BLASTX nr result
ID: Zingiber23_contig00046238
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00046238
(213 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002304774.1| pentatricopeptide repeat-containing family p... 97 2e-18
gb|EXC10461.1| hypothetical protein L484_008628 [Morus notabilis] 94 1e-17
gb|EOY17580.1| Pentatricopeptide repeat (PPR-like) superfamily p... 94 1e-17
ref|XP_004140286.1| PREDICTED: pentatricopeptide repeat-containi... 92 7e-17
ref|XP_003598903.1| Pentatricopeptide repeat-containing protein ... 91 1e-16
ref|XP_002513116.1| pentatricopeptide repeat-containing protein,... 91 1e-16
ref|XP_002269066.2| PREDICTED: pentatricopeptide repeat-containi... 91 2e-16
emb|CBI17752.3| unnamed protein product [Vitis vinifera] 91 2e-16
ref|XP_006283187.1| hypothetical protein CARUB_v10004218mg, part... 90 4e-16
gb|EMJ21933.1| hypothetical protein PRUPE_ppa023145mg [Prunus pe... 89 5e-16
ref|XP_006345374.1| PREDICTED: pentatricopeptide repeat-containi... 89 6e-16
ref|XP_004229293.1| PREDICTED: pentatricopeptide repeat-containi... 89 6e-16
ref|XP_006482966.1| PREDICTED: pentatricopeptide repeat-containi... 89 8e-16
ref|XP_006438906.1| hypothetical protein CICLE_v10030824mg [Citr... 89 8e-16
ref|NP_193806.1| pentatricopeptide repeat-containing protein [Ar... 88 1e-15
ref|XP_006605814.1| PREDICTED: pentatricopeptide repeat-containi... 88 1e-15
ref|XP_004494981.1| PREDICTED: pentatricopeptide repeat-containi... 88 1e-15
ref|XP_002869928.1| pentatricopeptide repeat-containing protein ... 87 2e-15
ref|XP_006413862.1| hypothetical protein EUTSA_v10024515mg [Eutr... 87 2e-15
ref|XP_004305399.1| PREDICTED: pentatricopeptide repeat-containi... 86 5e-15
>ref|XP_002304774.1| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|222842206|gb|EEE79753.1|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 728
Score = 97.1 bits (240), Expect = 2e-18
Identities = 45/70 (64%), Positives = 52/70 (74%)
Frame = -2
Query: 212 DPSLFTRFFHWAGKQKGFHHTFASYNAFXXXXXXXXXXXXADQLPELMHAQGKQPSEKQL 33
+P L T+FFHWAGKQKGF HTFASYNAF ADQLPELM AQGK P+EKQ
Sbjct: 139 NPQLATKFFHWAGKQKGFKHTFASYNAFAYNLNRSNFFRAADQLPELMEAQGKPPTEKQF 198
Query: 32 EVLVRMHADS 3
E+L+RMH+D+
Sbjct: 199 EILIRMHSDA 208
>gb|EXC10461.1| hypothetical protein L484_008628 [Morus notabilis]
Length = 716
Score = 94.4 bits (233), Expect = 1e-17
Identities = 43/70 (61%), Positives = 51/70 (72%)
Frame = -2
Query: 212 DPSLFTRFFHWAGKQKGFHHTFASYNAFXXXXXXXXXXXXADQLPELMHAQGKQPSEKQL 33
DPSL ++FFHWAGKQKG+ H FASYNAF ADQ+P LM AQGK PSEKQ
Sbjct: 126 DPSLASKFFHWAGKQKGYRHNFASYNAFAYCLNRGDRYRSADQVPHLMEAQGKPPSEKQF 185
Query: 32 EVLVRMHADS 3
E+L+RMH+D+
Sbjct: 186 EILIRMHSDA 195
>gb|EOY17580.1| Pentatricopeptide repeat (PPR-like) superfamily protein [Theobroma
cacao]
Length = 716
Score = 94.4 bits (233), Expect = 1e-17
Identities = 44/70 (62%), Positives = 51/70 (72%)
Frame = -2
Query: 212 DPSLFTRFFHWAGKQKGFHHTFASYNAFXXXXXXXXXXXXADQLPELMHAQGKQPSEKQL 33
DP L ++FFHWAGKQKGF H FASYNA ADQLPELM +QGKQP+EKQ
Sbjct: 127 DPVLASKFFHWAGKQKGFKHNFASYNALAYCLNRNGRFRAADQLPELMDSQGKQPTEKQF 186
Query: 32 EVLVRMHADS 3
E+L+RMHAD+
Sbjct: 187 EILIRMHADN 196
>ref|XP_004140286.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20740-like [Cucumis sativus]
gi|449531474|ref|XP_004172711.1| PREDICTED:
pentatricopeptide repeat-containing protein
At4g20740-like [Cucumis sativus]
Length = 726
Score = 92.0 bits (227), Expect = 7e-17
Identities = 42/67 (62%), Positives = 50/67 (74%)
Frame = -2
Query: 203 LFTRFFHWAGKQKGFHHTFASYNAFXXXXXXXXXXXXADQLPELMHAQGKQPSEKQLEVL 24
L ++FF+WAGKQKGFHHTFASYNAF ADQ+PELM +QGK PSEKQ E+L
Sbjct: 139 LASKFFYWAGKQKGFHHTFASYNAFAYCLNRHNRFRAADQIPELMDSQGKPPSEKQFEIL 198
Query: 23 VRMHADS 3
+RMH D+
Sbjct: 199 IRMHCDA 205
>ref|XP_003598903.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355487951|gb|AES69154.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 767
Score = 91.3 bits (225), Expect = 1e-16
Identities = 42/70 (60%), Positives = 50/70 (71%)
Frame = -2
Query: 212 DPSLFTRFFHWAGKQKGFHHTFASYNAFXXXXXXXXXXXXADQLPELMHAQGKQPSEKQL 33
+P+L +FFHW KQKG+HH FASYNAF ADQLPELM AQGK PSEKQ
Sbjct: 133 NPTLAFKFFHWVEKQKGYHHNFASYNAFTYCLNRANHFRAADQLPELMDAQGKPPSEKQF 192
Query: 32 EVLVRMHADS 3
E+L+RMH+D+
Sbjct: 193 EILIRMHSDA 202
>ref|XP_002513116.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223548127|gb|EEF49619.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 1128
Score = 91.3 bits (225), Expect = 1e-16
Identities = 41/70 (58%), Positives = 51/70 (72%)
Frame = -2
Query: 212 DPSLFTRFFHWAGKQKGFHHTFASYNAFXXXXXXXXXXXXADQLPELMHAQGKQPSEKQL 33
DP L ++FFHWAGKQKG+ H FASYNA+ ADQLPELM +QGK P+EKQ
Sbjct: 573 DPHLASQFFHWAGKQKGYRHNFASYNAYAYCLNRSSFFRAADQLPELMDSQGKPPTEKQF 632
Query: 32 EVLVRMHADS 3
E+L+RMH+D+
Sbjct: 633 EILIRMHSDA 642
>ref|XP_002269066.2| PREDICTED: pentatricopeptide repeat-containing protein
At4g20740-like [Vitis vinifera]
Length = 1294
Score = 90.5 bits (223), Expect = 2e-16
Identities = 41/70 (58%), Positives = 50/70 (71%)
Frame = -2
Query: 212 DPSLFTRFFHWAGKQKGFHHTFASYNAFXXXXXXXXXXXXADQLPELMHAQGKQPSEKQL 33
DP + ++FFHWAGKQKG+ H FASYNAF ADQ+PELM+ QGK PSEKQ
Sbjct: 670 DPVICSKFFHWAGKQKGYKHNFASYNAFAYCLNRSNQFRAADQVPELMNMQGKPPSEKQF 729
Query: 32 EVLVRMHADS 3
E+L+RMH D+
Sbjct: 730 EILIRMHIDA 739
>emb|CBI17752.3| unnamed protein product [Vitis vinifera]
Length = 729
Score = 90.5 bits (223), Expect = 2e-16
Identities = 41/70 (58%), Positives = 50/70 (71%)
Frame = -2
Query: 212 DPSLFTRFFHWAGKQKGFHHTFASYNAFXXXXXXXXXXXXADQLPELMHAQGKQPSEKQL 33
DP + ++FFHWAGKQKG+ H FASYNAF ADQ+PELM+ QGK PSEKQ
Sbjct: 131 DPVICSKFFHWAGKQKGYKHNFASYNAFAYCLNRSNQFRAADQVPELMNMQGKPPSEKQF 190
Query: 32 EVLVRMHADS 3
E+L+RMH D+
Sbjct: 191 EILIRMHIDA 200
>ref|XP_006283187.1| hypothetical protein CARUB_v10004218mg, partial [Capsella rubella]
gi|482551892|gb|EOA16085.1| hypothetical protein
CARUB_v10004218mg, partial [Capsella rubella]
Length = 745
Score = 89.7 bits (221), Expect = 4e-16
Identities = 41/70 (58%), Positives = 50/70 (71%)
Frame = -2
Query: 212 DPSLFTRFFHWAGKQKGFHHTFASYNAFXXXXXXXXXXXXADQLPELMHAQGKQPSEKQL 33
D ++ +FFHWAGKQKG+ H FASYNAF ADQLPELM +QG+ PSEKQ
Sbjct: 155 DAAVAAKFFHWAGKQKGYRHDFASYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQF 214
Query: 32 EVLVRMHADS 3
E+L+RMHAD+
Sbjct: 215 EILIRMHADN 224
>gb|EMJ21933.1| hypothetical protein PRUPE_ppa023145mg [Prunus persica]
Length = 721
Score = 89.4 bits (220), Expect = 5e-16
Identities = 41/70 (58%), Positives = 50/70 (71%)
Frame = -2
Query: 212 DPSLFTRFFHWAGKQKGFHHTFASYNAFXXXXXXXXXXXXADQLPELMHAQGKQPSEKQL 33
DP ++FFHWAGKQKGF HT+ASYNA ADQ+PELM +QGK PSEKQ
Sbjct: 131 DPVSASKFFHWAGKQKGFKHTYASYNALAYCLNRSNRFRSADQVPELMDSQGKPPSEKQF 190
Query: 32 EVLVRMHADS 3
E+L+RMH+D+
Sbjct: 191 EILIRMHSDA 200
>ref|XP_006345374.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20740-like [Solanum tuberosum]
Length = 720
Score = 89.0 bits (219), Expect = 6e-16
Identities = 39/70 (55%), Positives = 49/70 (70%)
Frame = -2
Query: 212 DPSLFTRFFHWAGKQKGFHHTFASYNAFXXXXXXXXXXXXADQLPELMHAQGKQPSEKQL 33
DP + ++FF+WAGKQKG+ H F+ YNAF ADQ+PELMH QGK PSEKQ
Sbjct: 130 DPKISSKFFYWAGKQKGYRHDFSCYNAFAYGLNRANQFRTADQVPELMHMQGKPPSEKQF 189
Query: 32 EVLVRMHADS 3
E+L+RMH D+
Sbjct: 190 EILIRMHGDA 199
>ref|XP_004229293.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20740-like [Solanum lycopersicum]
Length = 1256
Score = 89.0 bits (219), Expect = 6e-16
Identities = 39/70 (55%), Positives = 49/70 (70%)
Frame = -2
Query: 212 DPSLFTRFFHWAGKQKGFHHTFASYNAFXXXXXXXXXXXXADQLPELMHAQGKQPSEKQL 33
DP + ++FF+WAGKQKG+ H F+ YNAF ADQ+PELMH QGK PSEKQ
Sbjct: 701 DPKISSKFFYWAGKQKGYRHDFSCYNAFAYGLNRANQFRTADQVPELMHMQGKPPSEKQF 760
Query: 32 EVLVRMHADS 3
E+L+RMH D+
Sbjct: 761 EILIRMHGDA 770
>ref|XP_006482966.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20740-like [Citrus sinensis]
Length = 721
Score = 88.6 bits (218), Expect = 8e-16
Identities = 40/69 (57%), Positives = 50/69 (72%)
Frame = -2
Query: 212 DPSLFTRFFHWAGKQKGFHHTFASYNAFXXXXXXXXXXXXADQLPELMHAQGKQPSEKQL 33
+P+L ++FFHWAGKQKG+ H FASYNA ADQ+PELM +QGK P+EKQ
Sbjct: 131 NPTLASKFFHWAGKQKGYKHNFASYNALAYCLSRNNLFRAADQVPELMDSQGKPPTEKQF 190
Query: 32 EVLVRMHAD 6
E+L+RMHAD
Sbjct: 191 EILIRMHAD 199
>ref|XP_006438906.1| hypothetical protein CICLE_v10030824mg [Citrus clementina]
gi|557541102|gb|ESR52146.1| hypothetical protein
CICLE_v10030824mg [Citrus clementina]
Length = 721
Score = 88.6 bits (218), Expect = 8e-16
Identities = 40/69 (57%), Positives = 50/69 (72%)
Frame = -2
Query: 212 DPSLFTRFFHWAGKQKGFHHTFASYNAFXXXXXXXXXXXXADQLPELMHAQGKQPSEKQL 33
+P+L ++FFHWAGKQKG+ H FASYNA ADQ+PELM +QGK P+EKQ
Sbjct: 131 NPTLASKFFHWAGKQKGYKHNFASYNALAYCLSRNNLFRAADQVPELMDSQGKPPTEKQF 190
Query: 32 EVLVRMHAD 6
E+L+RMHAD
Sbjct: 191 EILIRMHAD 199
>ref|NP_193806.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75211707|sp|Q9SVH3.1|PP328_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At4g20740 gi|5262214|emb|CAB45840.1| putative protein
[Arabidopsis thaliana] gi|7268870|emb|CAB79074.1|
putative protein [Arabidopsis thaliana]
gi|332658957|gb|AEE84357.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 727
Score = 88.2 bits (217), Expect = 1e-15
Identities = 40/70 (57%), Positives = 50/70 (71%)
Frame = -2
Query: 212 DPSLFTRFFHWAGKQKGFHHTFASYNAFXXXXXXXXXXXXADQLPELMHAQGKQPSEKQL 33
D ++ +FFHWAGKQKG+ H FA+YNAF ADQLPELM +QG+ PSEKQ
Sbjct: 137 DAAVAAKFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQF 196
Query: 32 EVLVRMHADS 3
E+L+RMHAD+
Sbjct: 197 EILIRMHADN 206
>ref|XP_006605814.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20740-like isoform X2 [Glycine max]
gi|571565751|ref|XP_003555182.2| PREDICTED:
pentatricopeptide repeat-containing protein
At4g20740-like isoform X1 [Glycine max]
Length = 764
Score = 87.8 bits (216), Expect = 1e-15
Identities = 39/68 (57%), Positives = 49/68 (72%)
Frame = -2
Query: 206 SLFTRFFHWAGKQKGFHHTFASYNAFXXXXXXXXXXXXADQLPELMHAQGKQPSEKQLEV 27
+L ++FFHWAG Q+G+HH FASYNA ADQLPELM +QGK PSEKQ E+
Sbjct: 176 TLASKFFHWAGSQRGYHHNFASYNALAYCLNRHHQFRAADQLPELMESQGKPPSEKQFEI 235
Query: 26 LVRMHADS 3
L+RMH+D+
Sbjct: 236 LIRMHSDA 243
>ref|XP_004494981.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20740-like [Cicer arietinum]
Length = 720
Score = 87.8 bits (216), Expect = 1e-15
Identities = 40/70 (57%), Positives = 49/70 (70%)
Frame = -2
Query: 212 DPSLFTRFFHWAGKQKGFHHTFASYNAFXXXXXXXXXXXXADQLPELMHAQGKQPSEKQL 33
+P+L +FFHW QKG+HH FAS+NAF ADQLPELM AQGK PSEKQ
Sbjct: 130 NPTLAFKFFHWVENQKGYHHNFASFNAFAYCLNRANHFHAADQLPELMDAQGKPPSEKQF 189
Query: 32 EVLVRMHADS 3
E+L+RMH+D+
Sbjct: 190 EILIRMHSDA 199
>ref|XP_002869928.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297315764|gb|EFH46187.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 731
Score = 87.4 bits (215), Expect = 2e-15
Identities = 40/70 (57%), Positives = 49/70 (70%)
Frame = -2
Query: 212 DPSLFTRFFHWAGKQKGFHHTFASYNAFXXXXXXXXXXXXADQLPELMHAQGKQPSEKQL 33
D + +FFHWAGKQKG+ H FA+YNAF ADQLPELM +QG+ PSEKQ
Sbjct: 141 DATAAAKFFHWAGKQKGYKHDFAAYNAFAYCLNRNGHFRAADQLPELMDSQGRPPSEKQF 200
Query: 32 EVLVRMHADS 3
E+L+RMHAD+
Sbjct: 201 EILIRMHADN 210
>ref|XP_006413862.1| hypothetical protein EUTSA_v10024515mg [Eutrema salsugineum]
gi|557115032|gb|ESQ55315.1| hypothetical protein
EUTSA_v10024515mg [Eutrema salsugineum]
Length = 735
Score = 87.0 bits (214), Expect = 2e-15
Identities = 39/70 (55%), Positives = 50/70 (71%)
Frame = -2
Query: 212 DPSLFTRFFHWAGKQKGFHHTFASYNAFXXXXXXXXXXXXADQLPELMHAQGKQPSEKQL 33
D ++ +FFHWAGKQKG+ H FA+YNAF ADQLPELM +QG+ PSEKQ
Sbjct: 139 DAAVSAKFFHWAGKQKGYKHDFAAYNAFAYCLNRTGHFRAADQLPELMDSQGRPPSEKQF 198
Query: 32 EVLVRMHADS 3
E+L+RMH+D+
Sbjct: 199 EILIRMHSDN 208
>ref|XP_004305399.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20740-like [Fragaria vesca subsp. vesca]
Length = 1089
Score = 85.9 bits (211), Expect = 5e-15
Identities = 39/70 (55%), Positives = 49/70 (70%)
Frame = -2
Query: 212 DPSLFTRFFHWAGKQKGFHHTFASYNAFXXXXXXXXXXXXADQLPELMHAQGKQPSEKQL 33
DP ++ FHWAGKQKGF HTFASYNA ADQ+P+LM +QGK P+EKQ
Sbjct: 528 DPVSASKLFHWAGKQKGFKHTFASYNALTYCLNRAHRFRSADQVPDLMDSQGKPPTEKQF 587
Query: 32 EVLVRMHADS 3
E+L+RMH+D+
Sbjct: 588 EILIRMHSDA 597