BLASTX nr result
ID: Zingiber23_contig00045996
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00045996
(266 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003575376.1| PREDICTED: pentatricopeptide repeat-containi... 85 1e-14
gb|EOY02331.1| Pentatricopeptide repeat (PPR) superfamily protei... 84 2e-14
ref|NP_001047457.1| Os02g0620800 [Oryza sativa Japonica Group] g... 83 3e-14
gb|EEE57391.1| hypothetical protein OsJ_07563 [Oryza sativa Japo... 83 3e-14
ref|XP_006647529.1| PREDICTED: pentatricopeptide repeat-containi... 82 6e-14
gb|EMJ02163.1| hypothetical protein PRUPE_ppa004156mg [Prunus pe... 81 2e-13
ref|XP_004955088.1| PREDICTED: pentatricopeptide repeat-containi... 80 4e-13
ref|XP_002264078.2| PREDICTED: pentatricopeptide repeat-containi... 79 5e-13
ref|XP_006478286.1| PREDICTED: pentatricopeptide repeat-containi... 79 6e-13
ref|XP_006441856.1| hypothetical protein CICLE_v10019688mg [Citr... 79 6e-13
ref|XP_002454184.1| hypothetical protein SORBIDRAFT_04g026300 [S... 79 6e-13
ref|XP_002529628.1| pentatricopeptide repeat-containing protein,... 79 8e-13
ref|XP_006376104.1| hypothetical protein POPTR_0013s09580g [Popu... 78 1e-12
ref|XP_006344596.1| PREDICTED: pentatricopeptide repeat-containi... 77 2e-12
ref|XP_004141609.1| PREDICTED: pentatricopeptide repeat-containi... 77 2e-12
ref|XP_004301257.1| PREDICTED: pentatricopeptide repeat-containi... 77 3e-12
gb|EMT30877.1| hypothetical protein F775_27182 [Aegilops tauschii] 76 5e-12
gb|AFW72379.1| hypothetical protein ZEAMMB73_412000 [Zea mays] 76 5e-12
ref|XP_002302000.2| pentatricopeptide repeat-containing family p... 75 7e-12
gb|EMJ17324.1| hypothetical protein PRUPE_ppa018932mg [Prunus pe... 74 2e-11
>ref|XP_003575376.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Brachypodium distachyon]
Length = 523
Score = 84.7 bits (208), Expect = 1e-14
Identities = 40/74 (54%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Frame = -1
Query: 221 PKSVDYGFMLTNLYSECGKCGDVGKVRKRLNQ-LGGKKLPGCSWIEVEKRVRQFYSGDTI 45
P + +Y ML NLYSE G +V K+RK + + + GKKLPGCSWIEV+++ +FYSGD
Sbjct: 444 PNNANYVVMLANLYSEGGSWEEVTKIRKLMKEDIMGKKLPGCSWIEVDRKTHRFYSGDDA 503
Query: 44 HPEVGQIYEILDEL 3
HPE IY+ LDEL
Sbjct: 504 HPESEDIYDTLDEL 517
>gb|EOY02331.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
cacao]
Length = 527
Score = 84.0 bits (206), Expect = 2e-14
Identities = 38/73 (52%), Positives = 48/73 (65%)
Frame = -1
Query: 221 PKSVDYGFMLTNLYSECGKCGDVGKVRKRLNQLGGKKLPGCSWIEVEKRVRQFYSGDTIH 42
P + YG ML NLY E GK +V KVRK+L + K+PGCSWIEV+ +V QFYS D H
Sbjct: 451 PNNGGYGVMLANLYGELGKWDEVRKVRKKLKEQNSYKIPGCSWIEVDSQVHQFYSVDKTH 510
Query: 41 PEVGQIYEILDEL 3
P +IY IL+ +
Sbjct: 511 PRTDEIYNILESV 523
>ref|NP_001047457.1| Os02g0620800 [Oryza sativa Japonica Group]
gi|47847758|dbj|BAD21535.1| putative pentatricopeptide
(PPR) repeat-containing protein [Oryza sativa Japonica
Group] gi|47847799|dbj|BAD21575.1| putative
pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group] gi|113536988|dbj|BAF09371.1|
Os02g0620800 [Oryza sativa Japonica Group]
Length = 530
Score = 83.2 bits (204), Expect = 3e-14
Identities = 41/74 (55%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Frame = -1
Query: 221 PKSVDYGFMLTNLYSECGKCGDVGKVRKRLNQ-LGGKKLPGCSWIEVEKRVRQFYSGDTI 45
P + +Y ML NLYSE G +V KVRK + + + GKKLPGCSWIEV+++ R+FYSGD
Sbjct: 446 PSNANYVVMLANLYSEGGFWEEVRKVRKLMKEDVTGKKLPGCSWIEVDRKTRRFYSGDDG 505
Query: 44 HPEVGQIYEILDEL 3
HPE IY+ LD+L
Sbjct: 506 HPESEDIYDTLDKL 519
>gb|EEE57391.1| hypothetical protein OsJ_07563 [Oryza sativa Japonica Group]
Length = 748
Score = 83.2 bits (204), Expect = 3e-14
Identities = 41/74 (55%), Positives = 53/74 (71%), Gaps = 1/74 (1%)
Frame = -1
Query: 221 PKSVDYGFMLTNLYSECGKCGDVGKVRKRLNQ-LGGKKLPGCSWIEVEKRVRQFYSGDTI 45
P + +Y ML NLYSE G +V KVRK + + + GKKLPGCSWIEV+++ R+FYSGD
Sbjct: 664 PSNANYVVMLANLYSEGGFWEEVRKVRKLMKEDVTGKKLPGCSWIEVDRKTRRFYSGDDG 723
Query: 44 HPEVGQIYEILDEL 3
HPE IY+ LD+L
Sbjct: 724 HPESEDIYDTLDKL 737
>ref|XP_006647529.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Oryza brachyantha]
Length = 530
Score = 82.4 bits (202), Expect = 6e-14
Identities = 42/74 (56%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Frame = -1
Query: 221 PKSVDYGFMLTNLYSECGKCGDVGKVRKRLNQ-LGGKKLPGCSWIEVEKRVRQFYSGDTI 45
P + +Y ML NLYSE G +V KVRK + + + GKKLPGCSWIEV +R +FYSGD
Sbjct: 446 PNNANYVVMLANLYSEGGFWEEVRKVRKLMKEDVTGKKLPGCSWIEVNRRTHRFYSGDDG 505
Query: 44 HPEVGQIYEILDEL 3
HPE IY LDEL
Sbjct: 506 HPESEDIYSTLDEL 519
>gb|EMJ02163.1| hypothetical protein PRUPE_ppa004156mg [Prunus persica]
Length = 526
Score = 80.9 bits (198), Expect = 2e-13
Identities = 38/73 (52%), Positives = 46/73 (63%)
Frame = -1
Query: 221 PKSVDYGFMLTNLYSECGKCGDVGKVRKRLNQLGGKKLPGCSWIEVEKRVRQFYSGDTIH 42
P + YG ML N+Y + GK D KVRK L + K PGCSWIEV+ +V QFYS D H
Sbjct: 443 PNNGGYGIMLANIYGQLGKWDDARKVRKVLRERNAYKTPGCSWIEVDNQVYQFYSVDKSH 502
Query: 41 PEVGQIYEILDEL 3
P +IY+ILD L
Sbjct: 503 PRTEEIYQILDTL 515
>ref|XP_004955088.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Setaria italica]
Length = 530
Score = 79.7 bits (195), Expect = 4e-13
Identities = 38/74 (51%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Frame = -1
Query: 221 PKSVDYGFMLTNLYSECGKCGDVGKVRKRLNQLG-GKKLPGCSWIEVEKRVRQFYSGDTI 45
P + +Y ML N+YSE G +V KVRK + + GKKLPGCSWIEV++++ +FYSGD
Sbjct: 451 PNNANYVVMLANVYSEGGLWEEVRKVRKFVKEETIGKKLPGCSWIEVDRKIHRFYSGDDA 510
Query: 44 HPEVGQIYEILDEL 3
HP+ IY+ LD+L
Sbjct: 511 HPQSEDIYDTLDDL 524
>ref|XP_002264078.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Vitis vinifera]
Length = 573
Score = 79.3 bits (194), Expect = 5e-13
Identities = 36/73 (49%), Positives = 45/73 (61%)
Frame = -1
Query: 221 PKSVDYGFMLTNLYSECGKCGDVGKVRKRLNQLGGKKLPGCSWIEVEKRVRQFYSGDTIH 42
P + YG ML N+Y E GK +V KVRK L + K PGCSWIE++ +V QFYS D H
Sbjct: 497 PNNGGYGIMLANIYGELGKWDEVRKVRKVLKEQNAHKTPGCSWIEIDNQVHQFYSVDKTH 556
Query: 41 PEVGQIYEILDEL 3
P +IY L+ L
Sbjct: 557 PRTEEIYNTLESL 569
>ref|XP_006478286.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Citrus sinensis]
Length = 529
Score = 79.0 bits (193), Expect = 6e-13
Identities = 36/73 (49%), Positives = 46/73 (63%)
Frame = -1
Query: 221 PKSVDYGFMLTNLYSECGKCGDVGKVRKRLNQLGGKKLPGCSWIEVEKRVRQFYSGDTIH 42
P + YG ML N+Y E GK +V KVRK L K PGCSWIEV+K+V QF+S D H
Sbjct: 453 PNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTH 512
Query: 41 PEVGQIYEILDEL 3
P +IY+ L+ +
Sbjct: 513 PRTEEIYDALESM 525
>ref|XP_006441856.1| hypothetical protein CICLE_v10019688mg [Citrus clementina]
gi|557544118|gb|ESR55096.1| hypothetical protein
CICLE_v10019688mg [Citrus clementina]
Length = 529
Score = 79.0 bits (193), Expect = 6e-13
Identities = 36/73 (49%), Positives = 46/73 (63%)
Frame = -1
Query: 221 PKSVDYGFMLTNLYSECGKCGDVGKVRKRLNQLGGKKLPGCSWIEVEKRVRQFYSGDTIH 42
P + YG ML N+Y E GK +V KVRK L K PGCSWIEV+K+V QF+S D H
Sbjct: 453 PNNGGYGIMLANIYGELGKWDEVRKVRKMLKDRNAYKTPGCSWIEVDKQVHQFHSLDKTH 512
Query: 41 PEVGQIYEILDEL 3
P +IY+ L+ +
Sbjct: 513 PRTEEIYDALESM 525
>ref|XP_002454184.1| hypothetical protein SORBIDRAFT_04g026300 [Sorghum bicolor]
gi|241934015|gb|EES07160.1| hypothetical protein
SORBIDRAFT_04g026300 [Sorghum bicolor]
Length = 530
Score = 79.0 bits (193), Expect = 6e-13
Identities = 38/74 (51%), Positives = 51/74 (68%), Gaps = 1/74 (1%)
Frame = -1
Query: 221 PKSVDYGFMLTNLYSECGKCGDVGKVRKRLNQLG-GKKLPGCSWIEVEKRVRQFYSGDTI 45
P + +Y ML N+YSE G +V KVRK + + GKKLPGCSWIEV+++ +FYSGD
Sbjct: 451 PNNANYVVMLANVYSEGGLWEEVRKVRKFVKEENIGKKLPGCSWIEVDRKTHRFYSGDDA 510
Query: 44 HPEVGQIYEILDEL 3
HPE IY+ L++L
Sbjct: 511 HPESENIYDTLEDL 524
>ref|XP_002529628.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223530913|gb|EEF32773.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 400
Score = 78.6 bits (192), Expect = 8e-13
Identities = 39/73 (53%), Positives = 44/73 (60%)
Frame = -1
Query: 221 PKSVDYGFMLTNLYSECGKCGDVGKVRKRLNQLGGKKLPGCSWIEVEKRVRQFYSGDTIH 42
PK+ YG ML NLY GK +V KVRK L K PGCSWIEV+ V QFYS D H
Sbjct: 323 PKNGGYGIMLANLYGGLGKWDEVRKVRKMLKDHNAYKTPGCSWIEVDNEVCQFYSVDKTH 382
Query: 41 PEVGQIYEILDEL 3
P +IY IL+ L
Sbjct: 383 PRSEEIYRILENL 395
>ref|XP_006376104.1| hypothetical protein POPTR_0013s09580g [Populus trichocarpa]
gi|550325368|gb|ERP53901.1| hypothetical protein
POPTR_0013s09580g [Populus trichocarpa]
Length = 525
Score = 78.2 bits (191), Expect = 1e-12
Identities = 36/73 (49%), Positives = 47/73 (64%)
Frame = -1
Query: 221 PKSVDYGFMLTNLYSECGKCGDVGKVRKRLNQLGGKKLPGCSWIEVEKRVRQFYSGDTIH 42
P + YG L N+Y + GK DV +VRK L +L K PGCSWIEV+ +V QF+S D H
Sbjct: 449 PNNGGYGITLANVYGKLGKWDDVRRVRKMLKELNVPKTPGCSWIEVDNKVSQFHSVDKSH 508
Query: 41 PEVGQIYEILDEL 3
P +IY+IL+ L
Sbjct: 509 PRAEEIYQILENL 521
>ref|XP_006344596.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Solanum tuberosum]
Length = 528
Score = 77.4 bits (189), Expect = 2e-12
Identities = 37/71 (52%), Positives = 45/71 (63%)
Frame = -1
Query: 221 PKSVDYGFMLTNLYSECGKCGDVGKVRKRLNQLGGKKLPGCSWIEVEKRVRQFYSGDTIH 42
P + Y ML NLY E GK + KVRK LNQ K PGCSWIE++ +V QFYS D H
Sbjct: 450 PNNGSYYSMLANLYGELGKWDEARKVRKILNQQNAYKAPGCSWIELDSQVHQFYSVDKSH 509
Query: 41 PEVGQIYEILD 9
P + +IY IL+
Sbjct: 510 PRMEEIYSILE 520
>ref|XP_004141609.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g33350-like [Cucumis sativus]
gi|449510706|ref|XP_004163739.1| PREDICTED:
pentatricopeptide repeat-containing protein
At1g33350-like [Cucumis sativus]
Length = 563
Score = 77.4 bits (189), Expect = 2e-12
Identities = 36/73 (49%), Positives = 48/73 (65%)
Frame = -1
Query: 221 PKSVDYGFMLTNLYSECGKCGDVGKVRKRLNQLGGKKLPGCSWIEVEKRVRQFYSGDTIH 42
PK+ Y ML N+Y+E GK +V KVR+ L + K PGCSWIEV+ +V QFYS D H
Sbjct: 487 PKNGGYRIMLANIYAEFGKWDEVRKVRRLLKEKNAYKTPGCSWIEVDNQVYQFYSFDMSH 546
Query: 41 PEVGQIYEILDEL 3
P V +IY+ L+ +
Sbjct: 547 PSVEEIYKTLESM 559
>ref|XP_004301257.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g02750-like [Fragaria vesca subsp. vesca]
Length = 780
Score = 76.6 bits (187), Expect = 3e-12
Identities = 32/74 (43%), Positives = 51/74 (68%)
Frame = -1
Query: 224 KPKSVDYGFMLTNLYSECGKCGDVGKVRKRLNQLGGKKLPGCSWIEVEKRVRQFYSGDTI 45
+P++ +L+NLY+ G+ GDVGK+R ++ +G +K+PG SWIEV+ ++ F GD++
Sbjct: 607 EPENAGMYVLLSNLYASSGRWGDVGKMRLKMRDIGVRKVPGYSWIEVQNKIHTFSVGDSV 666
Query: 44 HPEVGQIYEILDEL 3
HPE IY L+EL
Sbjct: 667 HPEKDNIYAFLEEL 680
>gb|EMT30877.1| hypothetical protein F775_27182 [Aegilops tauschii]
Length = 363
Score = 75.9 bits (185), Expect = 5e-12
Identities = 38/73 (52%), Positives = 46/73 (63%)
Frame = -1
Query: 221 PKSVDYGFMLTNLYSECGKCGDVGKVRKRLNQLGGKKLPGCSWIEVEKRVRQFYSGDTIH 42
P +V+Y ML NLYSE G V KVRK + + GKK+PGCSWIEV+++ FYSGD H
Sbjct: 282 PNNVNYVVMLANLYSEGGSWEQVMKVRKLMQEDMGKKVPGCSWIEVDRKTHMFYSGDDTH 341
Query: 41 PEVGQIYEILDEL 3
P I L EL
Sbjct: 342 PVSEDICNTLVEL 354
>gb|AFW72379.1| hypothetical protein ZEAMMB73_412000 [Zea mays]
Length = 471
Score = 75.9 bits (185), Expect = 5e-12
Identities = 36/74 (48%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Frame = -1
Query: 221 PKSVDYGFMLTNLYSECGKCGDVGKVRKRLNQLG-GKKLPGCSWIEVEKRVRQFYSGDTI 45
P + +Y ML N+YSE G +V K RK + + GKKLPGCSWIEV++++ +FYSGD
Sbjct: 392 PNNANYVVMLANVYSEGGLWEEVRKARKFMEEENIGKKLPGCSWIEVDRKIHRFYSGDDA 451
Query: 44 HPEVGQIYEILDEL 3
H E IY+ L++L
Sbjct: 452 HSESENIYDTLEDL 465
>ref|XP_002302000.2| pentatricopeptide repeat-containing family protein [Populus
trichocarpa] gi|550344162|gb|EEE81273.2|
pentatricopeptide repeat-containing family protein
[Populus trichocarpa]
Length = 797
Score = 75.5 bits (184), Expect = 7e-12
Identities = 36/74 (48%), Positives = 47/74 (63%)
Frame = -1
Query: 224 KPKSVDYGFMLTNLYSECGKCGDVGKVRKRLNQLGGKKLPGCSWIEVEKRVRQFYSGDTI 45
KP+ +L+N+Y+ G+ D+ KVRK + G KK PGCSWIEVE +V F GD
Sbjct: 624 KPQHDGTYVLLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWIEVENKVHSFLVGDAN 683
Query: 44 HPEVGQIYEILDEL 3
HPEV QIY L++L
Sbjct: 684 HPEVRQIYNYLEQL 697
>gb|EMJ17324.1| hypothetical protein PRUPE_ppa018932mg [Prunus persica]
Length = 689
Score = 73.9 bits (180), Expect = 2e-11
Identities = 33/65 (50%), Positives = 45/65 (69%)
Frame = -1
Query: 197 MLTNLYSECGKCGDVGKVRKRLNQLGGKKLPGCSWIEVEKRVRQFYSGDTIHPEVGQIYE 18
+L+NLY+ G+ DV KVR+ + G KK PGCSWI+VE V F GDT+HPEV +Y+
Sbjct: 525 LLSNLYAAIGRWDDVAKVRQLMRDRGVKKEPGCSWIDVENMVHVFLVGDTVHPEVQAVYK 584
Query: 17 ILDEL 3
L++L
Sbjct: 585 YLEQL 589