BLASTX nr result
ID: Zingiber23_contig00046052
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00046052
(414 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006847522.1| hypothetical protein AMTR_s00014p00090010 [A... 119 3e-25
ref|XP_003611862.1| Pentatricopeptide repeat-containing protein ... 96 6e-18
ref|XP_003516564.2| PREDICTED: pentatricopeptide repeat-containi... 93 3e-17
ref|XP_003619639.1| Pentatricopeptide repeat-containing protein ... 93 3e-17
gb|EPS64702.1| hypothetical protein M569_10080 [Genlisea aurea] 92 5e-17
ref|XP_004514991.1| PREDICTED: pentatricopeptide repeat-containi... 92 9e-17
ref|XP_003612041.1| Pentatricopeptide repeat-containing protein ... 92 9e-17
ref|XP_002524455.1| pentatricopeptide repeat-containing protein,... 91 1e-16
gb|ESW28957.1| hypothetical protein PHAVU_002G032000g [Phaseolus... 90 3e-16
ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat... 90 4e-16
ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containi... 90 4e-16
ref|XP_006356381.1| PREDICTED: pentatricopeptide repeat-containi... 89 5e-16
ref|XP_006348045.1| PREDICTED: pentatricopeptide repeat-containi... 89 5e-16
emb|CBI17453.3| unnamed protein product [Vitis vinifera] 89 5e-16
ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containi... 89 5e-16
ref|XP_004236513.1| PREDICTED: pentatricopeptide repeat-containi... 89 6e-16
ref|XP_002865376.1| pentatricopeptide repeat-containing protein ... 89 6e-16
ref|NP_199236.1| pentatricopeptide repeat-containing protein [Ar... 89 8e-16
ref|XP_006827330.1| hypothetical protein AMTR_s00010p00267800 [A... 88 1e-15
ref|XP_006289662.1| hypothetical protein CARUB_v10003220mg [Caps... 88 1e-15
>ref|XP_006847522.1| hypothetical protein AMTR_s00014p00090010 [Amborella trichopoda]
gi|548850756|gb|ERN09103.1| hypothetical protein
AMTR_s00014p00090010 [Amborella trichopoda]
Length = 845
Score = 119 bits (299), Expect = 3e-25
Identities = 64/147 (43%), Positives = 93/147 (63%), Gaps = 11/147 (7%)
Frame = +2
Query: 5 VKGGLESETPVCSSLITMYGEHRNIGDACSIFDMMVSRDVVSWTAMVAAYISYGNLDAAL 184
+K G E + + + L+TMYGE R + +A +F M DVVSWTAMV+AY++ ++ A
Sbjct: 418 IKMGFEVDISIGNCLVTMYGEQRCMNNAYMVFQSMPRHDVVSWTAMVSAYLTNQRIEEAR 477
Query: 185 DIFDRMPSKNLISWNTMMFGHLQKCR----SLEFNSLNV--MRNP-----PALLFFYRME 331
F+ MP +NLISWNTM+ G+LQ + + S+ V ++P AL FY+ME
Sbjct: 478 QTFESMPQQNLISWNTMISGYLQAGKITVDPMSETSITVTYTKDPLSGAEDALTLFYKME 537
Query: 332 KSSVRANHFSYNCALSVCANIGALEQA 412
+S +R ++F+YNCAL+ CA IGAL QA
Sbjct: 538 QSGIRPDNFTYNCALTACAAIGALHQA 564
Score = 85.9 bits (211), Expect = 5e-15
Identities = 46/135 (34%), Positives = 72/135 (53%)
Frame = +2
Query: 2 VVKGGLESETPVCSSLITMYGEHRNIGDACSIFDMMVSRDVVSWTAMVAAYISYGNLDAA 181
+VK G + V +SLI MY + + DA +F+ + RDV SWTAMV+ Y G +AA
Sbjct: 156 IVKKGFVLDVTVSNSLINMYSKCACMDDAERVFEAITQRDVYSWTAMVSGYAQNGKTEAA 215
Query: 182 LDIFDRMPSKNLISWNTMMFGHLQKCRSLEFNSLNVMRNPPALLFFYRMEKSSVRANHFS 361
+ +F+ MP +N++SWN M+ G+ Q+ ++ AL F +M K + N S
Sbjct: 216 MKLFNEMPQRNVVSWNAMIGGYQQEGDNIS-----------ALAKFVKMLKEREKPNQSS 264
Query: 362 YNCALSVCANIGALE 406
+ L CA + +E
Sbjct: 265 FVSVLKACAGLQTIE 279
Score = 60.1 bits (144), Expect = 3e-07
Identities = 37/135 (27%), Positives = 68/135 (50%)
Frame = +2
Query: 5 VKGGLESETPVCSSLITMYGEHRNIGDACSIFDMMVSRDVVSWTAMVAAYISYGNLDAAL 184
+K GL S T + ++L+ MY + ++ +A +FD M R+ + +AM+A Y + + A
Sbjct: 25 IKAGLNSHTSIETTLVIMYVKCNSLLNASLVFDNMHQRNPIVNSAMIAGYSKHKRFEDAQ 84
Query: 185 DIFDRMPSKNLISWNTMMFGHLQKCRSLEFNSLNVMRNPPALLFFYRMEKSSVRANHFSY 364
FD + +N+ WN M+ + SLN L F ++ S + + F+
Sbjct: 85 KTFDGITERNIKCWNAMISAY----------SLN-QNYHEGLALFRELQASRLDPDEFTV 133
Query: 365 NCALSVCANIGALEQ 409
+ L++ AN+ ALE+
Sbjct: 134 SNVLTISANLNALEE 148
Score = 58.5 bits (140), Expect = 9e-07
Identities = 38/129 (29%), Positives = 64/129 (49%)
Frame = +2
Query: 2 VVKGGLESETPVCSSLITMYGEHRNIGDACSIFDMMVSRDVVSWTAMVAAYISYGNLDAA 181
++K G E++ V +++I M+ + +I A F+ +VVSW+ +V AY G + A
Sbjct: 288 LIKSGTEADAHVGTAIIEMHAKFGDIISAHKSFEAS-EHNVVSWSVLVGAYTQNGYITEA 346
Query: 182 LDIFDRMPSKNLISWNTMMFGHLQKCRSLEFNSLNVMRNPPALLFFYRMEKSSVRANHFS 361
+F MP KN+IS+N M+ ++Q E SL M K+ VR N +
Sbjct: 347 ASLFQEMPKKNVISYNIMVSAYVQNELKTEAFSL-----------LSDMIKAGVRPNEHT 395
Query: 362 YNCALSVCA 388
+ L+ C+
Sbjct: 396 LSSLLNSCS 404
>ref|XP_003611862.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513197|gb|AES94820.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 663
Score = 95.5 bits (236), Expect = 6e-18
Identities = 51/134 (38%), Positives = 83/134 (61%)
Frame = +2
Query: 2 VVKGGLESETPVCSSLITMYGEHRNIGDACSIFDMMVSRDVVSWTAMVAAYISYGNLDAA 181
+V G+E ++ V ++L+ MY + N+ A S+FD M+ +DVVSWT M+ AY ++G +D A
Sbjct: 261 MVVTGIEIDSIVTNALMDMYAKCGNLKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCA 320
Query: 182 LDIFDRMPSKNLISWNTMMFGHLQKCRSLEFNSLNVMRNPPALLFFYRMEKSSVRANHFS 361
L+ F++MP KN++SWN++++ H+Q+ E A+ FYRM S V AN +
Sbjct: 321 LEFFNQMPGKNVVSWNSIIWCHVQEGLYAE-----------AVDLFYRMCDSGVMANDTT 369
Query: 362 YNCALSVCANIGAL 403
LS C+++G L
Sbjct: 370 LVAILSSCSHMGDL 383
>ref|XP_003516564.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 580
Score = 93.2 bits (230), Expect = 3e-17
Identities = 48/136 (35%), Positives = 75/136 (55%)
Frame = +2
Query: 2 VVKGGLESETPVCSSLITMYGEHRNIGDACSIFDMMVSRDVVSWTAMVAAYISYGNLDAA 181
++K G E +SL+ +Y NI A +F+ + +RD+VSW M+ YI +GNLD A
Sbjct: 200 IIKRGFGLEVYATNSLLRVYAISGNIQSAHVLFNQLPTRDIVSWNIMIDGYIKFGNLDMA 259
Query: 182 LDIFDRMPSKNLISWNTMMFGHLQKCRSLEFNSLNVMRNPPALLFFYRMEKSSVRANHFS 361
IF MP KN+ISW TM+ G ++ + + AL +M + ++ + +
Sbjct: 260 YKIFQAMPEKNVISWTTMIVGFVR-----------IGMHKEALSLLQQMLVAGIKPDSIT 308
Query: 362 YNCALSVCANIGALEQ 409
+C+LS CA +GALEQ
Sbjct: 309 LSCSLSACAGLGALEQ 324
>ref|XP_003619639.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494654|gb|AES75857.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 1182
Score = 93.2 bits (230), Expect = 3e-17
Identities = 48/135 (35%), Positives = 81/135 (60%)
Frame = +2
Query: 5 VKGGLESETPVCSSLITMYGEHRNIGDACSIFDMMVSRDVVSWTAMVAAYISYGNLDAAL 184
VK GL+ V ++LI M+G+ + DA ++FD V RD SW M+ AY+ GN+ A
Sbjct: 305 VKVGLDGNVFVVNALIGMFGKWGRVEDARNVFDSAVDRDFYSWNTMIGAYVGSGNMVLAK 364
Query: 185 DIFDRMPSKNLISWNTMMFGHLQKCRSLEFNSLNVMRNPPALLFFYRMEKSSVRANHFSY 364
++FD M ++++SW+T++ G++Q +E AL FF++M +S V+ N ++
Sbjct: 365 ELFDEMHERDVVSWSTIIAGYVQVGCFME-----------ALDFFHKMLQSEVKPNEYTM 413
Query: 365 NCALSVCANIGALEQ 409
AL+ C+N+ AL+Q
Sbjct: 414 VSALAACSNLVALDQ 428
>gb|EPS64702.1| hypothetical protein M569_10080 [Genlisea aurea]
Length = 498
Score = 92.4 bits (228), Expect = 5e-17
Identities = 55/142 (38%), Positives = 86/142 (60%), Gaps = 6/142 (4%)
Frame = +2
Query: 2 VVKGGLESETPVCSSLITMYGEHRNIGDACSIFDMMVSRDVVSWTAMVAAYISYGNLDAA 181
+VK G E+ V + LI +Y E R + DA +FD M +RDVVSW +++A Y+ GNLD+A
Sbjct: 139 LVKFGYETNVFVQNGLIRLYSECRVLEDAWKVFDEMSNRDVVSWNSIIAGYLRSGNLDSA 198
Query: 182 LDIFDRM-PSKNLISWNTMMFGHLQKCRSLEFNSLNVMRNPPALLFFYRM-----EKSSV 343
L +F RM KN+I+WN+++ G +Q R+ E AL FF+ M E ++V
Sbjct: 199 LGLFRRMNQRKNIITWNSVITGLVQCGRAKE-----------ALGFFHEMQVSENENNAV 247
Query: 344 RANHFSYNCALSVCANIGALEQ 409
+ + + A+S CA++GA++Q
Sbjct: 248 KPDKVTVASAISACASLGAIDQ 269
>ref|XP_004514991.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Cicer arietinum]
Length = 690
Score = 91.7 bits (226), Expect = 9e-17
Identities = 47/135 (34%), Positives = 81/135 (60%)
Frame = +2
Query: 5 VKGGLESETPVCSSLITMYGEHRNIGDACSIFDMMVSRDVVSWTAMVAAYISYGNLDAAL 184
VK GLE+ V ++LI MYG+ + D +FD + RD+ SW M+AAY+ G++ A
Sbjct: 210 VKVGLENNVFVVNALIGMYGKWGFLEDGRKVFDSAIDRDLYSWNTMIAAYVGSGDMIQAK 269
Query: 185 DIFDRMPSKNLISWNTMMFGHLQKCRSLEFNSLNVMRNPPALLFFYRMEKSSVRANHFSY 364
++FD M ++ +SW+T++ G++Q +E AL FF++M ++ V+ N ++
Sbjct: 270 ELFDEMQERDFVSWSTIIAGYVQVGCFME-----------ALDFFHKMLQTKVKPNEYTM 318
Query: 365 NCALSVCANIGALEQ 409
AL+ C+N+ AL+Q
Sbjct: 319 VSALAACSNLVALDQ 333
>ref|XP_003612041.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355513376|gb|AES94999.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 518
Score = 91.7 bits (226), Expect = 9e-17
Identities = 48/136 (35%), Positives = 75/136 (55%)
Frame = +2
Query: 2 VVKGGLESETPVCSSLITMYGEHRNIGDACSIFDMMVSRDVVSWTAMVAAYISYGNLDAA 181
++K G SE +SL+ +Y +I A +FD++ SRD+VSW M+ YI GN++ A
Sbjct: 137 IIKRGFGSEVYATNSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMIDGYIKCGNVEMA 196
Query: 182 LDIFDRMPSKNLISWNTMMFGHLQKCRSLEFNSLNVMRNPPALLFFYRMEKSSVRANHFS 361
IF MP KN+ISW +M+ G ++ E AL +M + ++ + +
Sbjct: 197 YKIFQAMPEKNVISWTSMIVGFVRTGMHKE-----------ALCLLQQMLVAGIKPDKIT 245
Query: 362 YNCALSVCANIGALEQ 409
+C+LS CA +GALEQ
Sbjct: 246 LSCSLSACAGLGALEQ 261
>ref|XP_002524455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223536243|gb|EEF37895.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 486
Score = 91.3 bits (225), Expect = 1e-16
Identities = 50/135 (37%), Positives = 81/135 (60%)
Frame = +2
Query: 2 VVKGGLESETPVCSSLITMYGEHRNIGDACSIFDMMVSRDVVSWTAMVAAYISYGNLDAA 181
++K G +++ V +SLITMY ++ +G+A +F+ RDVVS+TA++ Y S G LD A
Sbjct: 150 ILKLGFDNDAFVHTSLITMYVQNGELGNARLVFERSSMRDVVSYTALITGYASRGFLDQA 209
Query: 182 LDIFDRMPSKNLISWNTMMFGHLQKCRSLEFNSLNVMRNPPALLFFYRMEKSSVRANHFS 361
L++FD +P ++++SWN M+ G+ Q R E AL+FF M +++V N +
Sbjct: 210 LELFDEIPVRDVVSWNAMIAGYTQSGRFEE-----------ALIFFEEMLRANVTPNMST 258
Query: 362 YNCALSVCANIGALE 406
LS CA G+L+
Sbjct: 259 LLSVLSACAQSGSLK 273
>gb|ESW28957.1| hypothetical protein PHAVU_002G032000g [Phaseolus vulgaris]
Length = 518
Score = 90.1 bits (222), Expect = 3e-16
Identities = 49/136 (36%), Positives = 73/136 (53%)
Frame = +2
Query: 2 VVKGGLESETPVCSSLITMYGEHRNIGDACSIFDMMVSRDVVSWTAMVAAYISYGNLDAA 181
++K G SE +SL+ Y NI A +F+ + S DVVSW M+ Y +GN+D A
Sbjct: 134 IIKMGFGSEVYAANSLLRAYAISGNIHSAHVLFNQLPSPDVVSWNTMIDGYTKFGNVDMA 193
Query: 182 LDIFDRMPSKNLISWNTMMFGHLQKCRSLEFNSLNVMRNPPALLFFYRMEKSSVRANHFS 361
IF MP+KN+ISW TM+ G ++ E AL +M + ++ + +
Sbjct: 194 YKIFQAMPAKNVISWTTMIVGGVRAGMHKE-----------ALSLLRQMLVAGIKPDSIT 242
Query: 362 YNCALSVCANIGALEQ 409
+C+LS CA +GALEQ
Sbjct: 243 LSCSLSACAGLGALEQ 258
>ref|XP_004156102.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g23330-like [Cucumis sativus]
Length = 642
Score = 89.7 bits (221), Expect = 4e-16
Identities = 53/138 (38%), Positives = 76/138 (55%), Gaps = 2/138 (1%)
Frame = +2
Query: 2 VVKGGLESETPVCSSLITMYGEHRNIGDACSIFDMMVSRDVVSWTAMVAAYISYGNLDAA 181
+++ GL+ + V +SLI +YG+ I DA +FD M RDV SW A++A Y G +DAA
Sbjct: 160 ILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAA 219
Query: 182 LDIFDRMPSKNLISWNTMMFGHLQKCRSLEFNSLNVMRNPPALLFFYRM--EKSSVRANH 355
L IF+RMP +N++SW TM+ G+ Q + + AL F M E S VR N
Sbjct: 220 LAIFERMPWRNIVSWTTMISGYSQSGLAQQ-----------ALSLFDEMVKEDSGVRPNW 268
Query: 356 FSYNCALSVCANIGALEQ 409
+ L CA + LE+
Sbjct: 269 VTIMSVLPACAQLSTLER 286
>ref|XP_004140278.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g20230-like [Cucumis sativus]
Length = 679
Score = 89.7 bits (221), Expect = 4e-16
Identities = 53/138 (38%), Positives = 76/138 (55%), Gaps = 2/138 (1%)
Frame = +2
Query: 2 VVKGGLESETPVCSSLITMYGEHRNIGDACSIFDMMVSRDVVSWTAMVAAYISYGNLDAA 181
+++ GL+ + V +SLI +YG+ I DA +FD M RDV SW A++A Y G +DAA
Sbjct: 197 ILRIGLQFDLYVATSLIILYGKCGEINDAGKVFDNMTIRDVSSWNALLAGYTKSGCIDAA 256
Query: 182 LDIFDRMPSKNLISWNTMMFGHLQKCRSLEFNSLNVMRNPPALLFFYRM--EKSSVRANH 355
L IF+RMP +N++SW TM+ G+ Q + + AL F M E S VR N
Sbjct: 257 LAIFERMPWRNIVSWTTMISGYSQSGLAQQ-----------ALSLFDEMVKEDSGVRPNW 305
Query: 356 FSYNCALSVCANIGALEQ 409
+ L CA + LE+
Sbjct: 306 VTIMSVLPACAQLSTLER 323
>ref|XP_006356381.1| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
mitochondrial-like [Solanum tuberosum]
Length = 689
Score = 89.4 bits (220), Expect = 5e-16
Identities = 42/125 (33%), Positives = 76/125 (60%)
Frame = +2
Query: 32 PVCSSLITMYGEHRNIGDACSIFDMMVSRDVVSWTAMVAAYISYGNLDAALDIFDRMPSK 211
P+C++L+ MY ++ ++ +A ++FD M R VVSWT M++ + +G LD A +F+ MP K
Sbjct: 294 PLCNALMDMYMKNGSLNEAKALFDRMDERTVVSWTIMISGFAKFGCLDEARRLFNEMPEK 353
Query: 212 NLISWNTMMFGHLQKCRSLEFNSLNVMRNPPALLFFYRMEKSSVRANHFSYNCALSVCAN 391
+++ WN ++ G++Q RS E AL+ F M+ +++ + + +LS CA
Sbjct: 354 DIVQWNALIGGYVQAKRSKE-----------ALVLFQEMQTMNIKPDEVTMVSSLSACAQ 402
Query: 392 IGALE 406
+GAL+
Sbjct: 403 LGALD 407
>ref|XP_006348045.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Solanum tuberosum]
Length = 539
Score = 89.4 bits (220), Expect = 5e-16
Identities = 52/139 (37%), Positives = 80/139 (57%), Gaps = 3/139 (2%)
Frame = +2
Query: 2 VVKGGLESETPVCSSLITMYGEHRNIGDACSIFDMMVSRDVVSWTAMVAAYISYGNLDAA 181
VVK G S+ V +SLIT+Y + ++ +A +FD M +RDVVSW AMV + LD A
Sbjct: 142 VVKFGFHSDVFVQNSLITLYSQCGSVENARKVFDEMSNRDVVSWNAMVIGCLRNSELDMA 201
Query: 182 LDIFDRMPSKNLISWNTMMFGHLQKCRSLEFNSLNVMRNPPALLFFYRMEKSS---VRAN 352
L++F R+ +N+++WN+++ G +Q R E AL FFY M+ S V +
Sbjct: 202 LELFRRVKKRNIVTWNSIITGFVQGGRPKE-----------ALEFFYEMQVSGDDMVSPD 250
Query: 353 HFSYNCALSVCANIGALEQ 409
+ LS CA++GA++Q
Sbjct: 251 KLTIASVLSACASLGAVDQ 269
>emb|CBI17453.3| unnamed protein product [Vitis vinifera]
Length = 451
Score = 89.4 bits (220), Expect = 5e-16
Identities = 46/137 (33%), Positives = 78/137 (56%)
Frame = +2
Query: 2 VVKGGLESETPVCSSLITMYGEHRNIGDACSIFDMMVSRDVVSWTAMVAAYISYGNLDAA 181
++ GG S+ V ++LI MY + +G +FD M+ RDV+SWT+++ AY GN++AA
Sbjct: 166 ILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGNMEAA 225
Query: 182 LDIFDRMPSKNLISWNTMMFGHLQKCRSLEFNSLNVMRNPPALLFFYRMEKSSVRANHFS 361
++FD +P K++++W M+ G+ Q R E AL F RM+ + V+ + +
Sbjct: 226 SELFDGLPMKDMVAWTAMVTGYAQNARPRE-----------ALEVFERMQAAGVKTDEVT 274
Query: 362 YNCALSVCANIGALEQA 412
+S CA +GA + A
Sbjct: 275 LVGVISACAQLGAAKYA 291
>ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g44230-like [Vitis vinifera]
Length = 647
Score = 89.4 bits (220), Expect = 5e-16
Identities = 46/137 (33%), Positives = 78/137 (56%)
Frame = +2
Query: 2 VVKGGLESETPVCSSLITMYGEHRNIGDACSIFDMMVSRDVVSWTAMVAAYISYGNLDAA 181
++ GG S+ V ++LI MY + +G +FD M+ RDV+SWT+++ AY GN++AA
Sbjct: 166 ILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGNMEAA 225
Query: 182 LDIFDRMPSKNLISWNTMMFGHLQKCRSLEFNSLNVMRNPPALLFFYRMEKSSVRANHFS 361
++FD +P K++++W M+ G+ Q R E AL F RM+ + V+ + +
Sbjct: 226 SELFDGLPMKDMVAWTAMVTGYAQNARPRE-----------ALEVFERMQAAGVKTDEVT 274
Query: 362 YNCALSVCANIGALEQA 412
+S CA +GA + A
Sbjct: 275 LVGVISACAQLGAAKYA 291
>ref|XP_004236513.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Solanum lycopersicum]
Length = 618
Score = 89.0 bits (219), Expect = 6e-16
Identities = 53/139 (38%), Positives = 73/139 (52%), Gaps = 3/139 (2%)
Frame = +2
Query: 2 VVKGGLESETPVCSSLITMYGEHRNIGDACSIFDMMVSRDVVSWTAMVAAYISYGNLDAA 181
VV+ GLES V +SLI MY + DA +FD + RDV SWT+++ Y + G + A
Sbjct: 171 VVRNGLESNLYVGNSLINMYSVFKITDDAYKVFDRIADRDVFSWTSLICGYANNGEMYQA 230
Query: 182 LDIFDRMPSKNLISWNTMMFGHLQKCRSLEFNSLNVMRNPPALLFFYRM---EKSSVRAN 352
+IF +MP +N +SW ++ G R +E LL+ M + VR N
Sbjct: 231 CEIFYKMPVRNDVSWAVIISGFAGNGRYME-----------VLLYLNEMLGSVEDKVRPN 279
Query: 353 HFSYNCALSVCANIGALEQ 409
CALS CAN+GALEQ
Sbjct: 280 EAVLVCALSACANLGALEQ 298
>ref|XP_002865376.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297311211|gb|EFH41635.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 658
Score = 89.0 bits (219), Expect = 6e-16
Identities = 46/126 (36%), Positives = 75/126 (59%)
Frame = +2
Query: 35 VCSSLITMYGEHRNIGDACSIFDMMVSRDVVSWTAMVAAYISYGNLDAALDIFDRMPSKN 214
V +++I MY + +I A +FD M RDV+SWT ++AAY GN+++A D+F+ +P+K+
Sbjct: 187 VGNTMIDMYVKCGSIVCARKVFDEMPERDVISWTELIAAYARVGNMESAADLFESLPTKD 246
Query: 215 LISWNTMMFGHLQKCRSLEFNSLNVMRNPPALLFFYRMEKSSVRANHFSYNCALSVCANI 394
+++W M+ G Q + E AL +F RMEKS +RA+ + +S CA +
Sbjct: 247 MVAWTAMVTGFAQNAKPQE-----------ALEYFDRMEKSGIRADEVTVAGYISACAQL 295
Query: 395 GALEQA 412
GA + A
Sbjct: 296 GASKYA 301
>ref|NP_199236.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170229|sp|Q9FFG8.1|PP417_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g44230 gi|9759524|dbj|BAB10990.1| selenium-binding
protein-like [Arabidopsis thaliana]
gi|91806984|gb|ABE66219.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
gi|332007694|gb|AED95077.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 657
Score = 88.6 bits (218), Expect = 8e-16
Identities = 45/126 (35%), Positives = 74/126 (58%)
Frame = +2
Query: 35 VCSSLITMYGEHRNIGDACSIFDMMVSRDVVSWTAMVAAYISYGNLDAALDIFDRMPSKN 214
V +++I MY + +I A +FD M RDV+SWT ++AAY GN++ A ++F+ +P+K+
Sbjct: 186 VGNTMIDMYVKCESIDCARKVFDEMPERDVISWTELIAAYARVGNMECAAELFESLPTKD 245
Query: 215 LISWNTMMFGHLQKCRSLEFNSLNVMRNPPALLFFYRMEKSSVRANHFSYNCALSVCANI 394
+++W M+ G Q + E AL +F RMEKS +RA+ + +S CA +
Sbjct: 246 MVAWTAMVTGFAQNAKPQE-----------ALEYFDRMEKSGIRADEVTVAGYISACAQL 294
Query: 395 GALEQA 412
GA + A
Sbjct: 295 GASKYA 300
>ref|XP_006827330.1| hypothetical protein AMTR_s00010p00267800 [Amborella trichopoda]
gi|548831759|gb|ERM94567.1| hypothetical protein
AMTR_s00010p00267800 [Amborella trichopoda]
Length = 659
Score = 88.2 bits (217), Expect = 1e-15
Identities = 53/136 (38%), Positives = 74/136 (54%), Gaps = 1/136 (0%)
Frame = +2
Query: 2 VVKGGLESETP-VCSSLITMYGEHRNIGDACSIFDMMVSRDVVSWTAMVAAYISYGNLDA 178
V+ GL S + V ++LI MY + DA IFD M+ R+VVSW AM+AAY G LD
Sbjct: 477 VIHNGLASSSVFVQTNLINMYATGGELEDARHIFDGMLERNVVSWNAMLAAYARSGGLDE 536
Query: 179 ALDIFDRMPSKNLISWNTMMFGHLQKCRSLEFNSLNVMRNPPALLFFYRMEKSSVRANHF 358
A +FD MP +N++SW TM+ G Q S + AL F +M+ + + A+
Sbjct: 537 AWRLFDEMPERNVVSWTTMIAGCSQTGHSRQ-----------ALALFRQMQHAHIEADQV 585
Query: 359 SYNCALSVCANIGALE 406
LS CA +GAL+
Sbjct: 586 VMVSVLSACAELGALD 601
Score = 65.5 bits (158), Expect = 7e-09
Identities = 36/124 (29%), Positives = 65/124 (52%)
Frame = +2
Query: 35 VCSSLITMYGEHRNIGDACSIFDMMVSRDVVSWTAMVAAYISYGNLDAALDIFDRMPSKN 214
V + LI Y + A +F+ + RDVVSW+++V Y+ +LD+A ++F MP ++
Sbjct: 150 VQNPLIHFYSVSGYLDCARQVFNEVTRRDVVSWSSLVVGYVRNRDLDSAKELFLEMPERD 209
Query: 215 LISWNTMMFGHLQKCRSLEFNSLNVMRNPPALLFFYRMEKSSVRANHFSYNCALSVCANI 394
++SW ++ G+ Q + E AL F +M+ + V+ + + +S CA +
Sbjct: 210 VVSWTALIAGYAQNKQPKE-----------ALELFQQMQVAGVKPDEVTLISVISACAQL 258
Query: 395 GALE 406
G LE
Sbjct: 259 GDLE 262
>ref|XP_006289662.1| hypothetical protein CARUB_v10003220mg [Capsella rubella]
gi|482558368|gb|EOA22560.1| hypothetical protein
CARUB_v10003220mg [Capsella rubella]
Length = 511
Score = 88.2 bits (217), Expect = 1e-15
Identities = 51/134 (38%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
Frame = +2
Query: 8 KGGLESETPVCSSLITMYGEHRNIGDACSIFDMMVSRDVVSWTAMVAAYISYGNLDAALD 187
K G ES++ C++LIT Y + + A +FD M +RD W M+ Y G++ AA++
Sbjct: 110 KSGFESDSFCCTALITAYAKLGELCCARRVFDEMSNRDAPVWNTMITGYQRQGDMKAAME 169
Query: 188 IFDRMPSKNLISWNTMMFGHLQKCRSLEFNSLNVMRNPPALLFFYRMEK-SSVRANHFSY 364
+FD MP KN+ISW T++ G Q E AL F MEK SV+ NH +
Sbjct: 170 LFDSMPCKNVISWTTVISGFSQNGNYSE-----------ALTMFLCMEKDKSVKPNHVTL 218
Query: 365 NCALSVCANIGALE 406
L CAN+G LE
Sbjct: 219 VSVLPACANLGELE 232