BLASTX nr result

ID: Zingiber23_contig00046223 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00046223
         (221 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002865001.1| hypothetical protein ARALYDRAFT_496850 [Arab...    55   7e-06
ref|XP_002285260.1| PREDICTED: zinc finger protein ZAT10-like [V...    55   1e-05
emb|CAN61394.1| hypothetical protein VITISV_013327 [Vitis vinifera]    55   1e-05

>ref|XP_002865001.1| hypothetical protein ARALYDRAFT_496850 [Arabidopsis lyrata subsp.
           lyrata] gi|297310836|gb|EFH41260.1| hypothetical protein
           ARALYDRAFT_496850 [Arabidopsis lyrata subsp. lyrata]
          Length = 246

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 24/44 (54%), Positives = 32/44 (72%)
 Frame = +2

Query: 89  VESWAKKKRSKRPRADSSSQSDEGGDRRMPTEEEYLALCLMMLS 220
           +E WAK+KR+KR R D   Q+ E     +P+EEEYLALCL+ML+
Sbjct: 30  LEQWAKRKRTKRQRFDHGHQNQETNKNHLPSEEEYLALCLLMLA 73


>ref|XP_002285260.1| PREDICTED: zinc finger protein ZAT10-like [Vitis vinifera]
          Length = 233

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
 Frame = +2

Query: 38  IRVINSEERPSA------PPVYQVESWAKKKRSKRPRADSSSQSDEGGDRRMPTEEEYLA 199
           +  +NS   P+       P ++ +ESWAK+KRSKRPR D+            PTEEEYLA
Sbjct: 3   LEALNSPTTPTPSFHYEQPSLHSLESWAKRKRSKRPRFDN-----------QPTEEEYLA 51

Query: 200 LCLMMLS 220
           LCL+ML+
Sbjct: 52  LCLIMLA 58


>emb|CAN61394.1| hypothetical protein VITISV_013327 [Vitis vinifera]
          Length = 233

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 30/67 (44%), Positives = 40/67 (59%), Gaps = 6/67 (8%)
 Frame = +2

Query: 38  IRVINSEERPSA------PPVYQVESWAKKKRSKRPRADSSSQSDEGGDRRMPTEEEYLA 199
           +  +NS   P+       P ++ +ESWAK+KRSKRPR D+            PTEEEYLA
Sbjct: 3   LEALNSPTTPTPSFHYEQPSLHSLESWAKRKRSKRPRFDN-----------QPTEEEYLA 51

Query: 200 LCLMMLS 220
           LCL+ML+
Sbjct: 52  LCLIMLA 58


Top