BLASTX nr result
ID: Zingiber23_contig00047878
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00047878
(282 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006648913.1| PREDICTED: pentatricopeptide repeat-containi... 75 7e-12
dbj|BAD27693.1| pentatricopeptide (PPR) repeat-containing protei... 75 9e-12
gb|EEC73741.1| hypothetical protein OsI_08374 [Oryza sativa Indi... 75 9e-12
gb|AEP33770.1| organelle transcript processing 82, partial [Raph... 73 3e-11
ref|NP_198751.1| pentatricopeptide repeat-containing protein [Ar... 72 6e-11
ref|XP_002870791.1| pentatricopeptide repeat-containing protein ... 72 6e-11
emb|CBI24015.3| unnamed protein product [Vitis vinifera] 71 2e-10
ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containi... 71 2e-10
gb|EXB37173.1| hypothetical protein L484_013537 [Morus notabilis] 70 2e-10
ref|XP_004955129.1| PREDICTED: pentatricopeptide repeat-containi... 70 2e-10
gb|EMJ27978.1| hypothetical protein PRUPE_ppa018015mg [Prunus pe... 70 4e-10
gb|AEP33759.1| organelle transcript processing 82, partial [Bras... 70 4e-10
ref|XP_002452788.1| hypothetical protein SORBIDRAFT_04g032540 [S... 70 4e-10
ref|XP_004231316.1| PREDICTED: pentatricopeptide repeat-containi... 69 5e-10
ref|XP_006342693.1| PREDICTED: pentatricopeptide repeat-containi... 69 6e-10
ref|XP_006285062.1| hypothetical protein CARUB_v10006375mg [Caps... 69 6e-10
gb|EMT04439.1| hypothetical protein F775_19266 [Aegilops tauschii] 69 6e-10
ref|XP_004253185.1| PREDICTED: pentatricopeptide repeat-containi... 69 6e-10
ref|XP_006358473.1| PREDICTED: pentatricopeptide repeat-containi... 68 1e-09
ref|XP_002305373.2| hypothetical protein POPTR_0004s12330g [Popu... 68 1e-09
>ref|XP_006648913.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Oryza brachyantha]
Length = 673
Score = 75.5 bits (184), Expect = 7e-12
Identities = 35/48 (72%), Positives = 39/48 (81%)
Frame = +1
Query: 1 IEPENTGNYVLLGNIYAAAGRWEDVESVRGLMTGRGLRKAPGSSLIEA 144
I+PENTGNYVLLGNIYAA RW DV+ VR +M RGL K PGSSL+EA
Sbjct: 611 IDPENTGNYVLLGNIYAAVNRWRDVQDVRRMMVERGLIKEPGSSLVEA 658
>dbj|BAD27693.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group] gi|222623393|gb|EEE57525.1|
hypothetical protein OsJ_07836 [Oryza sativa Japonica
Group]
Length = 667
Score = 75.1 bits (183), Expect = 9e-12
Identities = 34/49 (69%), Positives = 41/49 (83%)
Frame = +1
Query: 1 IEPENTGNYVLLGNIYAAAGRWEDVESVRGLMTGRGLRKAPGSSLIEAK 147
++PENTG+YVLLGNIYAAA RW DV+ VR +M RGL K PGSSL+EA+
Sbjct: 610 LDPENTGSYVLLGNIYAAADRWRDVQDVRRMMVERGLLKEPGSSLVEAR 658
>gb|EEC73741.1| hypothetical protein OsI_08374 [Oryza sativa Indica Group]
Length = 667
Score = 75.1 bits (183), Expect = 9e-12
Identities = 34/49 (69%), Positives = 41/49 (83%)
Frame = +1
Query: 1 IEPENTGNYVLLGNIYAAAGRWEDVESVRGLMTGRGLRKAPGSSLIEAK 147
++PENTG+YVLLGNIYAAA RW DV+ VR +M RGL K PGSSL+EA+
Sbjct: 610 LDPENTGSYVLLGNIYAAADRWRDVQDVRRMMVERGLLKEPGSSLVEAR 658
>gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
Length = 675
Score = 73.2 bits (178), Expect = 3e-11
Identities = 32/47 (68%), Positives = 39/47 (82%)
Frame = +1
Query: 1 IEPENTGNYVLLGNIYAAAGRWEDVESVRGLMTGRGLRKAPGSSLIE 141
IEPEN+G+YVLL NIYA AGRWEDV VRG++ G+G++K PG S IE
Sbjct: 501 IEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIE 547
>ref|NP_198751.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171567|sp|Q9FLZ9.1|PP405_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g39350 gi|10177683|dbj|BAB11009.1| selenium-binding
protein-like [Arabidopsis thaliana]
gi|332007040|gb|AED94423.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 677
Score = 72.4 bits (176), Expect = 6e-11
Identities = 33/49 (67%), Positives = 38/49 (77%)
Frame = +1
Query: 1 IEPENTGNYVLLGNIYAAAGRWEDVESVRGLMTGRGLRKAPGSSLIEAK 147
+EPENTGNYVLL NIYAA GRW+D+E VR +M GLRK PG S IE +
Sbjct: 622 LEPENTGNYVLLANIYAALGRWKDMEKVRSMMENVGLRKKPGHSTIEIR 670
>ref|XP_002870791.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297316627|gb|EFH47050.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 674
Score = 72.4 bits (176), Expect = 6e-11
Identities = 33/49 (67%), Positives = 38/49 (77%)
Frame = +1
Query: 1 IEPENTGNYVLLGNIYAAAGRWEDVESVRGLMTGRGLRKAPGSSLIEAK 147
+EPENTGNYVLL NIYAA GRW+D+E VR +M GLRK PG S IE +
Sbjct: 622 LEPENTGNYVLLANIYAALGRWKDMEKVRNMMENVGLRKKPGHSTIEIR 670
>emb|CBI24015.3| unnamed protein product [Vitis vinifera]
Length = 569
Score = 70.9 bits (172), Expect = 2e-10
Identities = 31/49 (63%), Positives = 40/49 (81%)
Frame = +1
Query: 1 IEPENTGNYVLLGNIYAAAGRWEDVESVRGLMTGRGLRKAPGSSLIEAK 147
+EP N+G YVLL N+YA+AGRWEDV VR LM RG++KAPG S+IE++
Sbjct: 395 LEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESE 443
>ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 624
Score = 70.9 bits (172), Expect = 2e-10
Identities = 31/49 (63%), Positives = 40/49 (81%)
Frame = +1
Query: 1 IEPENTGNYVLLGNIYAAAGRWEDVESVRGLMTGRGLRKAPGSSLIEAK 147
+EP N+G YVLL N+YA+AGRWEDV VR LM RG++KAPG S+IE++
Sbjct: 450 LEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRGVKKAPGFSMIESE 498
>gb|EXB37173.1| hypothetical protein L484_013537 [Morus notabilis]
Length = 312
Score = 70.5 bits (171), Expect = 2e-10
Identities = 30/49 (61%), Positives = 39/49 (79%)
Frame = +1
Query: 1 IEPENTGNYVLLGNIYAAAGRWEDVESVRGLMTGRGLRKAPGSSLIEAK 147
+EP+++GNY+LL NIY+AAGRWED +RGLM RG+ K+PG S IE K
Sbjct: 138 LEPQSSGNYILLANIYSAAGRWEDAAKIRGLMKERGVTKSPGCSWIEVK 186
>ref|XP_004955129.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39350-like [Setaria italica]
Length = 661
Score = 70.5 bits (171), Expect = 2e-10
Identities = 31/49 (63%), Positives = 40/49 (81%)
Frame = +1
Query: 1 IEPENTGNYVLLGNIYAAAGRWEDVESVRGLMTGRGLRKAPGSSLIEAK 147
+EPENT NYVLLG +YAAA RW DV+ +R +M +GLRK PGSS+++AK
Sbjct: 609 LEPENTENYVLLGKVYAAADRWADVQDLRRMMEEKGLRKNPGSSVVDAK 657
>gb|EMJ27978.1| hypothetical protein PRUPE_ppa018015mg [Prunus persica]
Length = 624
Score = 69.7 bits (169), Expect = 4e-10
Identities = 31/47 (65%), Positives = 38/47 (80%)
Frame = +1
Query: 1 IEPENTGNYVLLGNIYAAAGRWEDVESVRGLMTGRGLRKAPGSSLIE 141
+EPEN+G YVLL N+YA AGRWEDV +VR LM RG++K PG S+IE
Sbjct: 450 LEPENSGRYVLLANLYANAGRWEDVANVRRLMNDRGVKKVPGFSMIE 496
>gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 69.7 bits (169), Expect = 4e-10
Identities = 30/47 (63%), Positives = 38/47 (80%)
Frame = +1
Query: 1 IEPENTGNYVLLGNIYAAAGRWEDVESVRGLMTGRGLRKAPGSSLIE 141
IEPEN+G+YVLL NIYA AGRWEDV +R ++ G+G++K PG S IE
Sbjct: 517 IEPENSGSYVLLSNIYATAGRWEDVARIREVLNGKGMKKVPGCSSIE 563
>ref|XP_002452788.1| hypothetical protein SORBIDRAFT_04g032540 [Sorghum bicolor]
gi|241932619|gb|EES05764.1| hypothetical protein
SORBIDRAFT_04g032540 [Sorghum bicolor]
Length = 662
Score = 69.7 bits (169), Expect = 4e-10
Identities = 30/49 (61%), Positives = 39/49 (79%)
Frame = +1
Query: 1 IEPENTGNYVLLGNIYAAAGRWEDVESVRGLMTGRGLRKAPGSSLIEAK 147
+EP+N GNYVLLG +YAAA RW DV+ + +M GRGL K PGSS+++AK
Sbjct: 610 LEPDNVGNYVLLGKVYAAADRWSDVQDLWRVMEGRGLHKDPGSSVVDAK 658
>ref|XP_004231316.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Solanum lycopersicum]
Length = 758
Score = 69.3 bits (168), Expect = 5e-10
Identities = 34/49 (69%), Positives = 39/49 (79%)
Frame = +1
Query: 1 IEPENTGNYVLLGNIYAAAGRWEDVESVRGLMTGRGLRKAPGSSLIEAK 147
IEPEN+GNYVLL NIYA+A RWEDV+ VRGLMT G++K G S IE K
Sbjct: 584 IEPENSGNYVLLSNIYASARRWEDVDRVRGLMTIGGVKKTTGWSWIEHK 632
>ref|XP_006342693.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Solanum tuberosum]
Length = 628
Score = 68.9 bits (167), Expect = 6e-10
Identities = 29/47 (61%), Positives = 38/47 (80%)
Frame = +1
Query: 1 IEPENTGNYVLLGNIYAAAGRWEDVESVRGLMTGRGLRKAPGSSLIE 141
+EP+N+G YVLL N+YA AGRWEDV S+R LM RG++K PG S++E
Sbjct: 454 LEPQNSGRYVLLANLYAYAGRWEDVASIRKLMNDRGVKKVPGFSIVE 500
>ref|XP_006285062.1| hypothetical protein CARUB_v10006375mg [Capsella rubella]
gi|482553767|gb|EOA17960.1| hypothetical protein
CARUB_v10006375mg [Capsella rubella]
Length = 673
Score = 68.9 bits (167), Expect = 6e-10
Identities = 30/49 (61%), Positives = 37/49 (75%)
Frame = +1
Query: 1 IEPENTGNYVLLGNIYAAAGRWEDVESVRGLMTGRGLRKAPGSSLIEAK 147
+EPENTGNYVLL N+Y A GRW+D+E VR +M GLRK PG S +E +
Sbjct: 621 LEPENTGNYVLLANMYGALGRWKDMEKVRNMMEDVGLRKKPGHSTVEMR 669
>gb|EMT04439.1| hypothetical protein F775_19266 [Aegilops tauschii]
Length = 566
Score = 68.9 bits (167), Expect = 6e-10
Identities = 32/48 (66%), Positives = 39/48 (81%)
Frame = +1
Query: 1 IEPENTGNYVLLGNIYAAAGRWEDVESVRGLMTGRGLRKAPGSSLIEA 144
+EP+NTGN+VLLGNIYAAA RW DV+ V +M +GL K PGSSL+EA
Sbjct: 509 LEPDNTGNHVLLGNIYAAADRWNDVQDVWKMMGRKGLIKEPGSSLVEA 556
>ref|XP_004253185.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Solanum lycopersicum]
Length = 626
Score = 68.9 bits (167), Expect = 6e-10
Identities = 29/47 (61%), Positives = 38/47 (80%)
Frame = +1
Query: 1 IEPENTGNYVLLGNIYAAAGRWEDVESVRGLMTGRGLRKAPGSSLIE 141
+EP+N+G YVLL N+YA AGRWEDV S+R LM RG++K PG S++E
Sbjct: 452 LEPQNSGRYVLLANLYANAGRWEDVASIRKLMNDRGVKKVPGFSIVE 498
>ref|XP_006358473.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g14470-like [Solanum tuberosum]
Length = 758
Score = 68.2 bits (165), Expect = 1e-09
Identities = 33/47 (70%), Positives = 38/47 (80%)
Frame = +1
Query: 1 IEPENTGNYVLLGNIYAAAGRWEDVESVRGLMTGRGLRKAPGSSLIE 141
IEPEN+GNYVLL NIYA+A RWEDV+ VRGLMT G++K G S IE
Sbjct: 584 IEPENSGNYVLLSNIYASARRWEDVDRVRGLMTIGGVKKTTGWSWIE 630
>ref|XP_002305373.2| hypothetical protein POPTR_0004s12330g [Populus trichocarpa]
gi|550340892|gb|EEE85884.2| hypothetical protein
POPTR_0004s12330g [Populus trichocarpa]
Length = 672
Score = 68.2 bits (165), Expect = 1e-09
Identities = 33/48 (68%), Positives = 36/48 (75%)
Frame = +1
Query: 1 IEPENTGNYVLLGNIYAAAGRWEDVESVRGLMTGRGLRKAPGSSLIEA 144
+EP NTGNYVLL +YAA GRWED E+VR M GLRKAP SLIEA
Sbjct: 620 LEPGNTGNYVLLAKLYAALGRWEDAENVRQRMDDIGLRKAPAHSLIEA 667