BLASTX nr result

ID: Zingiber23_contig00047625 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00047625
         (388 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006850709.1| hypothetical protein AMTR_s00025p00023010 [A...    65   9e-09
ref|XP_006375953.1| hypothetical protein POPTR_0013s06730g [Popu...    62   1e-07
ref|XP_006375952.1| hypothetical protein POPTR_0013s06730g [Popu...    62   1e-07
gb|EOY11148.1| 5'-3' exoribonuclease 4 isoform 2 [Theobroma cacao]     58   1e-06
gb|EOY11147.1| Exoribonuclease 4 isoform 1 [Theobroma cacao]           58   1e-06
gb|ESW16799.1| hypothetical protein PHAVU_007G185300g [Phaseolus...    57   2e-06
ref|XP_003626390.1| 5'-3' exoribonuclease [Medicago truncatula] ...    56   6e-06
ref|XP_006826276.1| hypothetical protein AMTR_s00004p00046450 [A...    55   7e-06
gb|EPS72691.1| hypothetical protein M569_02065, partial [Genlise...    55   1e-05

>ref|XP_006850709.1| hypothetical protein AMTR_s00025p00023010 [Amborella trichopoda]
           gi|548854380|gb|ERN12290.1| hypothetical protein
           AMTR_s00025p00023010 [Amborella trichopoda]
          Length = 770

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 34/129 (26%), Positives = 62/129 (48%), Gaps = 1/129 (0%)
 Frame = +3

Query: 3   PSIQTHIARLPDGITLPNKSISKKHIPPVPGLWHETLISKRQAHLNRPIPHAIEGHLLLK 182
           P +  H+ RLP+G+ +P K ++K+ +     LWHE      +  L RP+P+++ G  L +
Sbjct: 299 PCVHAHVPRLPEGVIIPKKLVTKRDLTLARVLWHEDSALHGRVTLKRPVPNSVSGAYLGR 358

Query: 183 LAHKLVTNYYGEKMKQDSVRLDKK-AFDDKCNKKLKELTTTISILGKRKCRGQEHNQNTN 359
           LAH+LV  +Y  + ++     + K AF +      KE+ T         C  +   +  +
Sbjct: 359 LAHQLVKKFYKHQERESVTPANLKFAFSNVFGGLSKEMCTNGINNNNNTCGNKRTERECH 418

Query: 360 KRRHHKTKG 386
            +   + KG
Sbjct: 419 SKDETEAKG 427


>ref|XP_006375953.1| hypothetical protein POPTR_0013s06730g [Populus trichocarpa]
           gi|550325137|gb|ERP53750.1| hypothetical protein
           POPTR_0013s06730g [Populus trichocarpa]
          Length = 825

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 32/73 (43%), Positives = 43/73 (58%)
 Frame = +3

Query: 3   PSIQTHIARLPDGITLPNKSISKKHIPPVPGLWHETLISKRQAHLNRPIPHAIEGHLLLK 182
           P   +HI RLP+G+ LPNKS++K +I     LWHE  I    +   R IP +I G  L +
Sbjct: 331 PPFHSHIPRLPEGVILPNKSVTKCNILHAHHLWHEPAIPSISS--KRQIPKSISGPQLAE 388

Query: 183 LAHKLVTNYYGEK 221
           LAH+LV+ Y   K
Sbjct: 389 LAHRLVSEYSSSK 401


>ref|XP_006375952.1| hypothetical protein POPTR_0013s06730g [Populus trichocarpa]
           gi|550325136|gb|ERP53749.1| hypothetical protein
           POPTR_0013s06730g [Populus trichocarpa]
          Length = 788

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 32/73 (43%), Positives = 43/73 (58%)
 Frame = +3

Query: 3   PSIQTHIARLPDGITLPNKSISKKHIPPVPGLWHETLISKRQAHLNRPIPHAIEGHLLLK 182
           P   +HI RLP+G+ LPNKS++K +I     LWHE  I    +   R IP +I G  L +
Sbjct: 331 PPFHSHIPRLPEGVILPNKSVTKCNILHAHHLWHEPAIPSISS--KRQIPKSISGPQLAE 388

Query: 183 LAHKLVTNYYGEK 221
           LAH+LV+ Y   K
Sbjct: 389 LAHRLVSEYSSSK 401


>gb|EOY11148.1| 5'-3' exoribonuclease 4 isoform 2 [Theobroma cacao]
          Length = 869

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
 Frame = +3

Query: 3   PSIQTHIARLPDGITLPNKSISKKHIPPVPGLWHETLISKRQAHLNRP-IPHAIEGHLLL 179
           PS   HI  LP+G+ +P K ++   I P+P LWHE    +RQ   +RP +P AI G  L 
Sbjct: 585 PSCHKHIPELPEGVMIPKKVLTPLDIKPLPVLWHEDNGGRRQQGRDRPRVPGAIVGPQLG 644

Query: 180 KLAHKLVTN 206
           + AH+LV N
Sbjct: 645 EAAHRLVKN 653


>gb|EOY11147.1| Exoribonuclease 4 isoform 1 [Theobroma cacao]
          Length = 990

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
 Frame = +3

Query: 3   PSIQTHIARLPDGITLPNKSISKKHIPPVPGLWHETLISKRQAHLNRP-IPHAIEGHLLL 179
           PS   HI  LP+G+ +P K ++   I P+P LWHE    +RQ   +RP +P AI G  L 
Sbjct: 706 PSCHKHIPELPEGVMIPKKVLTPLDIKPLPVLWHEDNGGRRQQGRDRPRVPGAIVGPQLG 765

Query: 180 KLAHKLVTN 206
           + AH+LV N
Sbjct: 766 EAAHRLVKN 774


>gb|ESW16799.1| hypothetical protein PHAVU_007G185300g [Phaseolus vulgaris]
          Length = 932

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 29/69 (42%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
 Frame = +3

Query: 3   PSIQTHIARLPDGITLPNKSISKKHIPPVPGLWHETLISKRQAHLNRP-IPHAIEGHLLL 179
           P    HI +LPDG+ +PNK +    + P P LWHE  I +R     RP +P A  G  L 
Sbjct: 690 PQRHNHIPKLPDGVVIPNKVLKATDVKPFPVLWHEDNIGQRLQTRERPQVPGAKAGSQLG 749

Query: 180 KLAHKLVTN 206
           + AH+LV N
Sbjct: 750 EAAHRLVKN 758


>ref|XP_003626390.1| 5'-3' exoribonuclease [Medicago truncatula]
           gi|355501405|gb|AES82608.1| 5'-3' exoribonuclease
           [Medicago truncatula]
          Length = 956

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 27/68 (39%), Positives = 37/68 (54%)
 Frame = +3

Query: 3   PSIQTHIARLPDGITLPNKSISKKHIPPVPGLWHETLISKRQAHLNRPIPHAIEGHLLLK 182
           P    HI + PDG+ +P K +    I P+P LWHE    + QA   + +P AI G  L +
Sbjct: 695 PRTHRHIPKPPDGVVMPQKILRALDIKPLPVLWHEDNSRRHQARERQQVPGAIAGPQLGE 754

Query: 183 LAHKLVTN 206
            AH+LV N
Sbjct: 755 AAHRLVRN 762


>ref|XP_006826276.1| hypothetical protein AMTR_s00004p00046450 [Amborella trichopoda]
           gi|548830590|gb|ERM93513.1| hypothetical protein
           AMTR_s00004p00046450 [Amborella trichopoda]
          Length = 936

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 28/69 (40%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
 Frame = +3

Query: 3   PSIQTHIARLPDGITLPNKSISKKHIPPVPGLWHETLISKRQAHLNRP-IPHAIEGHLLL 179
           P    HI   P+G+ +P K ++ + I P P LWHE   S+RQ    RP +P AI G LL 
Sbjct: 698 PPPHKHIPEPPEGVRMPEKFLTPQDIKPFPVLWHEDNSSRRQQVRERPQVPRAISGPLLG 757

Query: 180 KLAHKLVTN 206
           +  H+L+ N
Sbjct: 758 EAVHRLLKN 766


>gb|EPS72691.1| hypothetical protein M569_02065, partial [Genlisea aurea]
          Length = 955

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 28/76 (36%), Positives = 40/76 (52%)
 Frame = +3

Query: 3   PSIQTHIARLPDGITLPNKSISKKHIPPVPGLWHETLISKRQAHLNRPIPHAIEGHLLLK 182
           P    HIA+LP+G+ +P K + +  I P P LWHE    + Q     P+  AI G  L +
Sbjct: 691 PDPHPHIAKLPEGVDVPKKILKRIDIKPTPALWHEDNGRRSQIFQRVPVSGAISGPSLGE 750

Query: 183 LAHKLVTNYYGEKMKQ 230
            AH+L+ N    K +Q
Sbjct: 751 AAHRLLHNTLNIKPEQ 766


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