BLASTX nr result
ID: Zingiber23_contig00047675
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00047675
(550 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMT10234.1| hypothetical protein F775_08466 [Aegilops tauschii] 68 1e-09
gb|EMS59964.1| hypothetical protein TRIUR3_14483 [Triticum urartu] 68 1e-09
gb|EEE56856.1| hypothetical protein OsJ_06476 [Oryza sativa Japo... 67 2e-09
ref|NP_001046686.1| Os02g0321000 [Oryza sativa Japonica Group] g... 67 2e-09
gb|EEE58590.1| hypothetical protein OsJ_09919 [Oryza sativa Japo... 65 8e-09
ref|NP_001049382.1| Os03g0216300 [Oryza sativa Japonica Group] g... 65 8e-09
ref|XP_006645982.1| PREDICTED: pentatricopeptide repeat-containi... 65 1e-08
gb|EEC74765.1| hypothetical protein OsI_10532 [Oryza sativa Indi... 65 1e-08
gb|EAY85607.1| hypothetical protein OsI_06979 [Oryza sativa Indi... 65 1e-08
ref|XP_004952366.1| PREDICTED: pentatricopeptide repeat-containi... 64 2e-08
ref|XP_004952365.1| PREDICTED: pentatricopeptide repeat-containi... 64 2e-08
gb|EAY74462.1| hypothetical protein OsI_02350 [Oryza sativa Indi... 64 2e-08
gb|EAZ12271.1| hypothetical protein OsJ_02159 [Oryza sativa Japo... 64 2e-08
gb|ACF86948.1| unknown [Zea mays] gi|414591270|tpg|DAA41841.1| T... 64 2e-08
ref|XP_002461275.1| hypothetical protein SORBIDRAFT_02g043930 [S... 64 3e-08
ref|XP_006665044.1| PREDICTED: pentatricopeptide repeat-containi... 63 4e-08
ref|XP_006852090.1| hypothetical protein AMTR_s00041p00236190 [A... 63 4e-08
ref|XP_006828151.1| hypothetical protein AMTR_s00023p00075180 [A... 63 4e-08
ref|XP_003566485.1| PREDICTED: pentatricopeptide repeat-containi... 63 5e-08
ref|XP_003561883.1| PREDICTED: pentatricopeptide repeat-containi... 63 5e-08
>gb|EMT10234.1| hypothetical protein F775_08466 [Aegilops tauschii]
Length = 548
Score = 68.2 bits (165), Expect = 1e-09
Identities = 35/91 (38%), Positives = 55/91 (60%), Gaps = 6/91 (6%)
Frame = -3
Query: 260 NLLMKAFSCAGNLHEVLRLFRDMKEAKCDP------DIFCYTTVLDALLAANRSEDAEKV 99
N+ MKA + AG + +VL LF +++ ++ P + CY T+++AL A R E+A
Sbjct: 59 NVAMKALARAGEVDQVLALFTELRASRTGPGGASPPSVLCYNTLVNALAEAGRVEEAHNA 118
Query: 98 FDEMIKSGVKLDAGPLTVLVKYYSFYLKRFD 6
FDEM+ +GV +A L +LVK +S+ RFD
Sbjct: 119 FDEMLATGVAPNASSLNILVKLHSWRSARFD 149
>gb|EMS59964.1| hypothetical protein TRIUR3_14483 [Triticum urartu]
Length = 458
Score = 68.2 bits (165), Expect = 1e-09
Identities = 45/135 (33%), Positives = 68/135 (50%)
Frame = -3
Query: 407 PVAVGGKETDHSSDIISRLSQILKFSPAQSRSSFPEPGARPLESDPFHYNLLMKAFSCAG 228
P G + + + L + P Q +P R LE D N+ MKA + AG
Sbjct: 13 PTCASGDDDSDDAKPLPPLPTSAERCPPQQHQQ--QPQWRQLERD---CNVAMKALARAG 67
Query: 227 NLHEVLRLFRDMKEAKCDPDIFCYTTVLDALLAANRSEDAEKVFDEMIKSGVKLDAGPLT 48
++ +VL LF +++ + P + CY T+L+AL+ A E+A KVFDEM SGV+ DA
Sbjct: 68 DVDQVLALFAELRTSGT-PSVLCYNTLLNALVEAGHVEEAPKVFDEMCASGVRPDASSHN 126
Query: 47 VLVKYYSFYLKRFDS 3
+ +K S+ DS
Sbjct: 127 IFLKLRSWTTDHDDS 141
>gb|EEE56856.1| hypothetical protein OsJ_06476 [Oryza sativa Japonica Group]
Length = 538
Score = 67.4 bits (163), Expect = 2e-09
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 7/95 (7%)
Frame = -3
Query: 290 RPLESDPFHYNLLMKAFSCAGNLHEVLRLFRDMKEAKCD-------PDIFCYTTVLDALL 132
R LE D YN+ MKA + AG+L EV+ +F ++K D P++ CY T+++AL
Sbjct: 49 RRLERD---YNVAMKALALAGDLDEVVAVFAELKRTAADGGDGGAPPNVLCYNTLVNALA 105
Query: 131 AANRSEDAEKVFDEMIKSGVKLDAGPLTVLVKYYS 27
A R +A K FDEM+ SGV +A +L+K ++
Sbjct: 106 EAGREGEALKAFDEMLASGVAPNASSQNILIKMHA 140
>ref|NP_001046686.1| Os02g0321000 [Oryza sativa Japonica Group]
gi|113536217|dbj|BAF08600.1| Os02g0321000 [Oryza sativa
Japonica Group]
Length = 542
Score = 67.4 bits (163), Expect = 2e-09
Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 7/95 (7%)
Frame = -3
Query: 290 RPLESDPFHYNLLMKAFSCAGNLHEVLRLFRDMKEAKCD-------PDIFCYTTVLDALL 132
R LE D YN+ MKA + AG+L EV+ +F ++K D P++ CY T+++AL
Sbjct: 53 RRLERD---YNVAMKALALAGDLDEVVAVFAELKRTAADGGDGGAPPNVLCYNTLVNALA 109
Query: 131 AANRSEDAEKVFDEMIKSGVKLDAGPLTVLVKYYS 27
A R +A K FDEM+ SGV +A +L+K ++
Sbjct: 110 EAGREGEALKAFDEMLASGVAPNASSQNILIKMHA 144
>gb|EEE58590.1| hypothetical protein OsJ_09919 [Oryza sativa Japonica Group]
Length = 465
Score = 65.5 bits (158), Expect = 8e-09
Identities = 44/123 (35%), Positives = 60/123 (48%)
Frame = -3
Query: 371 SDIISRLSQILKFSPAQSRSSFPEPGARPLESDPFHYNLLMKAFSCAGNLHEVLRLFRDM 192
S +S L+ + + S S P G+ P P YN LM A+S AG EVLRLFR +
Sbjct: 18 SSFLSALASLTASPSSSSSSPLPPAGSVPASPTPAAYNALMSAYSRAGRHGEVLRLFRSL 77
Query: 191 KEAKCDPDIFCYTTVLDALLAANRSEDAEKVFDEMIKSGVKLDAGPLTVLVKYYSFYLKR 12
A P +TT++ +L A+ R A F ++KSGV A T L++ S L
Sbjct: 78 PFAPTAP---LFTTLISSLAASGRPLAARAAFASLLKSGVPPTASAFTALLRSSSDALDF 134
Query: 11 FDS 3
DS
Sbjct: 135 VDS 137
>ref|NP_001049382.1| Os03g0216300 [Oryza sativa Japonica Group]
gi|108706849|gb|ABF94644.1| expressed protein [Oryza
sativa Japonica Group] gi|113547853|dbj|BAF11296.1|
Os03g0216300 [Oryza sativa Japonica Group]
gi|215734993|dbj|BAG95715.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 533
Score = 65.5 bits (158), Expect = 8e-09
Identities = 44/123 (35%), Positives = 60/123 (48%)
Frame = -3
Query: 371 SDIISRLSQILKFSPAQSRSSFPEPGARPLESDPFHYNLLMKAFSCAGNLHEVLRLFRDM 192
S +S L+ + + S S P G+ P P YN LM A+S AG EVLRLFR +
Sbjct: 18 SSFLSALASLTASPSSSSSSPLPPAGSVPASPTPAAYNALMSAYSRAGRHGEVLRLFRSL 77
Query: 191 KEAKCDPDIFCYTTVLDALLAANRSEDAEKVFDEMIKSGVKLDAGPLTVLVKYYSFYLKR 12
A P +TT++ +L A+ R A F ++KSGV A T L++ S L
Sbjct: 78 PFAPTAP---LFTTLISSLAASGRPLAARAAFASLLKSGVPPTASAFTALLRSSSDALDF 134
Query: 11 FDS 3
DS
Sbjct: 135 VDS 137
>ref|XP_006645982.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g40400-like [Oryza brachyantha]
Length = 396
Score = 65.1 bits (157), Expect = 1e-08
Identities = 34/84 (40%), Positives = 48/84 (57%)
Frame = -3
Query: 281 ESDPFHYNLLMKAFSCAGNLHEVLRLFRDMKEAKCDPDIFCYTTVLDALLAANRSEDAEK 102
E D YN L+ A+ G L + L LF M + PD+ +T V+DAL A R DA++
Sbjct: 42 EPDVVTYNTLLSAYCRRGRLQDALHLFDVMPYRRVHPDLVSHTVVMDALCKAGRLRDAQR 101
Query: 101 VFDEMIKSGVKLDAGPLTVLVKYY 30
+FD MI+SG+ DA +VL+ Y
Sbjct: 102 LFDRMIQSGLSPDAVAYSVLITGY 125
>gb|EEC74765.1| hypothetical protein OsI_10532 [Oryza sativa Indica Group]
Length = 533
Score = 65.1 bits (157), Expect = 1e-08
Identities = 44/123 (35%), Positives = 60/123 (48%)
Frame = -3
Query: 371 SDIISRLSQILKFSPAQSRSSFPEPGARPLESDPFHYNLLMKAFSCAGNLHEVLRLFRDM 192
S +S L+ + + S S P G+ P P YN LM A+S AG EVLRLFR +
Sbjct: 18 SSFLSALASLTASPSSSSSSPSPPAGSLPASPTPAAYNALMSAYSRAGRHGEVLRLFRSL 77
Query: 191 KEAKCDPDIFCYTTVLDALLAANRSEDAEKVFDEMIKSGVKLDAGPLTVLVKYYSFYLKR 12
A P +TT++ +L A+ R A F ++KSGV A T L++ S L
Sbjct: 78 PFAPTAP---LFTTLISSLAASGRPLAARAAFASLLKSGVPPTASAFTALLRSSSDALDF 134
Query: 11 FDS 3
DS
Sbjct: 135 VDS 137
>gb|EAY85607.1| hypothetical protein OsI_06979 [Oryza sativa Indica Group]
Length = 538
Score = 65.1 bits (157), Expect = 1e-08
Identities = 36/95 (37%), Positives = 56/95 (58%), Gaps = 7/95 (7%)
Frame = -3
Query: 290 RPLESDPFHYNLLMKAFSCAGNLHEVLRLFRDMKEAKCD-------PDIFCYTTVLDALL 132
R LE D YN+ MKA + AG++ EV+ +F ++K D P++ CY T+++AL
Sbjct: 49 RRLERD---YNVAMKALALAGDVDEVVAVFSELKWTAADGGDGGAPPNVLCYNTLVNALA 105
Query: 131 AANRSEDAEKVFDEMIKSGVKLDAGPLTVLVKYYS 27
A R +A K FDEM+ SGV +A +L+K ++
Sbjct: 106 EAGREGEALKAFDEMLASGVAPNASSQNILIKMHA 140
>ref|XP_004952366.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform X2 [Setaria italica]
Length = 590
Score = 64.3 bits (155), Expect = 2e-08
Identities = 31/88 (35%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Frame = -3
Query: 260 NLLMKAFSCAGNLHEVLRLFRDM----KEAKCDPDIFCYTTVLDALLAANRSEDAEKVFD 93
N+ MKA +C G++ +V+ LF ++ A P + CY T+L+AL+ R+ + KVFD
Sbjct: 125 NMAMKALACVGDVDQVVNLFAELMLSASSAGVVPSVLCYNTLLNALVEDGRAAETRKVFD 184
Query: 92 EMIKSGVKLDAGPLTVLVKYYSFYLKRF 9
EM+ +GV + +LVK Y++ F
Sbjct: 185 EMLATGVAPNVSSFNILVKLYAWRTVEF 212
>ref|XP_004952365.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform X1 [Setaria italica]
Length = 625
Score = 64.3 bits (155), Expect = 2e-08
Identities = 31/88 (35%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Frame = -3
Query: 260 NLLMKAFSCAGNLHEVLRLFRDM----KEAKCDPDIFCYTTVLDALLAANRSEDAEKVFD 93
N+ MKA +C G++ +V+ LF ++ A P + CY T+L+AL+ R+ + KVFD
Sbjct: 125 NMAMKALACVGDVDQVVNLFAELMLSASSAGVVPSVLCYNTLLNALVEDGRAAETRKVFD 184
Query: 92 EMIKSGVKLDAGPLTVLVKYYSFYLKRF 9
EM+ +GV + +LVK Y++ F
Sbjct: 185 EMLATGVAPNVSSFNILVKLYAWRTVEF 212
>gb|EAY74462.1| hypothetical protein OsI_02350 [Oryza sativa Indica Group]
Length = 596
Score = 64.3 bits (155), Expect = 2e-08
Identities = 41/129 (31%), Positives = 64/129 (49%), Gaps = 1/129 (0%)
Frame = -3
Query: 413 AVPVAVGGKETDHSSDIISRLSQILKFSPAQSRSSFPEP-GARPLESDPFHYNLLMKAFS 237
AV G + H+ +I+ ++ + + A+ F E + E D YN L+ +
Sbjct: 199 AVMARAGVRPNAHTFNIL--VAALCRGEDAERAQGFLEELEEQGFEPDGVTYNTLLSGYC 256
Query: 236 CAGNLHEVLRLFRDMKEAKCDPDIFCYTTVLDALLAANRSEDAEKVFDEMIKSGVKLDAG 57
G L + L LF M + PD+ +T V+DAL A R DA ++FD MI+SG+ DA
Sbjct: 257 RRGRLQDALHLFDVMPYRRVQPDLVSHTVVMDALCKAGRVRDARRMFDRMIQSGLSPDAV 316
Query: 56 PLTVLVKYY 30
+VL+ Y
Sbjct: 317 AYSVLIAGY 325
>gb|EAZ12271.1| hypothetical protein OsJ_02159 [Oryza sativa Japonica Group]
Length = 596
Score = 64.3 bits (155), Expect = 2e-08
Identities = 41/129 (31%), Positives = 64/129 (49%), Gaps = 1/129 (0%)
Frame = -3
Query: 413 AVPVAVGGKETDHSSDIISRLSQILKFSPAQSRSSFPEP-GARPLESDPFHYNLLMKAFS 237
AV G + H+ +I+ ++ + + A+ F E + E D YN L+ +
Sbjct: 199 AVMARAGVRPNAHTFNIL--VAALCRGEDAERAQGFLEELEEQGFEPDGVTYNTLLSGYC 256
Query: 236 CAGNLHEVLRLFRDMKEAKCDPDIFCYTTVLDALLAANRSEDAEKVFDEMIKSGVKLDAG 57
G L + L LF M + PD+ +T V+DAL A R DA ++FD MI+SG+ DA
Sbjct: 257 RRGRLQDALHLFDVMPYRRVQPDLVSHTVVMDALCKAGRVRDARRMFDRMIQSGLSPDAV 316
Query: 56 PLTVLVKYY 30
+VL+ Y
Sbjct: 317 AYSVLIAGY 325
>gb|ACF86948.1| unknown [Zea mays] gi|414591270|tpg|DAA41841.1| TPA: fertility
restorer [Zea mays]
Length = 563
Score = 63.9 bits (154), Expect = 2e-08
Identities = 44/144 (30%), Positives = 69/144 (47%), Gaps = 4/144 (2%)
Frame = -3
Query: 443 GHSTISDPVSAVPVAVGGKETDHSSDIISRLSQILKFSPAQSRSSFPEPGARPLESDPFH 264
G+S+ + AV A +D S D + + + S P P + LE
Sbjct: 2 GYSSAAAAAFAVLPAPSPSSSDDSDDANTLPTNPIVEPEVASPHQTPPPKLQQLERG--- 58
Query: 263 YNLLMKAFSCAGNLHEVLRLFRDM----KEAKCDPDIFCYTTVLDALLAANRSEDAEKVF 96
NL M AG++ +V+ LF D+ A P + CY T+L+AL+ A R+ +A VF
Sbjct: 59 CNLAMTPLGRAGDVDQVVHLFSDLMLSTSSAGVPPSVLCYNTLLNALVEAGRAVEARSVF 118
Query: 95 DEMIKSGVKLDAGPLTVLVKYYSF 24
D M+ +GV +A +LVK Y++
Sbjct: 119 DGMLAAGVAPNASSFNILVKLYAW 142
>ref|XP_002461275.1| hypothetical protein SORBIDRAFT_02g043930 [Sorghum bicolor]
gi|241924652|gb|EER97796.1| hypothetical protein
SORBIDRAFT_02g043930 [Sorghum bicolor]
Length = 334
Score = 63.5 bits (153), Expect = 3e-08
Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
Frame = -3
Query: 305 PEPGARPLESDPFHYNLLMKAFSCAGNLHEVLRLFRDMK----EAKCDPDIFCYTTVLDA 138
P P LE D NL MK + AG++ +V+ LF D+ A P + CY T+L+A
Sbjct: 49 PPPQLHQLERD---CNLAMKGLARAGDVDQVVHLFSDLMLSATSAGVPPSVLCYNTLLNA 105
Query: 137 LLAANRSEDAEKVFDEMIKSGVKLDAGPLTVLVKYYSFYLKRF 9
L R+ +A +VFD M+ +GV +A +LVK Y++ F
Sbjct: 106 LAEDGRAVEARRVFDGMLAAGVAPNASSFNILVKLYAWRTAEF 148
>ref|XP_006665044.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like, partial [Oryza brachyantha]
Length = 541
Score = 63.2 bits (152), Expect = 4e-08
Identities = 30/86 (34%), Positives = 54/86 (62%), Gaps = 7/86 (8%)
Frame = -3
Query: 263 YNLLMKAFSCAGNLHEVLRLFRDMKEAKCD-------PDIFCYTTVLDALLAANRSEDAE 105
YN+ MKA + +G++ EVL +F +++ + D P++ CY T+++AL A R+E+A
Sbjct: 58 YNVAMKALALSGDVDEVLAVFAELRRSLADAGDGGAAPNVLCYNTLVNALAEAGRTEEAL 117
Query: 104 KVFDEMIKSGVKLDAGPLTVLVKYYS 27
+ DEM+ SGV +A +L+K ++
Sbjct: 118 RALDEMLASGVAPNASSHNILIKMHA 143
>ref|XP_006852090.1| hypothetical protein AMTR_s00041p00236190 [Amborella trichopoda]
gi|548855673|gb|ERN13557.1| hypothetical protein
AMTR_s00041p00236190 [Amborella trichopoda]
Length = 308
Score = 63.2 bits (152), Expect = 4e-08
Identities = 32/83 (38%), Positives = 47/83 (56%)
Frame = -3
Query: 275 DPFHYNLLMKAFSCAGNLHEVLRLFRDMKEAKCDPDIFCYTTVLDALLAANRSEDAEKVF 96
D YN+L++ G + + ++LF +M+E K PD F Y +L L A R E+AE +
Sbjct: 147 DAITYNILIRGLCYEGRIEDAIKLFEEMRETKLGPDKFSYNAILRGLSRAGRKEEAENLL 206
Query: 95 DEMIKSGVKLDAGPLTVLVKYYS 27
+MI+SGV D TVL K +S
Sbjct: 207 RKMIESGVLPDQITYTVLGKSHS 229
>ref|XP_006828151.1| hypothetical protein AMTR_s00023p00075180 [Amborella trichopoda]
gi|548832798|gb|ERM95567.1| hypothetical protein
AMTR_s00023p00075180 [Amborella trichopoda]
Length = 557
Score = 63.2 bits (152), Expect = 4e-08
Identities = 32/83 (38%), Positives = 47/83 (56%)
Frame = -3
Query: 275 DPFHYNLLMKAFSCAGNLHEVLRLFRDMKEAKCDPDIFCYTTVLDALLAANRSEDAEKVF 96
D YN+L++ G + + ++LF +M+E K PD F Y +L L A R E+AE +F
Sbjct: 396 DAITYNILIRGLCYEGRIEDAIKLFEEMREKKLGPDKFSYNAILRGLSRAGRKEEAENLF 455
Query: 95 DEMIKSGVKLDAGPLTVLVKYYS 27
+MI+SGV D VL K +S
Sbjct: 456 RKMIESGVLPDQITYAVLGKSHS 478
>ref|XP_003566485.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like, partial [Brachypodium distachyon]
Length = 564
Score = 62.8 bits (151), Expect = 5e-08
Identities = 32/91 (35%), Positives = 54/91 (59%), Gaps = 6/91 (6%)
Frame = -3
Query: 260 NLLMKAFSCAGNLHEVLRLFRDMKEA------KCDPDIFCYTTVLDALLAANRSEDAEKV 99
N+ MKA + AG++ +VL LF +++ + P++ CY T++++L A R +A
Sbjct: 76 NVAMKALARAGDIDQVLALFAEIRTSGQGQGCTTPPNVLCYNTLVNSLAEAGRVAEAHDA 135
Query: 98 FDEMIKSGVKLDAGPLTVLVKYYSFYLKRFD 6
FDEM+ +GV + L +LVK +S+ RFD
Sbjct: 136 FDEMLAAGVAPNVSSLNILVKLHSWRSSRFD 166
>ref|XP_003561883.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62590-like [Brachypodium distachyon]
Length = 525
Score = 62.8 bits (151), Expect = 5e-08
Identities = 44/120 (36%), Positives = 58/120 (48%)
Frame = -3
Query: 389 KETDHSSDIISRLSQILKFSPAQSRSSFPEPGARPLESDPFHYNLLMKAFSCAGNLHEVL 210
+ H + S LS + F A S SS P G+ P P YN LM A+S AG EVL
Sbjct: 9 RRCSHDPKLSSFLSALASF--AASPSSSPAAGSVPAVPTPAAYNALMSAYSRAGRPDEVL 66
Query: 209 RLFRDMKEAKCDPDIFCYTTVLDALLAANRSEDAEKVFDEMIKSGVKLDAGPLTVLVKYY 30
RLFR + P +TT++ +L A+ R A F +I SG+ A T L+K Y
Sbjct: 67 RLFRFL---PFHPTARIFTTLISSLAASGRPMAARAAFSSLIVSGLTPTASAFTALLKSY 123