BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00046094
         (406 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003559839.1| PREDICTED: pentatricopeptide repeat-containi...   135   6e-30
gb|EAZ28544.1| hypothetical protein OsJ_12524 [Oryza sativa Japo...   130   2e-28
gb|EAY91821.1| hypothetical protein OsI_13463 [Oryza sativa Indi...   130   2e-28
gb|AAP12991.1| hypothetical protein [Oryza sativa Japonica Group...   130   2e-28
ref|XP_006651805.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   122   5e-26
ref|XP_004981816.1| PREDICTED: pentatricopeptide repeat-containi...   121   1e-25
tpg|DAA51276.1| TPA: methyltransferase small domain protein [Zea...   120   1e-25
ref|NP_001147435.1| methyltransferase small domain [Zea mays] gi...   120   1e-25
ref|XP_006299672.1| hypothetical protein CARUB_v10015860mg [Caps...   119   3e-25
ref|XP_002466476.1| hypothetical protein SORBIDRAFT_01g008465 [S...   119   3e-25
ref|XP_002275085.1| PREDICTED: pentatricopeptide repeat-containi...   119   4e-25
ref|XP_002884467.1| pentatricopeptide repeat-containing protein ...   117   1e-24
ref|XP_002531291.1| pentatricopeptide repeat-containing protein,...   117   1e-24
ref|XP_006408155.1| hypothetical protein EUTSA_v10020244mg [Eutr...   117   2e-24
ref|XP_006382794.1| hypothetical protein POPTR_0005s05510g [Popu...   115   5e-24
ref|XP_002328495.1| predicted protein [Populus trichocarpa]           115   5e-24
ref|NP_187126.1| pentatricopeptide repeat-containing protein [Ar...   115   5e-24
ref|XP_006471681.1| PREDICTED: pentatricopeptide repeat-containi...   110   1e-22
ref|XP_006432926.1| hypothetical protein CICLE_v10000494mg [Citr...   110   1e-22
ref|XP_004171232.1| PREDICTED: pentatricopeptide repeat-containi...   110   1e-22

>ref|XP_003559839.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
           mitochondrial-like [Brachypodium distachyon]
          Length = 601

 Score =  135 bits (340), Expect = 6e-30
 Identities = 69/132 (52%), Positives = 95/132 (71%)
 Frame = +3

Query: 3   YLQNSLMKMYLYAGDAASARHVFDHMPEQDLVSCNIMLSGLAKEGRCVEALELLRYMEAS 182
           YL+NSL+KMYL AGDA +A  +F  +P  D+VSCNIMLSG  K G  V AL+L R M + 
Sbjct: 153 YLRNSLIKMYLDAGDAETAEAMFQSVPVPDVVSCNIMLSGYVKGGCVVNALQLFRDMASR 212

Query: 183 GIELDEYTMVGLLVCCCQLKNARLGKAVHGMIIRKMALSGGSSNSCLILNNALMDLYAKC 362
            I +D+Y  V LL CC +LKNA LG++VHG+++R+M +     +  LIL+NAL+D+YAKC
Sbjct: 213 EIGVDQYAAVALLSCCGRLKNALLGRSVHGVVVRRMDI----KDRGLILSNALLDMYAKC 268

Query: 363 GELDLAVEVFNK 398
           GE++ A+ VF +
Sbjct: 269 GEMNTAMRVFGE 280



 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 47/164 (28%), Positives = 70/164 (42%), Gaps = 31/164 (18%)
 Frame = +3

Query: 6   LQNSLMKMYLYAGDAASARHVFDHMPEQDLVSCNIMLSGLAKEG---------------- 137
           L N+L+ MY   G+  +A  VF    E+D +S N M++G A +G                
Sbjct: 257 LSNALLDMYAKCGEMNTAMRVFGEAKEKDDISWNTMIAGFANDGMLDLASKFFFDAPCRD 316

Query: 138 ------------RCVE---ALELLRYMEASGIELDEYTMVGLLVCCCQLKNARLGKAVHG 272
                       RC E    +EL   M +S +  D+ T V L+          LGK+VHG
Sbjct: 317 LISWNTLLAGYGRCREFAAVMELFNDMLSSRVRPDKVTAVTLISAAVSKGALNLGKSVHG 376

Query: 273 MIIRKMALSGGSSNSCLILNNALMDLYAKCGELDLAVEVFNKML 404
            ++++             L + L+D+Y KCG + LA  VF K L
Sbjct: 377 WVLKEHGTQDA------FLASTLVDMYCKCGNVKLAYAVFEKAL 414


>gb|EAZ28544.1| hypothetical protein OsJ_12524 [Oryza sativa Japonica Group]
          Length = 559

 Score =  130 bits (327), Expect = 2e-28
 Identities = 67/132 (50%), Positives = 93/132 (70%)
 Frame = +3

Query: 3   YLQNSLMKMYLYAGDAASARHVFDHMPEQDLVSCNIMLSGLAKEGRCVEALELLRYMEAS 182
           YL+NSL+KMYL AGD  +A  +F   P  D VSCNIMLSG  K G   +AL   R M + 
Sbjct: 47  YLRNSLIKMYLDAGDVEAAEAMFRCAPTADAVSCNIMLSGYVKGGCSGKALRFFRGMASR 106

Query: 183 GIELDEYTMVGLLVCCCQLKNARLGKAVHGMIIRKMALSGGSSNSCLILNNALMDLYAKC 362
           GI +D+YT V LL CC +LK A LG++VHG+++R++    G ++  LIL+NAL+D+YAKC
Sbjct: 107 GIGVDQYTAVALLACCGRLKKAVLGRSVHGVVVRRI----GVADRGLILSNALLDMYAKC 162

Query: 363 GELDLAVEVFNK 398
           GE++ A+ VF++
Sbjct: 163 GEMNTAMRVFDE 174


>gb|EAY91821.1| hypothetical protein OsI_13463 [Oryza sativa Indica Group]
          Length = 468

 Score =  130 bits (327), Expect = 2e-28
 Identities = 67/132 (50%), Positives = 93/132 (70%)
 Frame = +3

Query: 3   YLQNSLMKMYLYAGDAASARHVFDHMPEQDLVSCNIMLSGLAKEGRCVEALELLRYMEAS 182
           YL+NSL+KMYL AGD  +A  +F   P  D VSCNIMLSG  K G   +AL   R M + 
Sbjct: 164 YLRNSLIKMYLDAGDVEAAEAMFRCAPTADAVSCNIMLSGYVKGGCSGKALRFFRGMASR 223

Query: 183 GIELDEYTMVGLLVCCCQLKNARLGKAVHGMIIRKMALSGGSSNSCLILNNALMDLYAKC 362
           GI +D+YT V LL CC +LK A LG++VHG+++R++    G ++  LIL+NAL+D+YAKC
Sbjct: 224 GIGVDQYTAVALLACCGRLKKAVLGRSVHGVVVRRI----GVADRGLILSNALLDMYAKC 279

Query: 363 GELDLAVEVFNK 398
           GE++ A+ VF++
Sbjct: 280 GEMNTAMRVFDE 291


>gb|AAP12991.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|40539031|gb|AAR87288.1| putative PPR repeat
           containing protein [Oryza sativa Japonica Group]
           gi|108711017|gb|ABF98812.1| pentatricopeptide, putative,
           expressed [Oryza sativa Japonica Group]
          Length = 676

 Score =  130 bits (327), Expect = 2e-28
 Identities = 67/132 (50%), Positives = 93/132 (70%)
 Frame = +3

Query: 3   YLQNSLMKMYLYAGDAASARHVFDHMPEQDLVSCNIMLSGLAKEGRCVEALELLRYMEAS 182
           YL+NSL+KMYL AGD  +A  +F   P  D VSCNIMLSG  K G   +AL   R M + 
Sbjct: 164 YLRNSLIKMYLDAGDVEAAEAMFRCAPTADAVSCNIMLSGYVKGGCSGKALRFFRGMASR 223

Query: 183 GIELDEYTMVGLLVCCCQLKNARLGKAVHGMIIRKMALSGGSSNSCLILNNALMDLYAKC 362
           GI +D+YT V LL CC +LK A LG++VHG+++R++    G ++  LIL+NAL+D+YAKC
Sbjct: 224 GIGVDQYTAVALLACCGRLKKAVLGRSVHGVVVRRI----GVADRGLILSNALLDMYAKC 279

Query: 363 GELDLAVEVFNK 398
           GE++ A+ VF++
Sbjct: 280 GEMNTAMRVFDE 291


>ref|XP_006651805.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g04750, mitochondrial-like [Oryza
           brachyantha]
          Length = 640

 Score =  122 bits (306), Expect = 5e-26
 Identities = 62/132 (46%), Positives = 90/132 (68%)
 Frame = +3

Query: 3   YLQNSLMKMYLYAGDAASARHVFDHMPEQDLVSCNIMLSGLAKEGRCVEALELLRYMEAS 182
           YL+NSL+KMYL AG+  +A  +F   P  D V CNIMLSG  K G   +AL     M + 
Sbjct: 157 YLRNSLIKMYLDAGNVEAAEAMFRCAPTADTVCCNIMLSGYVKGGCSGKALRFFHGMASK 216

Query: 183 GIELDEYTMVGLLVCCCQLKNARLGKAVHGMIIRKMALSGGSSNSCLILNNALMDLYAKC 362
           G+ +D+YT V LL CC +LK A LG++VHG+++R++ +    ++  LIL+NAL+D+YAKC
Sbjct: 217 GVGVDQYTAVALLACCGRLKKALLGRSVHGVVVRRIDV----ADRGLILSNALLDMYAKC 272

Query: 363 GELDLAVEVFNK 398
           GE++ A+ VF +
Sbjct: 273 GEMNKAMRVFGE 284



 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 37/131 (28%), Positives = 63/131 (48%)
 Frame = +3

Query: 12  NSLMKMYLYAGDAASARHVFDHMPEQDLVSCNIMLSGLAKEGRCVEALELLRYMEASGIE 191
           N+++  +  AG    A   F   P +D++S N +L+G A+       ++L   M  S + 
Sbjct: 294 NTMVAGFANAGMLDLASEYFAESPARDIISWNALLAGYARYKEFTATMKLFDDMLVSCVR 353

Query: 192 LDEYTMVGLLVCCCQLKNARLGKAVHGMIIRKMALSGGSSNSCLILNNALMDLYAKCGEL 371
            D+ T V L+          LGK++HG ++++             L +AL+D+Y KCG +
Sbjct: 354 PDKVTAVTLISAVAGKGTPNLGKSIHGWVVKEHGTQDA------FLASALVDMYCKCGNV 407

Query: 372 DLAVEVFNKML 404
            LA  VF K +
Sbjct: 408 KLAHAVFEKAM 418


>ref|XP_004981816.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
           mitochondrial-like isoform X1 [Setaria italica]
           gi|514814078|ref|XP_004981817.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g04750,
           mitochondrial-like isoform X2 [Setaria italica]
          Length = 603

 Score =  121 bits (303), Expect = 1e-25
 Identities = 66/132 (50%), Positives = 86/132 (65%)
 Frame = +3

Query: 3   YLQNSLMKMYLYAGDAASARHVFDHMPEQDLVSCNIMLSGLAKEGRCVEALELLRYMEAS 182
           YL+NSL+KMYL AGD  +A  +F   P  D VS NIMLSG   EG   +AL   R   + 
Sbjct: 160 YLRNSLIKMYLDAGDVETAELMFGSTPVSDTVSFNIMLSGYVNEGCTAKALLFFRDTASK 219

Query: 183 GIELDEYTMVGLLVCCCQLKNARLGKAVHGMIIRKMALSGGSSNSCLILNNALMDLYAKC 362
           GI +D+Y  V LL C  +LKNA LG++VHG+I+R+M       +  LIL NAL+D+YAKC
Sbjct: 220 GIAVDQYMAVALLTCSGRLKNAFLGRSVHGVIVRRM----DPGDWGLILMNALLDMYAKC 275

Query: 363 GELDLAVEVFNK 398
           GE+D A+ VF +
Sbjct: 276 GEMDAAMRVFGE 287


>tpg|DAA51276.1| TPA: methyltransferase small domain protein [Zea mays]
          Length = 601

 Score =  120 bits (302), Expect = 1e-25
 Identities = 63/132 (47%), Positives = 88/132 (66%)
 Frame = +3

Query: 3   YLQNSLMKMYLYAGDAASARHVFDHMPEQDLVSCNIMLSGLAKEGRCVEALELLRYMEAS 182
           YL+NSL+KMY+ AGD  +A  +F      D VSCNIMLSG   EG  ++AL   R M + 
Sbjct: 157 YLRNSLIKMYIDAGDVETAELMFRSALVLDTVSCNIMLSGYVNEGCTLKALWFFRDMASR 216

Query: 183 GIELDEYTMVGLLVCCCQLKNARLGKAVHGMIIRKMALSGGSSNSCLILNNALMDLYAKC 362
           GI +D+YT V LL CC +LKN  +G++VHG+I+R+M     + +  LIL NAL+D+YAKC
Sbjct: 217 GIVVDQYTAVALLTCCGRLKNELIGRSVHGVIVRRM----DAGDHGLILVNALLDMYAKC 272

Query: 363 GELDLAVEVFNK 398
           G ++ A  +F +
Sbjct: 273 GRMNAAKTIFGE 284



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 40/131 (30%), Positives = 66/131 (50%)
 Frame = +3

Query: 12  NSLMKMYLYAGDAASARHVFDHMPEQDLVSCNIMLSGLAKEGRCVEALELLRYMEASGIE 191
           N+++  ++ AG    A   F   P +DL+S N +L+G A+     E ++L   M AS + 
Sbjct: 294 NTMVSGFVNAGMLDLASRFFSEAPSRDLISWNALLAGYARYKSFNEVMKLFHDMVASCVN 353

Query: 192 LDEYTMVGLLVCCCQLKNARLGKAVHGMIIRKMALSGGSSNSCLILNNALMDLYAKCGEL 371
           LD+ T V L+       +    K+VHG ++++        +    L +AL+D+Y KCG +
Sbjct: 354 LDKVTAVTLISAATGKGSLNHAKSVHGWVVKEF------DHQDAFLASALVDMYCKCGNV 407

Query: 372 DLAVEVFNKML 404
             A  VF K L
Sbjct: 408 KTAYYVFEKAL 418


>ref|NP_001147435.1| methyltransferase small domain [Zea mays]
           gi|195611352|gb|ACG27506.1| methyltransferase small
           domain [Zea mays]
          Length = 601

 Score =  120 bits (302), Expect = 1e-25
 Identities = 63/132 (47%), Positives = 88/132 (66%)
 Frame = +3

Query: 3   YLQNSLMKMYLYAGDAASARHVFDHMPEQDLVSCNIMLSGLAKEGRCVEALELLRYMEAS 182
           YL+NSL+KMY+ AGD  +A  +F      D VSCNIMLSG   EG  ++AL   R M + 
Sbjct: 157 YLRNSLIKMYIDAGDVETAELMFRSALVLDTVSCNIMLSGYVNEGCTLKALWFFRDMASR 216

Query: 183 GIELDEYTMVGLLVCCCQLKNARLGKAVHGMIIRKMALSGGSSNSCLILNNALMDLYAKC 362
           GI +D+YT V LL CC +LKN  +G++VHG+I+R+M     + +  LIL NAL+D+YAKC
Sbjct: 217 GIVVDQYTAVALLTCCGRLKNELIGRSVHGVIVRRM----DAGDHGLILVNALLDMYAKC 272

Query: 363 GELDLAVEVFNK 398
           G ++ A  +F +
Sbjct: 273 GRMNAAKTIFGE 284



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 40/131 (30%), Positives = 67/131 (51%)
 Frame = +3

Query: 12  NSLMKMYLYAGDAASARHVFDHMPEQDLVSCNIMLSGLAKEGRCVEALELLRYMEASGIE 191
           N+++  ++ AG    A   F   P +DL+S N +L+G A+     E ++L   M AS + 
Sbjct: 294 NTMVSGFVNAGMLDLASRFFSEAPSRDLISWNALLAGYARYKGFNEVMKLFHDMLASCVN 353

Query: 192 LDEYTMVGLLVCCCQLKNARLGKAVHGMIIRKMALSGGSSNSCLILNNALMDLYAKCGEL 371
           LD+ T V L+       +    K+VHG ++++        +    L +AL+D+Y KCG +
Sbjct: 354 LDKVTAVTLISAAAGKGSLNHAKSVHGWVVKEFG------HQDAFLASALVDMYCKCGNV 407

Query: 372 DLAVEVFNKML 404
            +A  VF K L
Sbjct: 408 KIAYYVFEKAL 418


>ref|XP_006299672.1| hypothetical protein CARUB_v10015860mg [Capsella rubella]
           gi|482568381|gb|EOA32570.1| hypothetical protein
           CARUB_v10015860mg [Capsella rubella]
          Length = 651

 Score =  119 bits (299), Expect = 3e-25
 Identities = 68/133 (51%), Positives = 86/133 (64%)
 Frame = +3

Query: 3   YLQNSLMKMYLYAGDAASARHVFDHMPEQDLVSCNIMLSGLAKEGRCVEALELLRYMEAS 182
           YL NSL+K+Y+  G    A  VF  MPE D+ S N+M+ G AK+G C+EAL+L   M   
Sbjct: 162 YLWNSLVKLYMELGSLGFAEKVFAIMPEPDVSSFNVMIVGYAKKGFCLEALKLYYKMVGD 221

Query: 183 GIELDEYTMVGLLVCCCQLKNARLGKAVHGMIIRKMALSGGSSNSCLILNNALMDLYAKC 362
           GIE DEY ++GLLVC  QL + RLGK VHG I R+    G SSN  LIL+NAL+D+Y KC
Sbjct: 222 GIEPDEYAVLGLLVCSGQLSDTRLGKGVHGWIERRR--PGHSSN--LILSNALLDMYFKC 277

Query: 363 GELDLAVEVFNKM 401
            +  LA   F+ M
Sbjct: 278 KDSGLAKRAFDAM 290



 Score = 68.9 bits (167), Expect = 6e-10
 Identities = 45/129 (34%), Positives = 73/129 (56%), Gaps = 2/129 (1%)
 Frame = +3

Query: 12  NSLMKMYLYAGDAASARHVFDHMPEQDLVSCNIMLSGLAKEGRCVEALELLRY--MEASG 185
           N+++  ++  GD  +A+  FD MP++DLVS N +L G +K+G    A+  L Y  +    
Sbjct: 299 NTMVAGFVRLGDMEAAQAFFDQMPKRDLVSWNSLLFGYSKKGCDQSAVRELFYEMLITEK 358

Query: 186 IELDEYTMVGLLVCCCQLKNARLGKAVHGMIIRKMALSGGSSNSCLILNNALMDLYAKCG 365
           I+ D  TMV L+       +   G+ VHG++IR + L G +      L++AL+D+Y KCG
Sbjct: 359 IKPDRVTMVSLISGAANNGDLSHGRWVHGLVIR-LQLKGDA-----FLSSALIDMYCKCG 412

Query: 366 ELDLAVEVF 392
            ++ A  VF
Sbjct: 413 IIERAFMVF 421


>ref|XP_002466476.1| hypothetical protein SORBIDRAFT_01g008465 [Sorghum bicolor]
           gi|241920330|gb|EER93474.1| hypothetical protein
           SORBIDRAFT_01g008465 [Sorghum bicolor]
          Length = 599

 Score =  119 bits (299), Expect = 3e-25
 Identities = 64/132 (48%), Positives = 86/132 (65%)
 Frame = +3

Query: 3   YLQNSLMKMYLYAGDAASARHVFDHMPEQDLVSCNIMLSGLAKEGRCVEALELLRYMEAS 182
           YL+NSL+KMY+ AGD  +A  +F      D VSCNIMLSG   EG  ++AL   R M + 
Sbjct: 160 YLRNSLIKMYIDAGDVETAELMFRSALVLDTVSCNIMLSGYVNEGCSLKALCFFRDMASR 219

Query: 183 GIELDEYTMVGLLVCCCQLKNARLGKAVHGMIIRKMALSGGSSNSCLILNNALMDLYAKC 362
           GI  D YT V LL CC +LK   LG++VHG+I+R+M     + ++ LIL NAL+D+YAKC
Sbjct: 220 GIVADRYTAVALLTCCGRLKTVLLGRSVHGVIVRRM----DAGDNWLILVNALLDMYAKC 275

Query: 363 GELDLAVEVFNK 398
           G ++ A  VF +
Sbjct: 276 GRMNAAERVFGE 287


>ref|XP_002275085.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
           mitochondrial-like [Vitis vinifera]
          Length = 654

 Score =  119 bits (298), Expect = 4e-25
 Identities = 65/131 (49%), Positives = 86/131 (65%)
 Frame = +3

Query: 3   YLQNSLMKMYLYAGDAASARHVFDHMPEQDLVSCNIMLSGLAKEGRCVEALELLRYMEAS 182
           YLQN+LMK+YL       A  VF  M   D VS NIM+ G AK+G  +EAL+ L  M   
Sbjct: 163 YLQNTLMKIYLENEKMGLAYQVFQQMAAPDAVSFNIMIFGYAKKGHNIEALKFLHEMVGL 222

Query: 183 GIELDEYTMVGLLVCCCQLKNARLGKAVHGMIIRKMALSGGSSNSCLILNNALMDLYAKC 362
           G++ DE+TM+GLL+CC +L +A+LGK+VH  I R+    G   +S LILNNAL+D+Y KC
Sbjct: 223 GLKPDEFTMLGLLICCGRLGDAQLGKSVHAWIERR----GLIKSSNLILNNALLDMYVKC 278

Query: 363 GELDLAVEVFN 395
            EL +A  +FN
Sbjct: 279 KELRIAQSIFN 289



 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 1/131 (0%)
 Frame = +3

Query: 12  NSLMKMYLYAGDAASARHVFDHMPEQDLVSCNIMLSGLAKEGRCVEALELLRYMEASGIE 191
           N+++  Y   G+   A + F+ MP +DLVS N +++G A++G C+    L   M A  I 
Sbjct: 300 NTMIAGYAKVGNLEIAHNFFEDMPCRDLVSWNSIIAGYAQKGDCLMVQRLFENMVAENIW 359

Query: 192 LDEYTMVGLLVCCCQLKNARLGKAVHGMIIR-KMALSGGSSNSCLILNNALMDLYAKCGE 368
            D  T++ L+    ++     G+ +HG ++R +M +          L +A +D+Y KCG 
Sbjct: 360 PDFVTIINLVSAAAEIGALHHGRWIHGWVVRMQMKIDA-------FLGSAFIDMYWKCGS 412

Query: 369 LDLAVEVFNKM 401
           +  A  VF ++
Sbjct: 413 IKRACMVFREV 423


>ref|XP_002884467.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297330307|gb|EFH60726.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 657

 Score =  117 bits (294), Expect = 1e-24
 Identities = 66/133 (49%), Positives = 84/133 (63%)
 Frame = +3

Query: 3   YLQNSLMKMYLYAGDAASARHVFDHMPEQDLVSCNIMLSGLAKEGRCVEALELLRYMEAS 182
           YL NSL+K Y+  G    A  VF  MP+ D+ S N+M+ G AK+G  +EALEL   M + 
Sbjct: 166 YLWNSLVKFYMELGSLGFAEKVFAIMPQPDVSSFNVMIVGYAKQGFGLEALELYYKMVSD 225

Query: 183 GIELDEYTMVGLLVCCCQLKNARLGKAVHGMIIRKMALSGGSSNSCLILNNALMDLYAKC 362
           GIE DEYT++GLLVCC  L + RLGK VHG I R+    G   +S LIL NAL+D+Y KC
Sbjct: 226 GIEPDEYTLLGLLVCCGHLSDIRLGKGVHGWIERR----GPVYSSNLILRNALLDMYFKC 281

Query: 363 GELDLAVEVFNKM 401
            E  LA   F+ +
Sbjct: 282 KESGLAKRAFDAL 294



 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 44/129 (34%), Positives = 72/129 (55%), Gaps = 2/129 (1%)
 Frame = +3

Query: 12  NSLMKMYLYAGDAASARHVFDHMPEQDLVSCNIMLSGLAKEGRCVEALELLRY--MEASG 185
           N+++  ++  GD  +A+ VFD MP++DLVS N +L   +K+G    A+  L Y  +    
Sbjct: 303 NTMVVGFVRLGDMEAAQAVFDQMPQRDLVSWNSLLFCYSKKGCDQRAVRELFYEMLIVEK 362

Query: 186 IELDEYTMVGLLVCCCQLKNARLGKAVHGMIIRKMALSGGSSNSCLILNNALMDLYAKCG 365
           ++ D  TMV L+           G+ VHG++IR + L G +      L++AL+D+Y KCG
Sbjct: 363 VKPDRVTMVSLISGAANNGELSHGRWVHGLMIR-LQLEGDA-----FLSSALIDMYCKCG 416

Query: 366 ELDLAVEVF 392
            ++ A  VF
Sbjct: 417 LIERAFMVF 425


>ref|XP_002531291.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223529124|gb|EEF31104.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 517

 Score =  117 bits (294), Expect = 1e-24
 Identities = 67/133 (50%), Positives = 90/133 (67%)
 Frame = +3

Query: 3   YLQNSLMKMYLYAGDAASARHVFDHMPEQDLVSCNIMLSGLAKEGRCVEALELLRYMEAS 182
           YLQNSL+K+YL  G    A  +F  MP  D+VS NIM++G AK+G  +EA++LL  M A 
Sbjct: 161 YLQNSLIKVYLENGLFCLAHKIFRQMPAPDVVSFNIMITGCAKQGCGLEAIQLLYDMMAL 220

Query: 183 GIELDEYTMVGLLVCCCQLKNARLGKAVHGMIIRKMALSGGSSNSCLILNNALMDLYAKC 362
            ++ DE+TM+GLLV C +L  AR GK VH  I R+ +++  SSN  LIL NAL+D+Y KC
Sbjct: 221 DLKPDEFTMLGLLVSCGKLGEARFGKTVHAWIERRKSIT--SSN--LILGNALLDMYVKC 276

Query: 363 GELDLAVEVFNKM 401
            ELDLA   F+ +
Sbjct: 277 QELDLAHRTFSAL 289



 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 39/131 (29%), Positives = 66/131 (50%)
 Frame = +3

Query: 12  NSLMKMYLYAGDAASARHVFDHMPEQDLVSCNIMLSGLAKEGRCVEALELLRYMEASGIE 191
           N+++     AGD   AR +FD MP +D VS N +++  A  G  +   +LL  M A  + 
Sbjct: 298 NTIIAGCAKAGDLELARTLFDQMPCRDFVSWNSLIAEYANRGDFIIVRDLLYDMVAENVV 357

Query: 192 LDEYTMVGLLVCCCQLKNARLGKAVHGMIIRKMALSGGSSNSCLILNNALMDLYAKCGEL 371
            +  TM  L+    ++     G+  HG +IR             +L +AL+D+Y KCG +
Sbjct: 358 PNNTTMASLISAAAEIGALDQGRWAHGWVIRMQIKIDA------VLGSALIDMYCKCGSI 411

Query: 372 DLAVEVFNKML 404
           + A  +FN+++
Sbjct: 412 NNAFLIFNEII 422


>ref|XP_006408155.1| hypothetical protein EUTSA_v10020244mg [Eutrema salsugineum]
           gi|557109301|gb|ESQ49608.1| hypothetical protein
           EUTSA_v10020244mg [Eutrema salsugineum]
          Length = 656

 Score =  117 bits (292), Expect = 2e-24
 Identities = 67/133 (50%), Positives = 84/133 (63%)
 Frame = +3

Query: 3   YLQNSLMKMYLYAGDAASARHVFDHMPEQDLVSCNIMLSGLAKEGRCVEALELLRYMEAS 182
           YL NSL+ +Y+  G    A  VFD M E D+ S N M++G A++G  +EALEL   M   
Sbjct: 162 YLWNSLVMVYMELGSLGFAEKVFDTMTEPDVSSFNTMIAGYARKGFSLEALELYYKMVGD 221

Query: 183 GIELDEYTMVGLLVCCCQLKNARLGKAVHGMIIRKMALSGGSSNSCLILNNALMDLYAKC 362
           GIE DEY ++GLLVCC QL + RLGK VHG I R+    G SSN  LIL+NAL+D+Y KC
Sbjct: 222 GIEPDEYAVLGLLVCCGQLSDIRLGKGVHGWIERRK--PGSSSN--LILSNALLDMYFKC 277

Query: 363 GELDLAVEVFNKM 401
            E  L    F+ M
Sbjct: 278 KEPGLVKRAFDMM 290



 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 40/130 (30%), Positives = 68/130 (52%), Gaps = 3/130 (2%)
 Frame = +3

Query: 12  NSLMKMYLYAGDAASARHVFDHMPEQDLVSCNIMLSGLAKEGRCVEALELL--RYMEASG 185
           N+++  ++  GD  +A+ VF  MP++DLVS N +L G +K+G    A+  L    +    
Sbjct: 299 NTMVGGFVRLGDMEAAQDVFYQMPKRDLVSWNSLLFGYSKKGCDQRAVRELFSEMLIVEK 358

Query: 186 IELDEYTMVGLLVCCCQLKNARLGKAVHGMIIR-KMALSGGSSNSCLILNNALMDLYAKC 362
           +  D  T+V L+           G+ VHG++IR ++ +          L +AL+D+Y KC
Sbjct: 359 VIPDRVTVVSLISGAANNGELDQGRWVHGLMIRLRLKIDA-------FLGSALIDMYCKC 411

Query: 363 GELDLAVEVF 392
           G ++ A  VF
Sbjct: 412 GAIERAFVVF 421


>ref|XP_006382794.1| hypothetical protein POPTR_0005s05510g [Populus trichocarpa]
           gi|550338164|gb|ERP60591.1| hypothetical protein
           POPTR_0005s05510g [Populus trichocarpa]
          Length = 648

 Score =  115 bits (289), Expect = 5e-24
 Identities = 61/133 (45%), Positives = 87/133 (65%)
 Frame = +3

Query: 3   YLQNSLMKMYLYAGDAASARHVFDHMPEQDLVSCNIMLSGLAKEGRCVEALELLRYMEAS 182
           YLQN+L+K+YL  G    A  VF+ MP  D+VS N+M+ G AK+G  +EA+ L   M   
Sbjct: 167 YLQNTLIKVYLENGLVRLAHQVFEKMPSPDIVSFNVMIVGYAKKGFGLEAMRLFHEMVGL 226

Query: 183 GIELDEYTMVGLLVCCCQLKNARLGKAVHGMIIRKMALSGGSSNSCLILNNALMDLYAKC 362
           G+E DE+T++GLLV C QL N + GKAVHG + R+      + +S LIL NAL+D+Y KC
Sbjct: 227 GLEPDEFTILGLLVSCGQLGNVKFGKAVHGWMERRKP----TISSNLILGNALLDMYVKC 282

Query: 363 GELDLAVEVFNKM 401
            +++LA+  F  +
Sbjct: 283 QKVELALRTFGAL 295



 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 36/120 (30%), Positives = 56/120 (46%)
 Frame = +3

Query: 42  GDAASARHVFDHMPEQDLVSCNIMLSGLAKEGRCVEALELLRYMEASGIELDEYTMVGLL 221
           G+   AR  F  MP +D+VS N +++G A  G      EL+  M    +  D  TM+ L+
Sbjct: 314 GEFEQARLFFYQMPCRDIVSWNSLVTGYACRGDFASVKELIVDMVMEKVIPDTVTMISLV 373

Query: 222 VCCCQLKNARLGKAVHGMIIRKMALSGGSSNSCLILNNALMDLYAKCGELDLAVEVFNKM 401
               +      G+  HG +IR              L +AL+D+Y KCG ++ A  VF ++
Sbjct: 374 SAATESGALDQGRWAHGWVIRMQIKLDA------FLGSALIDMYCKCGSIERASRVFKEI 427


>ref|XP_002328495.1| predicted protein [Populus trichocarpa]
          Length = 580

 Score =  115 bits (289), Expect = 5e-24
 Identities = 61/133 (45%), Positives = 87/133 (65%)
 Frame = +3

Query: 3   YLQNSLMKMYLYAGDAASARHVFDHMPEQDLVSCNIMLSGLAKEGRCVEALELLRYMEAS 182
           YLQN+L+K+YL  G    A  VF+ MP  D+VS N+M+ G AK+G  +EA+ L   M   
Sbjct: 99  YLQNTLIKVYLENGLVRLAHQVFEKMPSPDIVSFNVMIVGYAKKGFGLEAMRLFHEMVGL 158

Query: 183 GIELDEYTMVGLLVCCCQLKNARLGKAVHGMIIRKMALSGGSSNSCLILNNALMDLYAKC 362
           G+E DE+T++GLLV C QL N + GKAVHG + R+      + +S LIL NAL+D+Y KC
Sbjct: 159 GLEPDEFTILGLLVSCGQLGNVKFGKAVHGWMERRKP----TISSNLILGNALLDMYVKC 214

Query: 363 GELDLAVEVFNKM 401
            +++LA+  F  +
Sbjct: 215 QKVELALRTFGAL 227



 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 36/120 (30%), Positives = 56/120 (46%)
 Frame = +3

Query: 42  GDAASARHVFDHMPEQDLVSCNIMLSGLAKEGRCVEALELLRYMEASGIELDEYTMVGLL 221
           G+   AR  F  MP +D+VS N +++G A  G      EL+  M    +  D  TM+ L+
Sbjct: 246 GELEQARLFFYQMPCRDIVSWNSLVTGYACRGDFASVKELIVDMVMEKVIPDTVTMISLV 305

Query: 222 VCCCQLKNARLGKAVHGMIIRKMALSGGSSNSCLILNNALMDLYAKCGELDLAVEVFNKM 401
               +      G+  HG +IR              L +AL+D+Y KCG ++ A  VF ++
Sbjct: 306 SAATESGALDQGRWAHGWVIRMQIKLDA------FLGSALIDMYCKCGSIERASRVFKEI 359


>ref|NP_187126.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75207287|sp|Q9SR01.1|PP212_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g04750, mitochondrial; Flags: Precursor
           gi|6175175|gb|AAF04901.1|AC011437_16 hypothetical
           protein [Arabidopsis thaliana]
           gi|332640610|gb|AEE74131.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 661

 Score =  115 bits (289), Expect = 5e-24
 Identities = 65/133 (48%), Positives = 84/133 (63%)
 Frame = +3

Query: 3   YLQNSLMKMYLYAGDAASARHVFDHMPEQDLVSCNIMLSGLAKEGRCVEALELLRYMEAS 182
           YL NSL+K Y+  G+   A  VF  MP  D+ S N+M+ G AK+G  +EAL+L   M + 
Sbjct: 167 YLWNSLVKFYMELGNFGVAEKVFARMPHPDVSSFNVMIVGYAKQGFSLEALKLYFKMVSD 226

Query: 183 GIELDEYTMVGLLVCCCQLKNARLGKAVHGMIIRKMALSGGSSNSCLILNNALMDLYAKC 362
           GIE DEYT++ LLVCC  L + RLGK VHG I R+    G   +S LIL+NAL+D+Y KC
Sbjct: 227 GIEPDEYTVLSLLVCCGHLSDIRLGKGVHGWIERR----GPVYSSNLILSNALLDMYFKC 282

Query: 363 GELDLAVEVFNKM 401
            E  LA   F+ M
Sbjct: 283 KESGLAKRAFDAM 295



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 44/129 (34%), Positives = 71/129 (55%), Gaps = 2/129 (1%)
 Frame = +3

Query: 12  NSLMKMYLYAGDAASARHVFDHMPEQDLVSCNIMLSGLAKEGRCVEALELLRY--MEASG 185
           N+++  ++  GD  +A+ VFD MP++DLVS N +L G +K+G     +  L Y       
Sbjct: 304 NTMVVGFVRLGDMEAAQAVFDQMPKRDLVSWNSLLFGYSKKGCDQRTVRELFYEMTIVEK 363

Query: 186 IELDEYTMVGLLVCCCQLKNARLGKAVHGMIIRKMALSGGSSNSCLILNNALMDLYAKCG 365
           ++ D  TMV L+           G+ VHG++IR + L G +      L++AL+D+Y KCG
Sbjct: 364 VKPDRVTMVSLISGAANNGELSHGRWVHGLVIR-LQLKGDA-----FLSSALIDMYCKCG 417

Query: 366 ELDLAVEVF 392
            ++ A  VF
Sbjct: 418 IIERAFMVF 426


>ref|XP_006471681.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
           mitochondrial-like [Citrus sinensis]
          Length = 655

 Score =  110 bits (276), Expect = 1e-22
 Identities = 63/133 (47%), Positives = 85/133 (63%)
 Frame = +3

Query: 3   YLQNSLMKMYLYAGDAASARHVFDHMPEQDLVSCNIMLSGLAKEGRCVEALELLRYMEAS 182
           YLQNSLMK+Y+  G    A  +F      D+ S NIM+ G AK+G  +EA+ L   M  S
Sbjct: 163 YLQNSLMKIYIENGQIRLAEKLFLCKQSPDVASFNIMIVGYAKKGCTLEAIRLFYKMMNS 222

Query: 183 GIELDEYTMVGLLVCCCQLKNARLGKAVHGMIIRKMALSGGSSNSCLILNNALMDLYAKC 362
           G+E DE+T +GLLVCC QL + +LGK+VH  + R+  +S  SSN  +IL NAL+D+Y KC
Sbjct: 223 GLEPDEFTALGLLVCCGQLADVQLGKSVHAWMERRKKVS--SSN--MILGNALLDMYVKC 278

Query: 363 GELDLAVEVFNKM 401
            EL LA   F+ +
Sbjct: 279 KELQLARRTFDAL 291



 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 35/130 (26%), Positives = 67/130 (51%)
 Frame = +3

Query: 12  NSLMKMYLYAGDAASARHVFDHMPEQDLVSCNIMLSGLAKEGRCVEALELLRYMEASGIE 191
           N++M      G    A  +F+HMP +D++S N +++G A+ G  V   EL   M    ++
Sbjct: 300 NTIMSGLAKVGQLEYACTLFNHMPNRDIISWNSLIAGYAQNGDYVMMRELFINMILDHVK 359

Query: 192 LDEYTMVGLLVCCCQLKNARLGKAVHGMIIRKMALSGGSSNSCLILNNALMDLYAKCGEL 371
            D  T++ L+    ++     G+ +HG+++R   +          L + L+D+Y KCG +
Sbjct: 360 PDNITLINLVSAAAEVGAIDQGRWIHGVVVRMGTMMDE------FLGSVLIDMYCKCGSI 413

Query: 372 DLAVEVFNKM 401
           + A+ VF ++
Sbjct: 414 ERALTVFREV 423


>ref|XP_006432926.1| hypothetical protein CICLE_v10000494mg [Citrus clementina]
           gi|557535048|gb|ESR46166.1| hypothetical protein
           CICLE_v10000494mg [Citrus clementina]
          Length = 681

 Score =  110 bits (276), Expect = 1e-22
 Identities = 63/133 (47%), Positives = 85/133 (63%)
 Frame = +3

Query: 3   YLQNSLMKMYLYAGDAASARHVFDHMPEQDLVSCNIMLSGLAKEGRCVEALELLRYMEAS 182
           YLQNSLMK+Y+  G    A  +F      D+ S NIM+ G AK+G  +EA+ L   M  S
Sbjct: 163 YLQNSLMKIYIENGQIRLAEKLFLCKQSPDVASFNIMIVGYAKKGCTLEAIRLFYKMMNS 222

Query: 183 GIELDEYTMVGLLVCCCQLKNARLGKAVHGMIIRKMALSGGSSNSCLILNNALMDLYAKC 362
           G+E DE+T +GLLVCC QL + +LGK+VH  + R+  +S  SSN  +IL NAL+D+Y KC
Sbjct: 223 GLEPDEFTALGLLVCCGQLADVQLGKSVHAWMERRKKVS--SSN--MILGNALLDMYVKC 278

Query: 363 GELDLAVEVFNKM 401
            EL LA   F+ +
Sbjct: 279 KELQLARRTFDAL 291



 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 35/130 (26%), Positives = 67/130 (51%)
 Frame = +3

Query: 12  NSLMKMYLYAGDAASARHVFDHMPEQDLVSCNIMLSGLAKEGRCVEALELLRYMEASGIE 191
           N++M      G    A  +F+HMP +D++S N +++G A+ G  V   EL   M    ++
Sbjct: 300 NTIMSGLAKVGQLEYACTLFNHMPNRDIISWNSLIAGYAQNGDYVMMRELFINMILDHVK 359

Query: 192 LDEYTMVGLLVCCCQLKNARLGKAVHGMIIRKMALSGGSSNSCLILNNALMDLYAKCGEL 371
            D  T++ L+    ++     G+ +HG+++R   +          L + L+D+Y KCG +
Sbjct: 360 PDNITLINLVSAAAEVGAIDQGRWIHGVVVRMGTMMDE------FLGSVLIDMYCKCGSI 413

Query: 372 DLAVEVFNKM 401
           + A+ VF ++
Sbjct: 414 ERALTVFREV 423


>ref|XP_004171232.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04750,
           mitochondrial-like [Cucumis sativus]
          Length = 586

 Score =  110 bits (276), Expect = 1e-22
 Identities = 62/131 (47%), Positives = 86/131 (65%)
 Frame = +3

Query: 3   YLQNSLMKMYLYAGDAASARHVFDHMPEQDLVSCNIMLSGLAKEGRCVEALELLRYMEAS 182
           YL+NSL+K Y+  G    AR +FD M ++++VS N M+ G AK G  +  LEL   M + 
Sbjct: 99  YLRNSLIKRYVDNGCFECARQLFDEMSDRNVVSYNTMILGFAKVGNILGILELFHDMRSH 158

Query: 183 GIELDEYTMVGLLVCCCQLKNARLGKAVHGMIIRKMALSGGSSNSCLILNNALMDLYAKC 362
           G+E D++TM+GLL+ C QL   +LGK+VH  I + +    GSSN  LIL NAL+D+Y KC
Sbjct: 159 GLEPDDFTMLGLLLLCGQLGETKLGKSVHAQIEKSI----GSSN--LILYNALLDMYVKC 212

Query: 363 GELDLAVEVFN 395
            EL LA +VF+
Sbjct: 213 NELKLARKVFD 223



 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 37/130 (28%), Positives = 69/130 (53%)
 Frame = +3

Query: 12  NSLMKMYLYAGDAASARHVFDHMPEQDLVSCNIMLSGLAKEGRCVEALELLRYMEASGIE 191
           N+++  Y   G+   A  +F+ +P +D+VS N ++SG A+ G  V    L   M A  ++
Sbjct: 234 NTIIAGYAKVGELELACDLFNQIPTRDIVSWNSLISGYAQNGDYVTVKCLFTRMFAENVK 293

Query: 192 LDEYTMVGLLVCCCQLKNARLGKAVHGMIIRKMALSGGSSNSCLILNNALMDLYAKCGEL 371
            D+ T+V L+    ++     G+ +HG+ ++ +      S S      AL+D+Y KCG +
Sbjct: 294 PDKVTIVNLISAVAEMGALDQGRWIHGLAVKMLTKIEAFSGS------ALIDMYCKCGSI 347

Query: 372 DLAVEVFNKM 401
           + A  +FN++
Sbjct: 348 ERAFVIFNQI 357