BLASTX nr result
ID: Zingiber23_contig00047880
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00047880
(254 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006586878.1| PREDICTED: F-box protein At5g49610-like isof... 81 2e-13
ref|XP_003533129.1| PREDICTED: F-box protein At5g49610-like isof... 81 2e-13
ref|XP_002519272.1| conserved hypothetical protein [Ricinus comm... 81 2e-13
gb|ESW19385.1| hypothetical protein PHAVU_006G120400g [Phaseolus... 80 2e-13
gb|AFK41573.1| unknown [Lotus japonicus] 79 8e-13
ref|XP_006281828.1| hypothetical protein CARUB_v10028016mg [Caps... 77 3e-12
ref|XP_004295046.1| PREDICTED: F-box protein At5g49610-like isof... 74 2e-11
ref|NP_199772.1| F-box protein [Arabidopsis thaliana] gi|7526245... 74 2e-11
ref|XP_004486527.1| PREDICTED: F-box protein At5g49610-like isof... 74 2e-11
ref|XP_002865744.1| F-box family protein [Arabidopsis lyrata sub... 74 2e-11
ref|XP_003594683.1| F-box protein [Medicago truncatula] gi|21707... 74 3e-11
gb|ACJ84251.1| unknown [Medicago truncatula] 74 3e-11
gb|AAM60856.1| unknown [Arabidopsis thaliana] 73 3e-11
ref|XP_002316055.1| hypothetical protein POPTR_0010s15890g [Popu... 70 2e-10
ref|XP_006395047.1| hypothetical protein EUTSA_v10004464mg [Eutr... 70 4e-10
ref|XP_006488798.1| PREDICTED: F-box protein At5g49610-like [Cit... 69 6e-10
ref|XP_006419316.1| hypothetical protein CICLE_v10005014mg [Citr... 69 6e-10
gb|EMJ23311.1| hypothetical protein PRUPE_ppa007667mg [Prunus pe... 67 2e-09
ref|XP_002273848.1| PREDICTED: F-box protein At5g49610-like [Vit... 66 5e-09
ref|XP_004252932.1| PREDICTED: F-box protein At5g49610-like [Sol... 63 5e-08
>ref|XP_006586878.1| PREDICTED: F-box protein At5g49610-like isoform X2 [Glycine max]
Length = 360
Score = 80.9 bits (198), Expect = 2e-13
Identities = 40/85 (47%), Positives = 60/85 (70%), Gaps = 4/85 (4%)
Frame = +2
Query: 11 NGCLPVDLLVQILARLPVKSLFRFRSVCKILCRLPFEKHFIELYFRTAPKDPILLLEYPE 190
+G P ++++QILARLPVKSLFRF++VCK+ RL +K+FI+LY + K+P++L+E +
Sbjct: 6 DGIFPDEVVIQILARLPVKSLFRFKTVCKLWYRLSLDKYFIQLYNEVSRKNPMILVEISD 65
Query: 191 SG----AFLSVDRFRDVSPFALGFL 253
S + + VD R VS F+L FL
Sbjct: 66 SSESKTSLICVDNLRGVSEFSLNFL 90
>ref|XP_003533129.1| PREDICTED: F-box protein At5g49610-like isoform X1 [Glycine max]
Length = 372
Score = 80.9 bits (198), Expect = 2e-13
Identities = 40/85 (47%), Positives = 60/85 (70%), Gaps = 4/85 (4%)
Frame = +2
Query: 11 NGCLPVDLLVQILARLPVKSLFRFRSVCKILCRLPFEKHFIELYFRTAPKDPILLLEYPE 190
+G P ++++QILARLPVKSLFRF++VCK+ RL +K+FI+LY + K+P++L+E +
Sbjct: 18 DGIFPDEVVIQILARLPVKSLFRFKTVCKLWYRLSLDKYFIQLYNEVSRKNPMILVEISD 77
Query: 191 SG----AFLSVDRFRDVSPFALGFL 253
S + + VD R VS F+L FL
Sbjct: 78 SSESKTSLICVDNLRGVSEFSLNFL 102
>ref|XP_002519272.1| conserved hypothetical protein [Ricinus communis]
gi|223541587|gb|EEF43136.1| conserved hypothetical
protein [Ricinus communis]
Length = 325
Score = 80.9 bits (198), Expect = 2e-13
Identities = 41/85 (48%), Positives = 60/85 (70%), Gaps = 4/85 (4%)
Frame = +2
Query: 11 NGCLPVDLLVQILARLPVKSLFRFRSVCKILCRLPFEKHFIELYFRTAPKDPILLLEYPE 190
NG LP ++++QILARLPVKSLFR ++VCK+ RL +K+FI+LY A ++P++L+E +
Sbjct: 5 NGILPDEIVLQILARLPVKSLFRAKTVCKLWYRLSLDKYFIQLYNEVAARNPMVLVEISD 64
Query: 191 S----GAFLSVDRFRDVSPFALGFL 253
S + L +D R VS F+L FL
Sbjct: 65 SSESKSSLLCIDNLRGVSEFSLDFL 89
>gb|ESW19385.1| hypothetical protein PHAVU_006G120400g [Phaseolus vulgaris]
Length = 349
Score = 80.5 bits (197), Expect = 2e-13
Identities = 39/85 (45%), Positives = 59/85 (69%), Gaps = 4/85 (4%)
Frame = +2
Query: 11 NGCLPVDLLVQILARLPVKSLFRFRSVCKILCRLPFEKHFIELYFRTAPKDPILLLE--- 181
+G P ++++QILARLPVKSLFRF++VCK+ RL +K+F++LY + K+P++L+E
Sbjct: 6 DGIFPDEVVIQILARLPVKSLFRFKTVCKLWNRLSLDKYFVQLYNEVSRKNPMILVEVSD 65
Query: 182 -YPESGAFLSVDRFRDVSPFALGFL 253
Y + + VD R VS F+L FL
Sbjct: 66 SYGSKSSLICVDNLRGVSEFSLSFL 90
>gb|AFK41573.1| unknown [Lotus japonicus]
Length = 360
Score = 78.6 bits (192), Expect = 8e-13
Identities = 38/85 (44%), Positives = 60/85 (70%), Gaps = 4/85 (4%)
Frame = +2
Query: 11 NGCLPVDLLVQILARLPVKSLFRFRSVCKILCRLPFEKHFIELYFRTAPKDPILLLEYPE 190
+G P ++++QILARLPVKSLFR ++VCK+ CRL +K+F++LY + K+P++L+E +
Sbjct: 6 DGIFPDEVVMQILARLPVKSLFRSKTVCKLWCRLSSDKYFVQLYNEVSRKNPMILVEISD 65
Query: 191 S----GAFLSVDRFRDVSPFALGFL 253
+ + + VD R VS F+L FL
Sbjct: 66 TSESKSSLICVDSLRGVSEFSLSFL 90
>ref|XP_006281828.1| hypothetical protein CARUB_v10028016mg [Capsella rubella]
gi|482550532|gb|EOA14726.1| hypothetical protein
CARUB_v10028016mg [Capsella rubella]
Length = 358
Score = 76.6 bits (187), Expect = 3e-12
Identities = 38/77 (49%), Positives = 54/77 (70%)
Frame = +2
Query: 23 PVDLLVQILARLPVKSLFRFRSVCKILCRLPFEKHFIELYFRTAPKDPILLLEYPESGAF 202
P ++++QILARLPVKSLFRF+SVCK RL +K+F L+ + + KD +L+ E +S +
Sbjct: 10 PDEVILQILARLPVKSLFRFKSVCKSWYRLTSDKYFTTLFNQVSVKDQLLVAEVSDSSSL 69
Query: 203 LSVDRFRDVSPFALGFL 253
+ VD R VS +LGFL
Sbjct: 70 ICVDNLRGVSELSLGFL 86
>ref|XP_004295046.1| PREDICTED: F-box protein At5g49610-like isoform 1 [Fragaria vesca
subsp. vesca]
Length = 361
Score = 74.3 bits (181), Expect = 2e-11
Identities = 40/88 (45%), Positives = 59/88 (67%), Gaps = 4/88 (4%)
Frame = +2
Query: 2 SDFNGCLPVDLLVQILARLPVKSLFRFRSVCKILCRLPFEKHFIELYFRTAPKDPILLLE 181
S +G P ++++QIL+RLP+KSLFR ++VCK+ CRL +K+FI+LY A K+ +LL+E
Sbjct: 3 SQRHGFFPDEVVLQILSRLPIKSLFRSKTVCKLWCRLVSDKYFIQLYNELAVKNSMLLVE 62
Query: 182 YPES----GAFLSVDRFRDVSPFALGFL 253
ES + + VD + V F LGFL
Sbjct: 63 VSESSGLKSSLICVDDQKGVCEFDLGFL 90
>ref|NP_199772.1| F-box protein [Arabidopsis thaliana]
gi|75262459|sp|Q9FGY4.1|FB341_ARATH RecName: Full=F-box
protein At5g49610 gi|10177628|dbj|BAB10775.1| unnamed
protein product [Arabidopsis thaliana]
gi|109946405|gb|ABG48381.1| At5g49610 [Arabidopsis
thaliana] gi|332008452|gb|AED95835.1| F-box protein
[Arabidopsis thaliana]
Length = 359
Score = 74.3 bits (181), Expect = 2e-11
Identities = 36/77 (46%), Positives = 54/77 (70%)
Frame = +2
Query: 23 PVDLLVQILARLPVKSLFRFRSVCKILCRLPFEKHFIELYFRTAPKDPILLLEYPESGAF 202
P ++++QILARLPVKSLFRF+SVCK RLP +K+F L+ + + K+ +L+ E +S +
Sbjct: 10 PDEVILQILARLPVKSLFRFKSVCKSWYRLPSDKYFTSLFNQLSVKEQLLVAEVSDSSSL 69
Query: 203 LSVDRFRDVSPFALGFL 253
+ VD R VS +L F+
Sbjct: 70 ICVDNLRGVSELSLDFV 86
>ref|XP_004486527.1| PREDICTED: F-box protein At5g49610-like isoform X1 [Cicer
arietinum] gi|502080326|ref|XP_004486528.1| PREDICTED:
F-box protein At5g49610-like isoform X2 [Cicer
arietinum]
Length = 361
Score = 73.9 bits (180), Expect = 2e-11
Identities = 38/86 (44%), Positives = 58/86 (67%), Gaps = 5/86 (5%)
Frame = +2
Query: 11 NGCLPVDLLVQILARLPVKSLFRFRSVCKILCRLPFEKHFIELYFRTAPKDPILLLEYPE 190
+G P ++++QILARLPVKSLFR ++VCK+ RL + +FI+LY + K+P++L+E +
Sbjct: 6 DGIFPDEVVMQILARLPVKSLFRTKTVCKLWNRLSLDNYFIQLYNEISRKNPMILVEISD 65
Query: 191 S-----GAFLSVDRFRDVSPFALGFL 253
S + + VD R VS F+L FL
Sbjct: 66 SLLESKSSLICVDNLRGVSEFSLNFL 91
>ref|XP_002865744.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
gi|297311579|gb|EFH42003.1| F-box family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 358
Score = 73.9 bits (180), Expect = 2e-11
Identities = 36/77 (46%), Positives = 53/77 (68%)
Frame = +2
Query: 23 PVDLLVQILARLPVKSLFRFRSVCKILCRLPFEKHFIELYFRTAPKDPILLLEYPESGAF 202
P ++++QILARLPVKSLFRF+SVCK RLP +K+F L+ + + KD +L+ E +S +
Sbjct: 10 PDEVILQILARLPVKSLFRFKSVCKSWYRLPSDKYFTSLFNKVSVKDQLLVAEVSDSSSL 69
Query: 203 LSVDRFRDVSPFALGFL 253
+ VD VS +L F+
Sbjct: 70 ICVDNLGGVSELSLDFV 86
>ref|XP_003594683.1| F-box protein [Medicago truncatula] gi|217074110|gb|ACJ85415.1|
unknown [Medicago truncatula]
gi|355483731|gb|AES64934.1| F-box protein [Medicago
truncatula]
Length = 361
Score = 73.6 bits (179), Expect = 3e-11
Identities = 38/86 (44%), Positives = 58/86 (67%), Gaps = 5/86 (5%)
Frame = +2
Query: 11 NGCLPVDLLVQILARLPVKSLFRFRSVCKILCRLPFEKHFIELYFRTAPKDPILLLEYPE 190
+G P ++++QILARLPVKSLFR ++VCK+ RL +K+FI+LY + K+P++L+E +
Sbjct: 6 DGIFPDEVVMQILARLPVKSLFRSKTVCKLWYRLTLDKYFIQLYNDVSRKNPMILVEISD 65
Query: 191 S-----GAFLSVDRFRDVSPFALGFL 253
S + + VD R V F+L FL
Sbjct: 66 SLLESKSSLICVDNLRGVFEFSLNFL 91
>gb|ACJ84251.1| unknown [Medicago truncatula]
Length = 361
Score = 73.6 bits (179), Expect = 3e-11
Identities = 38/86 (44%), Positives = 58/86 (67%), Gaps = 5/86 (5%)
Frame = +2
Query: 11 NGCLPVDLLVQILARLPVKSLFRFRSVCKILCRLPFEKHFIELYFRTAPKDPILLLEYPE 190
+G P ++++QILARLPVKSLFR ++VCK+ RL +K+FI+LY + K+P++L+E +
Sbjct: 6 DGIFPDEVVMQILARLPVKSLFRSKTVCKLWYRLTLDKYFIQLYNDVSRKNPMILVEISD 65
Query: 191 S-----GAFLSVDRFRDVSPFALGFL 253
S + + VD R V F+L FL
Sbjct: 66 SLLESKSSLICVDNLRGVFEFSLNFL 91
>gb|AAM60856.1| unknown [Arabidopsis thaliana]
Length = 359
Score = 73.2 bits (178), Expect = 3e-11
Identities = 35/77 (45%), Positives = 54/77 (70%)
Frame = +2
Query: 23 PVDLLVQILARLPVKSLFRFRSVCKILCRLPFEKHFIELYFRTAPKDPILLLEYPESGAF 202
P ++++QILARLPVKSLFRF+SVCK RLP +K+F L+ + + K+ +L+ + +S +
Sbjct: 10 PDEVILQILARLPVKSLFRFKSVCKSWYRLPSDKYFTSLFNQLSVKEQLLVAQVSDSSSL 69
Query: 203 LSVDRFRDVSPFALGFL 253
+ VD R VS +L F+
Sbjct: 70 ICVDNLRGVSELSLDFV 86
>ref|XP_002316055.1| hypothetical protein POPTR_0010s15890g [Populus trichocarpa]
gi|222865095|gb|EEF02226.1| hypothetical protein
POPTR_0010s15890g [Populus trichocarpa]
Length = 359
Score = 70.5 bits (171), Expect = 2e-10
Identities = 35/85 (41%), Positives = 57/85 (67%), Gaps = 4/85 (4%)
Frame = +2
Query: 11 NGCLPVDLLVQILARLPVKSLFRFRSVCKILCRLPFEKHFIELYFRTAPKDPILLLEYPE 190
+G LP ++++Q+LARLPVKSLFR ++VCK+ +L +K+F++LY A K+ ++L+E +
Sbjct: 5 DGFLPDEVIIQVLARLPVKSLFRAKTVCKLWYKLSSDKYFVQLYNEVATKNSMVLVEVSD 64
Query: 191 S----GAFLSVDRFRDVSPFALGFL 253
S + + D R VS +L FL
Sbjct: 65 SPELKSSLICADNLRGVSELSLDFL 89
>ref|XP_006395047.1| hypothetical protein EUTSA_v10004464mg [Eutrema salsugineum]
gi|557091686|gb|ESQ32333.1| hypothetical protein
EUTSA_v10004464mg [Eutrema salsugineum]
Length = 362
Score = 69.7 bits (169), Expect = 4e-10
Identities = 36/81 (44%), Positives = 54/81 (66%), Gaps = 4/81 (4%)
Frame = +2
Query: 23 PVDLLVQILARLPVKSLFRFRSVCKILCRLPFEKHFIELYFRTAPKDPILLLEYPES--- 193
P ++++QILAR+PVKSLFRF+SVCK RLP + +F LY + + K+ +L+ E +S
Sbjct: 10 PDEVILQILARVPVKSLFRFKSVCKTWYRLPSDNYFTTLYNQVSVKEQMLVAEVSDSSES 69
Query: 194 -GAFLSVDRFRDVSPFALGFL 253
+ + VD + VS +LGFL
Sbjct: 70 KSSLICVDNLKGVSELSLGFL 90
>ref|XP_006488798.1| PREDICTED: F-box protein At5g49610-like [Citrus sinensis]
Length = 353
Score = 68.9 bits (167), Expect = 6e-10
Identities = 37/83 (44%), Positives = 55/83 (66%), Gaps = 3/83 (3%)
Frame = +2
Query: 14 GCLPVDLLVQILARLPVKSLFRFRSVCKILCRLPFEKHFIELYFRTAPKDPILLLEYP-- 187
G P +++ QILARLPVKSLFR ++VCK+ +L +K+FI LY + K+P+LL++
Sbjct: 2 GFFPDEVIQQILARLPVKSLFRTKTVCKLWNKLTSDKYFIRLYNEVSSKNPMLLVQISDL 61
Query: 188 -ESGAFLSVDRFRDVSPFALGFL 253
ES + VD +R V+ +L FL
Sbjct: 62 IESKGVICVDNWRGVTEISLDFL 84
>ref|XP_006419316.1| hypothetical protein CICLE_v10005014mg [Citrus clementina]
gi|557521189|gb|ESR32556.1| hypothetical protein
CICLE_v10005014mg [Citrus clementina]
Length = 429
Score = 68.9 bits (167), Expect = 6e-10
Identities = 37/83 (44%), Positives = 55/83 (66%), Gaps = 3/83 (3%)
Frame = +2
Query: 14 GCLPVDLLVQILARLPVKSLFRFRSVCKILCRLPFEKHFIELYFRTAPKDPILLLEYP-- 187
G P +++ QILARLPVKSLFR ++VCK+ +L +K+FI LY + K+P+LL++
Sbjct: 78 GFFPDEVIQQILARLPVKSLFRTKTVCKLWNKLTSDKYFIRLYNEVSSKNPMLLVQISDL 137
Query: 188 -ESGAFLSVDRFRDVSPFALGFL 253
ES + VD +R V+ +L FL
Sbjct: 138 IESKGVICVDNWRGVTEISLDFL 160
>gb|EMJ23311.1| hypothetical protein PRUPE_ppa007667mg [Prunus persica]
Length = 360
Score = 67.0 bits (162), Expect = 2e-09
Identities = 36/81 (44%), Positives = 54/81 (66%), Gaps = 4/81 (4%)
Frame = +2
Query: 23 PVDLLVQILARLPVKSLFRFRSVCKILCRLPFEKHFIELYFRTAPKDPILLLEYPES--- 193
P ++++QIL+RLP+KSLFR ++VCK+ RL +K+FI LY + K+P+LL+E +S
Sbjct: 10 PDEVVLQILSRLPIKSLFRSKTVCKLWYRLVSDKYFIHLYNEVSAKNPMLLVEVSDSLGS 69
Query: 194 -GAFLSVDRFRDVSPFALGFL 253
+ VD R VS F+L L
Sbjct: 70 RSNLIVVDNQRGVSEFSLDLL 90
>ref|XP_002273848.1| PREDICTED: F-box protein At5g49610-like [Vitis vinifera]
Length = 357
Score = 65.9 bits (159), Expect = 5e-09
Identities = 34/85 (40%), Positives = 54/85 (63%), Gaps = 4/85 (4%)
Frame = +2
Query: 11 NGCLPVDLLVQILARLPVKSLFRFRSVCKILCRLPFEKHFIELYFRTAPKDPILLLEYPE 190
+G P ++++QILARLPVKS+FR + VC + +L +K+F+ LY + K P++L+E +
Sbjct: 3 SGVFPEEVILQILARLPVKSVFRSKCVCTLWYKLCSDKYFVRLYNQVWVKKPVVLIEVTD 62
Query: 191 S----GAFLSVDRFRDVSPFALGFL 253
S + + VD R VS +L FL
Sbjct: 63 SLECKSSLICVDNLRGVSELSLDFL 87
>ref|XP_004252932.1| PREDICTED: F-box protein At5g49610-like [Solanum lycopersicum]
Length = 360
Score = 62.8 bits (151), Expect = 5e-08
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 5/85 (5%)
Frame = +2
Query: 14 GCLPVDLLVQILARLPVKSLFRFRSVCKILCRLPFEKHFIELYFRTAPKDPILLLEYPE- 190
G P ++++QILARLPVKS+F+ + VCK+ +L +K+F LY + K+P++L++ E
Sbjct: 6 GVFPDEVILQILARLPVKSVFKTKVVCKVWYKLISDKYFTNLYNELSVKNPMVLVQISEP 65
Query: 191 ----SGAFLSVDRFRDVSPFALGFL 253
+ + VD + VS F+L F+
Sbjct: 66 SSESRSSLICVDNLKGVSEFSLDFV 90