BLASTX nr result
ID: Zingiber23_contig00047653
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00047653
(396 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006661612.1| PREDICTED: uncharacterized ATP-dependent hel... 65 9e-09
ref|XP_004237888.1| PREDICTED: uncharacterized protein LOC101247... 64 2e-08
gb|AAL31652.1|AC079179_7 Putative DNA2-NAM7 helicase family prot... 63 4e-08
gb|EEC66485.1| hypothetical protein OsI_32578 [Oryza sativa Indi... 63 4e-08
ref|XP_006354012.1| PREDICTED: probable helicase senataxin-like ... 61 1e-07
ref|XP_006354010.1| PREDICTED: probable helicase senataxin-like ... 61 1e-07
gb|AFW87149.1| hypothetical protein ZEAMMB73_193864 [Zea mays] 58 1e-06
gb|AFW68962.1| hypothetical protein ZEAMMB73_667161 [Zea mays] 58 1e-06
ref|XP_002302283.2| hypothetical protein POPTR_0002s09410g [Popu... 56 4e-06
ref|XP_004983431.1| PREDICTED: probable helicase DDB_G0274399-li... 56 6e-06
ref|XP_004983429.1| PREDICTED: probable helicase DDB_G0274399-li... 56 6e-06
>ref|XP_006661612.1| PREDICTED: uncharacterized ATP-dependent helicase C29A10.10c-like
[Oryza brachyantha]
Length = 1355
Score = 65.1 bits (157), Expect = 9e-09
Identities = 48/133 (36%), Positives = 71/133 (53%), Gaps = 2/133 (1%)
Frame = +2
Query: 2 SDMDGNIDGIARISSNKQEILNGEIAEKQIVNEVNEPCAVKTDENSDNNSSFLGITTDKT 181
SD D D SNK+E + + +V+EP AVK+ + + + ++ T+
Sbjct: 128 SDADVASDTAGSSLSNKEESSGTATTQVKRDFQVSEPTAVKSGDMNKDEAAAEPSDTEMV 187
Query: 182 GEAIKDLKVDGPVSDNHGSLDCSSRVDVLSDGLEESSD--GKPKKVRGVEASHALRFANN 355
+A KD V GP L+ + ++ + + SD K K VRGVEA++ALRFA+N
Sbjct: 188 -DAPKDQVVRGPTG-----LESTKNLENKGNQPGDDSDPSNKSKDVRGVEANYALRFASN 241
Query: 356 LIKRPKVDEHKEA 394
KRPK+DEHKEA
Sbjct: 242 PAKRPKLDEHKEA 254
>ref|XP_004237888.1| PREDICTED: uncharacterized protein LOC101247908 [Solanum
lycopersicum]
Length = 1373
Score = 63.9 bits (154), Expect = 2e-08
Identities = 44/106 (41%), Positives = 60/106 (56%), Gaps = 10/106 (9%)
Frame = +2
Query: 107 EPCAVKTDENSDNNSSFLGITTD---KTGEA--IKDLKVDGPVSDNHGSL----DCSSRV 259
E AV++ NSD S + D + GE I L++D SD + + SS+
Sbjct: 161 EKSAVESVSNSDKVGSVDNASHDNEKRNGENYNISSLELDRDTSDRKSNSSRNSETSSKA 220
Query: 260 DVLSDGLEESSD-GKPKKVRGVEASHALRFANNLIKRPKVDEHKEA 394
D+ DG E+S K +++RGVEASHAL+ ANN KRPKVD+ KEA
Sbjct: 221 DIAMDGQEDSGQVPKHREIRGVEASHALKCANNFGKRPKVDQQKEA 266
>gb|AAL31652.1|AC079179_7 Putative DNA2-NAM7 helicase family protein [Oryza sativa]
gi|125573854|gb|EAZ15138.1| hypothetical protein
OsJ_30554 [Oryza sativa Japonica Group]
Length = 1468
Score = 63.2 bits (152), Expect = 4e-08
Identities = 46/133 (34%), Positives = 70/133 (52%), Gaps = 2/133 (1%)
Frame = +2
Query: 2 SDMDGNIDGIARISSNKQEILNGEIAEKQIVNEVNEPCAVKTDENSDNNSSFLGITTDKT 181
SD D D SNK+E+ + + ++ +EP AVK+ + ++ T+
Sbjct: 132 SDADVASDTAGSSVSNKEELAGTATTQVKRDSQESEPTAVKSGNMIKDEAAAEPSDTEMM 191
Query: 182 GEAIKDLKVDGPVSDNHGSLDCSSRVDVLSDGLEESSD--GKPKKVRGVEASHALRFANN 355
+ KD V GP L+ + ++ + L + SD K K VRGVEA++AL+FA+N
Sbjct: 192 -DVPKDPVVRGPTG-----LESTKNLENKGNQLGDDSDLSNKSKDVRGVEANYALKFASN 245
Query: 356 LIKRPKVDEHKEA 394
KRPK+DEHKEA
Sbjct: 246 PSKRPKLDEHKEA 258
>gb|EEC66485.1| hypothetical protein OsI_32578 [Oryza sativa Indica Group]
Length = 1360
Score = 63.2 bits (152), Expect = 4e-08
Identities = 46/133 (34%), Positives = 70/133 (52%), Gaps = 2/133 (1%)
Frame = +2
Query: 2 SDMDGNIDGIARISSNKQEILNGEIAEKQIVNEVNEPCAVKTDENSDNNSSFLGITTDKT 181
SD D D SNK+E+ + + ++ +EP AVK+ + ++ T+
Sbjct: 132 SDADVASDTAGSSVSNKEELAGTATTQVKRDSQESEPTAVKSGNMIKDEAAAEPSDTEMM 191
Query: 182 GEAIKDLKVDGPVSDNHGSLDCSSRVDVLSDGLEESSD--GKPKKVRGVEASHALRFANN 355
+ KD V GP L+ + ++ + L + SD K K VRGVEA++AL+FA+N
Sbjct: 192 -DVPKDPVVRGPTG-----LESTKNLENKGNQLGDDSDLSNKSKDVRGVEANYALKFASN 245
Query: 356 LIKRPKVDEHKEA 394
KRPK+DEHKEA
Sbjct: 246 PSKRPKLDEHKEA 258
>ref|XP_006354012.1| PREDICTED: probable helicase senataxin-like isoform X3 [Solanum
tuberosum]
Length = 1377
Score = 61.2 bits (147), Expect = 1e-07
Identities = 43/105 (40%), Positives = 57/105 (54%), Gaps = 10/105 (9%)
Frame = +2
Query: 107 EPCAVKTDENSDNNSSFLGITTDK---TGEA--IKDLKVDGPVSDNHGSL----DCSSRV 259
E AV+ NSD S + D GE I L++D SD + + SS+
Sbjct: 161 EKSAVEPVSNSDKVGSVDNASQDNEKGNGENYNISSLELDRDTSDRKSNSSRNSETSSKA 220
Query: 260 DVLSDGLEESSD-GKPKKVRGVEASHALRFANNLIKRPKVDEHKE 391
D+ DG E+S K +++RGVEASHAL+ ANN KRPKVD+ KE
Sbjct: 221 DITMDGQEDSGQVPKHREIRGVEASHALKCANNFGKRPKVDQQKE 265
>ref|XP_006354010.1| PREDICTED: probable helicase senataxin-like isoform X1 [Solanum
tuberosum] gi|565374963|ref|XP_006354011.1| PREDICTED:
probable helicase senataxin-like isoform X2 [Solanum
tuberosum]
Length = 1378
Score = 61.2 bits (147), Expect = 1e-07
Identities = 43/105 (40%), Positives = 57/105 (54%), Gaps = 10/105 (9%)
Frame = +2
Query: 107 EPCAVKTDENSDNNSSFLGITTDK---TGEA--IKDLKVDGPVSDNHGSL----DCSSRV 259
E AV+ NSD S + D GE I L++D SD + + SS+
Sbjct: 161 EKSAVEPVSNSDKVGSVDNASQDNEKGNGENYNISSLELDRDTSDRKSNSSRNSETSSKA 220
Query: 260 DVLSDGLEESSD-GKPKKVRGVEASHALRFANNLIKRPKVDEHKE 391
D+ DG E+S K +++RGVEASHAL+ ANN KRPKVD+ KE
Sbjct: 221 DITMDGQEDSGQVPKHREIRGVEASHALKCANNFGKRPKVDQQKE 265
>gb|AFW87149.1| hypothetical protein ZEAMMB73_193864 [Zea mays]
Length = 531
Score = 57.8 bits (138), Expect = 1e-06
Identities = 44/136 (32%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Frame = +2
Query: 2 SDMDGNIDGIARISSNKQEILNGEIAEKQIVNEVNEPCAVKTDENSDNNSSFLGITTDKT 181
SD DG + SSNK E + ++ +EP +K+ + +T D T
Sbjct: 165 SDADGISENAG--SSNKDEFTGTASTNLKKESQESEPHLIKSGD----------VTKDDT 212
Query: 182 GEAIKDL-KVDGPVSDNHGSLDCSSRVDVLSDGLEESSD----GKPKKVRGVEASHALRF 346
D KVD HGS + + G + D + + V+GVEA++ALRF
Sbjct: 213 AAECSDAEKVDASEDRVHGSTGSDNMQNSECKGNQPGDDLDLCNRSRDVKGVEANYALRF 272
Query: 347 ANNLIKRPKVDEHKEA 394
A+N KRPK++EHKEA
Sbjct: 273 ASNPAKRPKLNEHKEA 288
>gb|AFW68962.1| hypothetical protein ZEAMMB73_667161 [Zea mays]
Length = 1399
Score = 57.8 bits (138), Expect = 1e-06
Identities = 44/136 (32%), Positives = 64/136 (47%), Gaps = 5/136 (3%)
Frame = +2
Query: 2 SDMDGNIDGIARISSNKQEILNGEIAEKQIVNEVNEPCAVKTDENSDNNSSFLGITTDKT 181
SD DG + SSNK E + ++ +EP +K+ + +T D T
Sbjct: 165 SDADGISENAG--SSNKDEFTGTASTNLKKESQESEPHLIKSGD----------VTKDDT 212
Query: 182 GEAIKDL-KVDGPVSDNHGSLDCSSRVDVLSDGLEESSD----GKPKKVRGVEASHALRF 346
D KVD HGS + + G + D + + V+GVEA++ALRF
Sbjct: 213 AAECSDAEKVDASEDRVHGSTGSDNMQNSECKGNQPGDDLDLCNRSRDVKGVEANYALRF 272
Query: 347 ANNLIKRPKVDEHKEA 394
A+N KRPK++EHKEA
Sbjct: 273 ASNPAKRPKLNEHKEA 288
>ref|XP_002302283.2| hypothetical protein POPTR_0002s09410g [Populus trichocarpa]
gi|550344636|gb|EEE81556.2| hypothetical protein
POPTR_0002s09410g [Populus trichocarpa]
Length = 1381
Score = 56.2 bits (134), Expect = 4e-06
Identities = 49/142 (34%), Positives = 77/142 (54%), Gaps = 11/142 (7%)
Frame = +2
Query: 2 SDMDGNIDGIARISSNKQEILNGEIAEKQIVNEV----------NEPCAVKTDENSDNNS 151
SD +G+ D A S +Q G+ ++ Q+ +E+ N +VK +N++ S
Sbjct: 133 SDAEGSADACAGSSMCQQ----GKASQDQVKSELEGCTSGAVSMNVSSSVKVIDNANAES 188
Query: 152 SFLGITTDKTGEAIKDLKVDGPVSDNHGSLDCSSRVDVLSDGLEE-SSDGKPKKVRGVEA 328
S G + + D K S+N + + ++ DV +DG EE +S K +VRG+EA
Sbjct: 189 S--GHVSPGLDQGQNDHK-----SNNSRNSNDNANGDVSTDGQEEIASVSKQCEVRGMEA 241
Query: 329 SHALRFANNLIKRPKVDEHKEA 394
SHAL+ +NNL KR K+D+HKEA
Sbjct: 242 SHALKSSNNLGKR-KIDQHKEA 262
>ref|XP_004983431.1| PREDICTED: probable helicase DDB_G0274399-like isoform X3 [Setaria
italica]
Length = 1349
Score = 55.8 bits (133), Expect = 6e-06
Identities = 39/132 (29%), Positives = 71/132 (53%), Gaps = 1/132 (0%)
Frame = +2
Query: 2 SDMDGNIDGIARISSNKQEILNGEIAEKQIVNEVNEPCAVKTDENSDNNSSFLGITTDKT 181
SD DG + SNK E + + ++ +EP +K+ + + ++++ + +
Sbjct: 156 SDADGVSENAGSSVSNKDESVGTASTHVKKESQDSEPHLIKSGDVTKDDTA-AECSDAEM 214
Query: 182 GEAIKDLKVDGPV-SDNHGSLDCSSRVDVLSDGLEESSDGKPKKVRGVEASHALRFANNL 358
+A KD + G S++ +L+C G + + + K V+GVEA++AL+FA+N
Sbjct: 215 ADAPKDQVLRGSTGSESMQNLECKGN----QPGDDLDACNRSKDVKGVEANYALKFASNP 270
Query: 359 IKRPKVDEHKEA 394
KRPK++EHKEA
Sbjct: 271 AKRPKLNEHKEA 282
>ref|XP_004983429.1| PREDICTED: probable helicase DDB_G0274399-like isoform X1 [Setaria
italica] gi|514817415|ref|XP_004983430.1| PREDICTED:
probable helicase DDB_G0274399-like isoform X2 [Setaria
italica]
Length = 1394
Score = 55.8 bits (133), Expect = 6e-06
Identities = 39/132 (29%), Positives = 71/132 (53%), Gaps = 1/132 (0%)
Frame = +2
Query: 2 SDMDGNIDGIARISSNKQEILNGEIAEKQIVNEVNEPCAVKTDENSDNNSSFLGITTDKT 181
SD DG + SNK E + + ++ +EP +K+ + + ++++ + +
Sbjct: 156 SDADGVSENAGSSVSNKDESVGTASTHVKKESQDSEPHLIKSGDVTKDDTA-AECSDAEM 214
Query: 182 GEAIKDLKVDGPV-SDNHGSLDCSSRVDVLSDGLEESSDGKPKKVRGVEASHALRFANNL 358
+A KD + G S++ +L+C G + + + K V+GVEA++AL+FA+N
Sbjct: 215 ADAPKDQVLRGSTGSESMQNLECKGN----QPGDDLDACNRSKDVKGVEANYALKFASNP 270
Query: 359 IKRPKVDEHKEA 394
KRPK++EHKEA
Sbjct: 271 AKRPKLNEHKEA 282