 SNYSFGGSGYARNSGASVPPTSSFSGSIGGYEGSYGELYRSGSVYGDSTWRTAIPELDGS 439
Query: 357 SSLSYKLGNPDLDITGKEIEDFACGYYAKNKQT 455
S Y LG+ D+T K E + Y ++Q+
Sbjct: 440 GSFGYGLGDVASDVTTKSSEGYIGSYGVTSRQS 472
>ref|XP_006344882.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Solanum
tuberosum]
Length = 475
Score = 73.9 bits (180), Expect = 4e-11
Identities = 49/151 (32%), Positives = 77/151 (50%), Gaps = 1/151 (0%)
Frame = +3
Query: 6 LNYTVNSTTASASMASGRENLGSFSNSRLNWASSLPISSQIEGSFSGFWGGNVSC-VGTD 182
LN + ++ + + SG G F N+ NW SS +S+ + GS SG+ G NV G +
Sbjct: 322 LNSSPGPGSSGSFLGSGTGGYGVFGNNGANWGSSA-VSAPV-GSASGYGGRNVGFRSGGN 379
Query: 183 NTVLGGSNFERSVSPPAANTNRTTSCFKYEASYENLYRDDSVFGDPTWQLSFLDLDVTSS 362
LG RS + T+ S YE SY ++YR S++GD TWQ D++ +++
Sbjct: 380 GYGLGSGGLARSNAAGGVPTSFAASGGAYEGSYGDVYRSGSMYGDSTWQAVSSDMEGSNT 439
Query: 363 LSYKLGNPDLDITGKEIEDFACGYYAKNKQT 455
Y L NP D + K+ E++ Y N+Q+
Sbjct: 440 FGYGLENP-ADDSAKDSENYIGNYSIANRQS 469