BLASTX nr result

ID: Zingiber23_contig00046216 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00046216
         (316 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indi...    57   3e-06
ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group] g...    57   3e-06

>gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
          Length = 874

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 37/108 (34%), Positives = 51/108 (47%), Gaps = 19/108 (17%)
 Frame = -1

Query: 298 RLHFFYLGRNFHRQGLSLLLRAPRSEISLDCSPCSCV----GSLPGGILSRQLH------ 149
           R+ F Y  R    + L     A R  + +D +  SCV     S+P  +L  QLH      
Sbjct: 69  RVLFDYARRGMVPEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKC 128

Query: 148 ---------GTSLLDNCIKCAVVNEGMDVFKSMPERNEAGWNPLFTGC 32
                    GTSL+D  +KC  V EG++VF+ MP++N   W  L TGC
Sbjct: 129 GHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGC 176


>ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
           gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa
           Japonica Group] gi|113579278|dbj|BAF17641.1|
           Os05g0455900 [Oryza sativa Japonica Group]
           gi|222631826|gb|EEE63958.1| hypothetical protein
           OsJ_18783 [Oryza sativa Japonica Group]
          Length = 874

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 37/108 (34%), Positives = 51/108 (47%), Gaps = 19/108 (17%)
 Frame = -1

Query: 298 RLHFFYLGRNFHRQGLSLLLRAPRSEISLDCSPCSCV----GSLPGGILSRQLH------ 149
           R+ F Y  R    + L     A R  + +D +  SCV     S+P  +L  QLH      
Sbjct: 69  RVLFDYARRGMVLEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKC 128

Query: 148 ---------GTSLLDNCIKCAVVNEGMDVFKSMPERNEAGWNPLFTGC 32
                    GTSL+D  +KC  V EG++VF+ MP++N   W  L TGC
Sbjct: 129 GHDRGEVSAGTSLVDMYMKCGSVCEGIEVFEGMPKKNVVTWTSLLTGC 176


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