BLASTX nr result

ID: Zingiber23_contig00046424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00046424
         (316 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004250454.1| PREDICTED: pentatricopeptide repeat-containi...    55   1e-05

>ref|XP_004250454.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Solanum lycopersicum]
          Length = 828

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 34/87 (39%), Positives = 48/87 (55%)
 Frame = -1

Query: 313 ISSCMLTAVESLFQRSLPSLSPTRQAHAGLLKCGLVPGDARHTSKLLAFYAGHRCVADVE 134
           + S M   + SL  RS  SLS T+Q HA +LK G    D   T+K+L+ YA   C A+ E
Sbjct: 81  LDSLMPNTILSLIARS-SSLSQTQQVHAHILKTGH-SSDTHFTNKVLSLYANFNCFANAE 138

Query: 133 FLSRSVTRPDPFAFSGVISVLVRSHLF 53
            L  S+  P+ F+F  +I    +S+LF
Sbjct: 139 SLLHSLPNPNIFSFKSLIHASSKSNLF 165


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