BLASTX nr result
ID: Zingiber23_contig00047732
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00047732
(636 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006342124.1| PREDICTED: putative F-box protein At3g25750-... 64 4e-08
ref|XP_004958881.1| PREDICTED: F-box protein SKIP23-like [Setari... 61 3e-07
gb|EMT15577.1| hypothetical protein F775_11437 [Aegilops tauschii] 60 7e-07
ref|NP_001068159.1| Os11g0582700 [Oryza sativa Japonica Group] g... 59 9e-07
gb|EEE52347.1| hypothetical protein OsJ_34387 [Oryza sativa Japo... 59 9e-07
gb|EEC76082.1| hypothetical protein OsI_13313 [Oryza sativa Indi... 59 2e-06
gb|EMT05686.1| hypothetical protein F775_10941 [Aegilops tauschii] 57 3e-06
dbj|BAJ99074.1| predicted protein [Hordeum vulgare subsp. vulgar... 56 8e-06
gb|EEE59824.1| hypothetical protein OsJ_12379 [Oryza sativa Japo... 56 8e-06
gb|EEC68427.1| hypothetical protein OsI_36609 [Oryza sativa Indi... 56 8e-06
ref|NP_001051100.1| Os03g0720400 [Oryza sativa Japonica Group] g... 56 8e-06
>ref|XP_006342124.1| PREDICTED: putative F-box protein At3g25750-like isoform X1
[Solanum tuberosum] gi|565350334|ref|XP_006342125.1|
PREDICTED: putative F-box protein At3g25750-like isoform
X2 [Solanum tuberosum]
Length = 372
Score = 63.9 bits (154), Expect = 4e-08
Identities = 58/211 (27%), Positives = 90/211 (42%), Gaps = 27/211 (12%)
Frame = -1
Query: 633 GDEKWTMIP--RDLY-YYANIAFHDGKLYAVLKSKENKKTIVAAYDLCVPNSTPTRVR-- 469
GD WT IP + Y +Y I + +G+LY N + +V+A D+ P++ V+
Sbjct: 173 GDLCWTKIPIGEETYAFYHMIQYFNGQLYF-----NNGRCLVSAIDIPEPSNPQPIVKQR 227
Query: 468 ----VVGLPYIRNFTF-------GMWFFAHLLMIYRSHGQLWTKYQNIILKKMKLWKVDT 322
++GL N F G F L+I + +W Y K +L+K+D
Sbjct: 228 EVVQMMGLSTHANQRFVFLIEVAGELLFVQQLVITKDVANVWKTY------KFRLFKIDA 281
Query: 321 NKGAIIPMNNLGKYALFMGLTSSLCLDISSLPDLKSNSIYILNYLGDCV----------- 175
KG + +LG A+F+G +S+ +D S L +K N IY Y CV
Sbjct: 282 IKGEAKEIKSLGDKAIFVGCNASIAIDSSKLVGVKPNHIY-FTYDWTCVFSEGDDSREIG 340
Query: 174 VYNMEDKXXXXXXXXXXXXPMRRVLVWFTPS 82
YN+ED+ + +W TPS
Sbjct: 341 AYNVEDETIQPLNQVISGVHLVSPAIWVTPS 371
>ref|XP_004958881.1| PREDICTED: F-box protein SKIP23-like [Setaria italica]
Length = 429
Score = 60.8 bits (146), Expect = 3e-07
Identities = 49/183 (26%), Positives = 79/183 (43%), Gaps = 33/183 (18%)
Frame = -1
Query: 636 AGDEKWTMIPRDLYYYANIAFHDGKLYAVLKSKENKKTIVAAYDLCVPNST------PTR 475
AGD+KWT +P Y + + DG LYA+ S E + A+DL T TR
Sbjct: 204 AGDDKWTWLPHGAGY-CDCVYMDGLLYALKSSGE-----IHAFDLTSSTVTMRVVIGSTR 257
Query: 474 VRVVGLPYIRNFTFGMWFFAHLLMIYRSHGQLW--------------------------- 376
+ + + YI +G LL ++R+ G+ +
Sbjct: 258 LGICDIMYIIQAPWG-----DLLQVWRTVGKPYMFTWHDDDPEGEDEDDDVIEEYEDEDD 312
Query: 375 TKYQNIILKKMKLWKVDTNKGAIIPMNNLGKYALFMGLTSSLCLDISSLPDLKSNSIYIL 196
T+ + ++K++KVD ++ +N+L + LF+G +SLCL P LKSN Y
Sbjct: 313 TEKWGVRTLRVKVYKVDVEAKGLVEINSLPNHVLFLGRNNSLCLSADGYPKLKSNHAYFT 372
Query: 195 NYL 187
+ L
Sbjct: 373 DDL 375
>gb|EMT15577.1| hypothetical protein F775_11437 [Aegilops tauschii]
Length = 436
Score = 59.7 bits (143), Expect = 7e-07
Identities = 46/150 (30%), Positives = 68/150 (45%), Gaps = 6/150 (4%)
Frame = -1
Query: 633 GDEKWTMIPRDLYYYANIAFHDGKLYAVLKSKENKKTIVAAYDLCVPNSTPT----RVRV 466
GD KWT +P + Y + DG LYA KS + A+DL PN T + +
Sbjct: 235 GDCKWTPLPPG-WDYEQCIYMDGLLYASTKSGR-----MDAFDLTSPNVTRNIIADEIDI 288
Query: 465 VGLPYIRNFTFGMWFFAHLLMIYRSHGQLWTKYQNIILK--KMKLWKVDTNKGAIIPMNN 292
Y F + LL + R + Y+ +I+K K+ L KV+ ++ +N+
Sbjct: 289 YSSEYKGVFYLLQAPWGDLLQVCRKAKLIDAGYEELIVKTNKVLLHKVNMEAEELVEINS 348
Query: 291 LGKYALFMGLTSSLCLDISSLPDLKSNSIY 202
L LF+G SLCL P LK+N +Y
Sbjct: 349 LHHNVLFLGRNQSLCLSAEEYPQLKANCVY 378
>ref|NP_001068159.1| Os11g0582700 [Oryza sativa Japonica Group]
gi|77551762|gb|ABA94559.1| F-box domain containing
protein, expressed [Oryza sativa Japonica Group]
gi|113645381|dbj|BAF28522.1| Os11g0582700 [Oryza sativa
Japonica Group]
Length = 492
Score = 59.3 bits (142), Expect = 9e-07
Identities = 45/154 (29%), Positives = 69/154 (44%), Gaps = 10/154 (6%)
Frame = -1
Query: 633 GDEKWTMIPRDLYYYANIAFHDGKLYAVLKSKENKKTIVAAYDLCVPNSTPTRVRVVGLP 454
GD+KWT P +Y ++ + DG LYA+ E + DL P T + + L
Sbjct: 291 GDDKWTWHPSHSHY-SDCIYIDGLLYALTAQGE-----IHTLDLSGPTITMKMI-IGSLS 343
Query: 453 YIRNFTFGMWFFAHLLMIYRSHGQLWTKYQNII----------LKKMKLWKVDTNKGAII 304
Y R W LL+++RS + Y+ + +++K++ VDT +
Sbjct: 344 YSRYIVQAPW--GGLLLVWRSVEDIEEDYEADLPADHATFVRYTREIKIYSVDTMGKKHV 401
Query: 303 PMNNLGKYALFMGLTSSLCLDISSLPDLKSNSIY 202
+NNL + LF+G SLCL P LK N Y
Sbjct: 402 EINNLDGHVLFLGHNQSLCLSTEQYPHLKENYTY 435
>gb|EEE52347.1| hypothetical protein OsJ_34387 [Oryza sativa Japonica Group]
Length = 410
Score = 59.3 bits (142), Expect = 9e-07
Identities = 45/154 (29%), Positives = 69/154 (44%), Gaps = 10/154 (6%)
Frame = -1
Query: 633 GDEKWTMIPRDLYYYANIAFHDGKLYAVLKSKENKKTIVAAYDLCVPNSTPTRVRVVGLP 454
GD+KWT P +Y ++ + DG LYA+ E + DL P T + + L
Sbjct: 209 GDDKWTWHPSHSHY-SDCIYIDGLLYALTAQGE-----IHTLDLSGPTITMKMI-IGSLS 261
Query: 453 YIRNFTFGMWFFAHLLMIYRSHGQLWTKYQNII----------LKKMKLWKVDTNKGAII 304
Y R W LL+++RS + Y+ + +++K++ VDT +
Sbjct: 262 YSRYIVQAPW--GGLLLVWRSVEDIEEDYEADLPADHATFVRYTREIKIYSVDTMGKKHV 319
Query: 303 PMNNLGKYALFMGLTSSLCLDISSLPDLKSNSIY 202
+NNL + LF+G SLCL P LK N Y
Sbjct: 320 EINNLDGHVLFLGHNQSLCLSTEQYPHLKENYTY 353
>gb|EEC76082.1| hypothetical protein OsI_13313 [Oryza sativa Indica Group]
Length = 273
Score = 58.5 bits (140), Expect = 2e-06
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Frame = -1
Query: 633 GDEKWTMIPRDLYYYANIAFHDGKLYAVLKSKENKKTIVAAYDLCVPNSTPTRVRVVGLP 454
GD+KWT +P +Y A+ + DG LYAV NK + A+DL P T + +
Sbjct: 62 GDDKWTWLPPHTHY-ADCIYKDGILYAV-----NKVGEIHAFDLSGPVVTMKTIIEMVPG 115
Query: 453 YIRNFTF---GMWFFAHLLMIYRSHGQLWTKYQN-----------IILKKMKLWKVDTNK 316
Y + + W LL ++RS+ + Y+ + ++K++ VDT +
Sbjct: 116 YACDKMYIVEAPW--GDLLQVWRSYEYIEGDYEADLHDADPAISVVNTGEIKIFSVDTVE 173
Query: 315 GAIIPMNNLGKYALFMGLTSSLCLDISSLPDLKSNSIY 202
+ + NL + LF+G SLCL + P+LK N Y
Sbjct: 174 KKRVEIKNLDGHVLFLGHNQSLCLSMEEYPNLKENYTY 211
>gb|EMT05686.1| hypothetical protein F775_10941 [Aegilops tauschii]
Length = 481
Score = 57.4 bits (137), Expect = 3e-06
Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 6/150 (4%)
Frame = -1
Query: 633 GDEKWTMIPRDLYYYANIAFHDGKLYAVLKSKENKKTIVAAYDLCVPNSTPT----RVRV 466
GD KWT++ D + Y + DG LYA ++ + A+D+ P +T + +
Sbjct: 280 GDCKWTLLTPD-WDYDQCIYMDGLLYASTRAGR-----MDAFDITGPTATRNIIADEIAI 333
Query: 465 VGLPYIRNFTFGMWFFAHLLMIYRSHGQLWTKYQNIILK--KMKLWKVDTNKGAIIPMNN 292
Y F + LL + R + Y+ +I+K K+ L KVD ++ +N+
Sbjct: 334 YSSEYRGEFYLLQAPWGDLLQVCRKAELIDVGYEELIVKTNKVLLHKVDMEAQELVEINS 393
Query: 291 LGKYALFMGLTSSLCLDISSLPDLKSNSIY 202
L LF+G S+CL P LK+N +Y
Sbjct: 394 LHHNVLFLGRNQSICLIAEEYPQLKANCVY 423
>dbj|BAJ99074.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326503790|dbj|BAK02681.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 466
Score = 56.2 bits (134), Expect = 8e-06
Identities = 44/171 (25%), Positives = 78/171 (45%), Gaps = 16/171 (9%)
Frame = -1
Query: 633 GDEKWTMIPRDLYYYANIAFHDGKLYAVLKSKENKKTIVAAYDLCVPNSTPTRVRVVGLP 454
GD+KWT +P+ Y++ I + DG LYAV + + A++L P T + +
Sbjct: 268 GDDKWTWLPQHSYFHDCI-YKDGLLYAVTSQGK-----ILAFNLRGPVVTTELI----MD 317
Query: 453 YIRNFTFGMWFFAH-----LLMIYRSH-----------GQLWTKYQNIILKKMKLWKVDT 322
++F + + A LL ++R+ T NI K++K DT
Sbjct: 318 ITKDFAYENIYIAQAPCGGLLQVWRTEEDSEYVEDADPATYLTNTTNI-----KIFKFDT 372
Query: 321 NKGAIIPMNNLGKYALFMGLTSSLCLDISSLPDLKSNSIYILNYLGDCVVY 169
++ +++L + L +G +LCL + P LK+N Y + DC++Y
Sbjct: 373 TSEKLVGIDSLDDHVLLLGRNQTLCLSVEEYPHLKANHAY---FTDDCLLY 420
>gb|EEE59824.1| hypothetical protein OsJ_12379 [Oryza sativa Japonica Group]
Length = 474
Score = 56.2 bits (134), Expect = 8e-06
Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 12/156 (7%)
Frame = -1
Query: 633 GDEKWTMIPRDLYYYANIAFHDGKLYAVLKSKENKKTIVAAYDLCVPNSTPTRVRVVGLP 454
GD+KWT +P +Y A+ + DG LYAV NK + A+DL P T + +
Sbjct: 62 GDDKWTWLPPHTHY-ADCIYKDGILYAV-----NKVGEIHAFDLSGPVVTMKTIIEMVPG 115
Query: 453 YIRNFTFGMWF-FAHLLMIYRSHGQLWTKYQNII-----------LKKMKLWKVDTNKGA 310
Y + + + + LL ++RS+ + Y+ + ++K++ VDT +
Sbjct: 116 YACDKMYIVQAPWGDLLQVWRSYEYIEGDYEADLHDADPAISVENTAEIKIFVVDTVEKK 175
Query: 309 IIPMNNLGKYALFMGLTSSLCLDISSLPDLKSNSIY 202
+ + NL + LF+G SLCL P LK N Y
Sbjct: 176 RVEIENLDGHVLFLGHNQSLCLSTEQYPHLKENYTY 211
>gb|EEC68427.1| hypothetical protein OsI_36609 [Oryza sativa Indica Group]
Length = 487
Score = 56.2 bits (134), Expect = 8e-06
Identities = 44/154 (28%), Positives = 68/154 (44%), Gaps = 10/154 (6%)
Frame = -1
Query: 633 GDEKWTMIPRDLYYYANIAFHDGKLYAVLKSKENKKTIVAAYDLCVPNSTPTRVRVVGLP 454
GD+KWT P +Y ++ + DG LYA+ E + DL P T + + L
Sbjct: 209 GDDKWTWHPSHSHY-SDCIYMDGLLYALTAQGE-----IHTLDLSGPTITMKTI-IGSLS 261
Query: 453 YIRNFTFGMWFFAHLLMIYRSHGQLWTKYQNII----------LKKMKLWKVDTNKGAII 304
Y R W LL+++RS + Y+ + +++K++ VDT +
Sbjct: 262 YSRYIVQAPW--GGLLLVWRSVEDIEEDYEADLPADHATFVRYTREIKIYSVDTMGKKHV 319
Query: 303 PMNNLGKYALFMGLTSSLCLDISSLPDLKSNSIY 202
+ NL + LF+G SLCL P LK N Y
Sbjct: 320 EIINLDGHVLFLGHNQSLCLSTEQYPHLKENYTY 353
>ref|NP_001051100.1| Os03g0720400 [Oryza sativa Japonica Group]
gi|50540689|gb|AAT77846.1| expressed protein [Oryza
sativa Japonica Group] gi|108710790|gb|ABF98585.1| F-box
domain containing protein, expressed [Oryza sativa
Japonica Group] gi|113549571|dbj|BAF13014.1|
Os03g0720400 [Oryza sativa Japonica Group]
gi|215695306|dbj|BAG90497.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 468
Score = 56.2 bits (134), Expect = 8e-06
Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 12/156 (7%)
Frame = -1
Query: 633 GDEKWTMIPRDLYYYANIAFHDGKLYAVLKSKENKKTIVAAYDLCVPNSTPTRVRVVGLP 454
GD+KWT +P +Y A+ + DG LYAV NK + A+DL P T + +
Sbjct: 262 GDDKWTWLPPHTHY-ADCIYKDGILYAV-----NKVGEIHAFDLSGPVVTMKTIIEMVPG 315
Query: 453 YIRNFTFGMWF-FAHLLMIYRSHGQLWTKYQNII-----------LKKMKLWKVDTNKGA 310
Y + + + + LL ++RS+ + Y+ + ++K++ VDT +
Sbjct: 316 YACDKMYIVQAPWGDLLQVWRSYEYIEGDYEADLHDADPAISVENTAEIKIFVVDTVEKK 375
Query: 309 IIPMNNLGKYALFMGLTSSLCLDISSLPDLKSNSIY 202
+ + NL + LF+G SLCL P LK N Y
Sbjct: 376 RVEIENLDGHVLFLGHNQSLCLSTEQYPHLKENYTY 411