BLASTX nr result
ID: Zingiber23_contig00047513
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00047513
(361 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containi... 62 1e-07
ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containi... 62 1e-07
ref|XP_006300029.1| hypothetical protein CARUB_v10016253mg [Caps... 52 2e-07
gb|EMJ14176.1| hypothetical protein PRUPE_ppa022473mg [Prunus pe... 60 2e-07
gb|EXB37002.1| hypothetical protein L484_018381 [Morus notabilis] 60 4e-07
emb|CBI25024.3| unnamed protein product [Vitis vinifera] 60 4e-07
ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containi... 60 4e-07
emb|CAN84062.1| hypothetical protein VITISV_010661 [Vitis vinifera] 59 9e-07
ref|XP_006828456.1| hypothetical protein AMTR_s00060p00130100 [A... 58 1e-06
ref|XP_002515791.1| pentatricopeptide repeat-containing protein,... 58 1e-06
ref|XP_006854251.1| hypothetical protein AMTR_s00039p00023570 [A... 58 1e-06
emb|CBI15852.3| unnamed protein product [Vitis vinifera] 58 1e-06
gb|ACN34921.1| unknown [Zea mays] gi|414879789|tpg|DAA56920.1| T... 58 1e-06
ref|NP_001151797.1| tetratricopeptide-like helical [Zea mays] gi... 58 1e-06
ref|XP_004497133.1| PREDICTED: pentatricopeptide repeat-containi... 57 2e-06
gb|EMJ04473.1| hypothetical protein PRUPE_ppa025467mg [Prunus pe... 57 2e-06
ref|XP_004139361.1| PREDICTED: putative pentatricopeptide repeat... 57 2e-06
ref|XP_002274656.2| PREDICTED: pentatricopeptide repeat-containi... 57 2e-06
ref|XP_002974402.1| hypothetical protein SELMODRAFT_101549 [Sela... 57 2e-06
emb|CBI32673.3| unnamed protein product [Vitis vinifera] 57 2e-06
>ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 61.6 bits (148), Expect = 1e-07
Identities = 29/51 (56%), Positives = 39/51 (76%)
Frame = -1
Query: 154 ID*SEKVFDRMPQRSMVTWNTMIAAHSQQGEGTEALNVFLQMRREGTLPSE 2
+D + +VFD MP RS+V+WNTMI + +Q GE EAL++ LQM+REGT SE
Sbjct: 115 VDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSE 165
>ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cucumis sativus]
Length = 638
Score = 61.6 bits (148), Expect = 1e-07
Identities = 29/51 (56%), Positives = 39/51 (76%)
Frame = -1
Query: 154 ID*SEKVFDRMPQRSMVTWNTMIAAHSQQGEGTEALNVFLQMRREGTLPSE 2
+D + +VFD MP RS+V+WNTMI + +Q GE EAL++ LQM+REGT SE
Sbjct: 115 VDFARQVFDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSE 165
>ref|XP_006300029.1| hypothetical protein CARUB_v10016253mg [Capsella rubella]
gi|482568738|gb|EOA32927.1| hypothetical protein
CARUB_v10016253mg [Capsella rubella]
Length = 564
Score = 52.4 bits (124), Expect(2) = 2e-07
Identities = 20/45 (44%), Positives = 34/45 (75%)
Frame = -1
Query: 136 VFDRMPQRSMVTWNTMIAAHSQQGEGTEALNVFLQMRREGTLPSE 2
+FD MP+R++V+WNT+I +SQ G+ EA+++FL++R G P +
Sbjct: 273 LFDGMPERNLVSWNTIITGYSQNGDAEEAMHMFLELRSAGFAPDK 317
Score = 28.5 bits (62), Expect(2) = 2e-07
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -3
Query: 287 FHGFLPKTGFLPEISSKGLG 228
FHGFL + GF P SKG+G
Sbjct: 229 FHGFLKELGFDPCCQSKGIG 248
>gb|EMJ14176.1| hypothetical protein PRUPE_ppa022473mg [Prunus persica]
Length = 589
Score = 60.5 bits (145), Expect = 2e-07
Identities = 29/51 (56%), Positives = 38/51 (74%)
Frame = -1
Query: 154 ID*SEKVFDRMPQRSMVTWNTMIAAHSQQGEGTEALNVFLQMRREGTLPSE 2
+D + KVFD MP+RS+V+WNTMI + +Q GE +AL +FLQMRRE SE
Sbjct: 66 VDCAGKVFDEMPERSLVSWNTMIGSLTQSGEEEKALGLFLQMRREANHFSE 116
>gb|EXB37002.1| hypothetical protein L484_018381 [Morus notabilis]
Length = 623
Score = 59.7 bits (143), Expect = 4e-07
Identities = 27/48 (56%), Positives = 37/48 (77%)
Frame = -1
Query: 145 SEKVFDRMPQRSMVTWNTMIAAHSQQGEGTEALNVFLQMRREGTLPSE 2
+ KVFD MP+RS+V+WNTMI + ++ GE EAL +FL+M+REG SE
Sbjct: 103 ARKVFDEMPERSLVSWNTMIGSLTRDGEEREALGLFLEMQREGNSLSE 150
>emb|CBI25024.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 59.7 bits (143), Expect = 4e-07
Identities = 25/51 (49%), Positives = 40/51 (78%)
Frame = -1
Query: 154 ID*SEKVFDRMPQRSMVTWNTMIAAHSQQGEGTEALNVFLQMRREGTLPSE 2
++ + K+FD MP RS+V+WNTM+ +H+Q G+ +AL +F+QM++EGT SE
Sbjct: 98 VESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSE 148
>ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Vitis vinifera]
Length = 594
Score = 59.7 bits (143), Expect = 4e-07
Identities = 25/51 (49%), Positives = 40/51 (78%)
Frame = -1
Query: 154 ID*SEKVFDRMPQRSMVTWNTMIAAHSQQGEGTEALNVFLQMRREGTLPSE 2
++ + K+FD MP RS+V+WNTM+ +H+Q G+ +AL +F+QM++EGT SE
Sbjct: 71 VESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSE 121
>emb|CAN84062.1| hypothetical protein VITISV_010661 [Vitis vinifera]
Length = 641
Score = 58.5 bits (140), Expect = 9e-07
Identities = 24/51 (47%), Positives = 39/51 (76%)
Frame = -1
Query: 154 ID*SEKVFDRMPQRSMVTWNTMIAAHSQQGEGTEALNVFLQMRREGTLPSE 2
++ + K+FD MP RS+V+WNTM+ +H+Q G+ +AL +F+QM++EG SE
Sbjct: 98 VESARKLFDEMPVRSLVSWNTMVGSHTQNGDSEKALVLFMQMQKEGISCSE 148
>ref|XP_006828456.1| hypothetical protein AMTR_s00060p00130100 [Amborella trichopoda]
gi|548833204|gb|ERM95872.1| hypothetical protein
AMTR_s00060p00130100 [Amborella trichopoda]
Length = 745
Score = 58.2 bits (139), Expect = 1e-06
Identities = 25/59 (42%), Positives = 40/59 (67%)
Frame = -1
Query: 178 DSFKYAQGID*SEKVFDRMPQRSMVTWNTMIAAHSQQGEGTEALNVFLQMRREGTLPSE 2
D + ++ + +VFDRM QR++V+WN +I Q G+G EALN++ QM++ GT+P E
Sbjct: 439 DMYSKCGSLEEARRVFDRMGQRNVVSWNAIIVGFVQVGQGEEALNLYHQMKQTGTVPDE 497
>ref|XP_002515791.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223545119|gb|EEF46630.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 352
Score = 58.2 bits (139), Expect = 1e-06
Identities = 28/51 (54%), Positives = 38/51 (74%)
Frame = -1
Query: 154 ID*SEKVFDRMPQRSMVTWNTMIAAHSQQGEGTEALNVFLQMRREGTLPSE 2
ID + KVFD+M RS+V+WNTMI ++Q GE +AL +FL+M+REG SE
Sbjct: 36 IDCARKVFDKMLGRSLVSWNTMIGTYTQNGEEQKALGLFLEMQREGNPFSE 86
>ref|XP_006854251.1| hypothetical protein AMTR_s00039p00023570 [Amborella trichopoda]
gi|548857927|gb|ERN15718.1| hypothetical protein
AMTR_s00039p00023570 [Amborella trichopoda]
Length = 698
Score = 57.8 bits (138), Expect = 1e-06
Identities = 27/47 (57%), Positives = 34/47 (72%)
Frame = -1
Query: 154 ID*SEKVFDRMPQRSMVTWNTMIAAHSQQGEGTEALNVFLQMRREGT 14
ID +EKVFD M +R +V+WN MI+ Q G GTEAL VF+ M+RE T
Sbjct: 92 IDIAEKVFDNMGERDLVSWNAMISGFCQNGFGTEALGVFVSMKREKT 138
>emb|CBI15852.3| unnamed protein product [Vitis vinifera]
Length = 595
Score = 57.8 bits (138), Expect = 1e-06
Identities = 24/59 (40%), Positives = 43/59 (72%)
Frame = -1
Query: 178 DSFKYAQGID*SEKVFDRMPQRSMVTWNTMIAAHSQQGEGTEALNVFLQMRREGTLPSE 2
D++ Q ++ + KVFDRM +R MV+W T+++A+ Q + +EAL++F QMR +G +P++
Sbjct: 426 DAYFKCQSLEDARKVFDRMQERDMVSWTTLVSAYVQCYQPSEALSIFSQMREQGFMPNQ 484
>gb|ACN34921.1| unknown [Zea mays] gi|414879789|tpg|DAA56920.1| TPA:
tetratricopeptide-like helical [Zea mays]
Length = 460
Score = 57.8 bits (138), Expect = 1e-06
Identities = 25/50 (50%), Positives = 38/50 (76%)
Frame = -1
Query: 151 D*SEKVFDRMPQRSMVTWNTMIAAHSQQGEGTEALNVFLQMRREGTLPSE 2
D ++++F RMP+R++V+WN MI +SQ G G EA+N+FL+M R G P+E
Sbjct: 126 DEADRLFRRMPERNVVSWNAMIGGYSQAGLGEEAVNLFLEMCRGGVSPNE 175
>ref|NP_001151797.1| tetratricopeptide-like helical [Zea mays]
gi|195649749|gb|ACG44342.1| tetratricopeptide-like
helical [Zea mays]
Length = 460
Score = 57.8 bits (138), Expect = 1e-06
Identities = 25/50 (50%), Positives = 38/50 (76%)
Frame = -1
Query: 151 D*SEKVFDRMPQRSMVTWNTMIAAHSQQGEGTEALNVFLQMRREGTLPSE 2
D ++++F RMP+R++V+WN MI +SQ G G EA+N+FL+M R G P+E
Sbjct: 126 DEADRLFRRMPERNVVSWNAMIGGYSQAGLGEEAVNLFLEMCRGGVSPNE 175
>ref|XP_004497133.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g04780-like [Cicer arietinum]
Length = 628
Score = 57.4 bits (137), Expect = 2e-06
Identities = 28/48 (58%), Positives = 36/48 (75%)
Frame = -1
Query: 145 SEKVFDRMPQRSMVTWNTMIAAHSQQGEGTEALNVFLQMRREGTLPSE 2
+ KVFD MP +S+V+WNTMI A +Q E EAL +F+QM REGTL +E
Sbjct: 107 ARKVFDEMPVKSLVSWNTMIGALTQISEEKEALMLFIQMLREGTLFNE 154
>gb|EMJ04473.1| hypothetical protein PRUPE_ppa025467mg [Prunus persica]
Length = 575
Score = 57.4 bits (137), Expect = 2e-06
Identities = 25/48 (52%), Positives = 38/48 (79%)
Frame = -1
Query: 145 SEKVFDRMPQRSMVTWNTMIAAHSQQGEGTEALNVFLQMRREGTLPSE 2
+++V D MP R++V+W MI+A+S++G +EALN+FLQM R GT P+E
Sbjct: 64 AQRVLDEMPVRNVVSWTAMISAYSKRGCASEALNLFLQMLRSGTEPNE 111
>ref|XP_004139361.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g05240-like [Cucumis sativus]
gi|449525900|ref|XP_004169954.1| PREDICTED: putative
pentatricopeptide repeat-containing protein
At3g05240-like [Cucumis sativus]
Length = 562
Score = 57.4 bits (137), Expect = 2e-06
Identities = 23/48 (47%), Positives = 36/48 (75%)
Frame = -1
Query: 145 SEKVFDRMPQRSMVTWNTMIAAHSQQGEGTEALNVFLQMRREGTLPSE 2
+ +FD+MPQR++V WN+MI+A+SQ G G EAL +F+ M G +P++
Sbjct: 267 ARNLFDKMPQRNLVVWNSMISAYSQYGRGAEALRLFVDMEMAGFVPNK 314
>ref|XP_002274656.2| PREDICTED: pentatricopeptide repeat-containing protein At5g42450,
mitochondrial-like [Vitis vinifera]
Length = 538
Score = 57.4 bits (137), Expect = 2e-06
Identities = 24/45 (53%), Positives = 36/45 (80%)
Frame = -1
Query: 136 VFDRMPQRSMVTWNTMIAAHSQQGEGTEALNVFLQMRREGTLPSE 2
+F +MP+R++V+WN MI+ +SQ G EA+N+F+ M REGTLP+E
Sbjct: 199 LFRKMPERNVVSWNAMISGYSQMGYNEEAVNLFVVMLREGTLPNE 243
>ref|XP_002974402.1| hypothetical protein SELMODRAFT_101549 [Selaginella moellendorffii]
gi|300158000|gb|EFJ24624.1| hypothetical protein
SELMODRAFT_101549 [Selaginella moellendorffii]
Length = 453
Score = 57.4 bits (137), Expect = 2e-06
Identities = 25/45 (55%), Positives = 34/45 (75%)
Frame = -1
Query: 136 VFDRMPQRSMVTWNTMIAAHSQQGEGTEALNVFLQMRREGTLPSE 2
VFD+MPQR++VTWN+M+AA++Q G EAL +F M EG P+E
Sbjct: 218 VFDKMPQRNLVTWNSMVAAYAQLGNPAEALELFKSMDLEGITPNE 262
>emb|CBI32673.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 57.4 bits (137), Expect = 2e-06
Identities = 24/45 (53%), Positives = 36/45 (80%)
Frame = -1
Query: 136 VFDRMPQRSMVTWNTMIAAHSQQGEGTEALNVFLQMRREGTLPSE 2
+F +MP+R++V+WN MI+ +SQ G EA+N+F+ M REGTLP+E
Sbjct: 480 LFRKMPERNVVSWNAMISGYSQMGYNEEAVNLFVVMLREGTLPNE 524