BLASTX nr result
ID: Zingiber23_contig00045372
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00045372
(197 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006366498.1| PREDICTED: probable DNA-directed RNA polymer... 125 4e-27
gb|EOY19647.1| Nuclear RNA polymerase A2 isoform 2 [Theobroma ca... 125 4e-27
gb|EOY19646.1| DNA-directed RNA polymerase isoform 1 [Theobroma ... 125 4e-27
ref|XP_004307166.1| PREDICTED: DNA-directed RNA polymerase I sub... 125 4e-27
ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I sub... 125 4e-27
ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I sub... 125 4e-27
emb|CBI35100.3| unnamed protein product [Vitis vinifera] 125 4e-27
ref|XP_006306612.1| hypothetical protein CARUB_v10008127mg [Caps... 125 8e-27
gb|AAG10602.1|AC008030_2 Similar to DNA-directed RNA polymerase ... 125 8e-27
gb|AAG52049.1|AC022455_3 DNA-directed RNA polymerase subunit, pu... 125 8e-27
ref|NP_564341.2| nuclear RNA polymerase A2 [Arabidopsis thaliana... 125 8e-27
dbj|BAF01996.1| putative DNA-directed RNA polymerase subunit [Ar... 125 8e-27
ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymer... 124 1e-26
ref|XP_006428126.1| hypothetical protein CICLE_v10024768mg [Citr... 124 1e-26
ref|XP_004300118.1| PREDICTED: DNA-directed RNA polymerase I sub... 124 1e-26
gb|EMJ26191.1| hypothetical protein PRUPE_ppa020507mg [Prunus pe... 124 1e-26
ref|XP_002893589.1| hypothetical protein ARALYDRAFT_313639 [Arab... 123 2e-26
gb|EXC31692.1| putative DNA-directed RNA polymerase I subunit RP... 123 3e-26
ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putat... 122 4e-26
ref|XP_004486057.1| PREDICTED: probable DNA-directed RNA polymer... 122 6e-26
>ref|XP_006366498.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
[Solanum tuberosum]
Length = 1179
Score = 125 bits (315), Expect = 4e-27
Identities = 59/65 (90%), Positives = 61/65 (93%)
Frame = +3
Query: 3 HGQKGVCSQLWPSEDMPFSEVTGMQPDLIINSHAFPSRMTIAMLLESIAAKGGSLHGKFV 182
HGQKGVCSQLWP DMPFS VTGM+PDLIIN HAFPSRMTIAMLLESIAAKGG+LHGKFV
Sbjct: 911 HGQKGVCSQLWPDVDMPFSAVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGKFV 970
Query: 183 DATPF 197
DATPF
Sbjct: 971 DATPF 975
>gb|EOY19647.1| Nuclear RNA polymerase A2 isoform 2 [Theobroma cacao]
Length = 1180
Score = 125 bits (315), Expect = 4e-27
Identities = 59/65 (90%), Positives = 61/65 (93%)
Frame = +3
Query: 3 HGQKGVCSQLWPSEDMPFSEVTGMQPDLIINSHAFPSRMTIAMLLESIAAKGGSLHGKFV 182
HGQKGVCSQLWP DMPFS VTGM+PDLIIN HAFPSRMTIAMLLES+AAKGGSLHGKFV
Sbjct: 908 HGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFV 967
Query: 183 DATPF 197
DATPF
Sbjct: 968 DATPF 972
>gb|EOY19646.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
Length = 1074
Score = 125 bits (315), Expect = 4e-27
Identities = 59/65 (90%), Positives = 61/65 (93%)
Frame = +3
Query: 3 HGQKGVCSQLWPSEDMPFSEVTGMQPDLIINSHAFPSRMTIAMLLESIAAKGGSLHGKFV 182
HGQKGVCSQLWP DMPFS VTGM+PDLIIN HAFPSRMTIAMLLES+AAKGGSLHGKFV
Sbjct: 781 HGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFV 840
Query: 183 DATPF 197
DATPF
Sbjct: 841 DATPF 845
>ref|XP_004307166.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Fragaria
vesca subsp. vesca]
Length = 1169
Score = 125 bits (315), Expect = 4e-27
Identities = 59/65 (90%), Positives = 61/65 (93%)
Frame = +3
Query: 3 HGQKGVCSQLWPSEDMPFSEVTGMQPDLIINSHAFPSRMTIAMLLESIAAKGGSLHGKFV 182
HGQKGVCSQLWP DMPFS VTGM+PDLIIN HAFPSRMTIAMLLES+AAKGGSLHGKFV
Sbjct: 897 HGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFV 956
Query: 183 DATPF 197
DATPF
Sbjct: 957 DATPF 961
>ref|XP_004229596.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Solanum
lycopersicum]
Length = 1184
Score = 125 bits (315), Expect = 4e-27
Identities = 59/65 (90%), Positives = 61/65 (93%)
Frame = +3
Query: 3 HGQKGVCSQLWPSEDMPFSEVTGMQPDLIINSHAFPSRMTIAMLLESIAAKGGSLHGKFV 182
HGQKGVCSQLWP DMPFS VTGM+PDLIIN HAFPSRMTIAMLLESIAAKGG+LHGKFV
Sbjct: 916 HGQKGVCSQLWPDVDMPFSAVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGALHGKFV 975
Query: 183 DATPF 197
DATPF
Sbjct: 976 DATPF 980
>ref|XP_002263835.2| PREDICTED: DNA-directed RNA polymerase I subunit RPA2 [Vitis
vinifera]
Length = 1142
Score = 125 bits (315), Expect = 4e-27
Identities = 59/65 (90%), Positives = 61/65 (93%)
Frame = +3
Query: 3 HGQKGVCSQLWPSEDMPFSEVTGMQPDLIINSHAFPSRMTIAMLLESIAAKGGSLHGKFV 182
HGQKGVCSQLWP DMPFS VTGM+PDLIIN HAFPSRMTIAMLLES+AAKGGSLHGKFV
Sbjct: 870 HGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFV 929
Query: 183 DATPF 197
DATPF
Sbjct: 930 DATPF 934
>emb|CBI35100.3| unnamed protein product [Vitis vinifera]
Length = 1113
Score = 125 bits (315), Expect = 4e-27
Identities = 59/65 (90%), Positives = 61/65 (93%)
Frame = +3
Query: 3 HGQKGVCSQLWPSEDMPFSEVTGMQPDLIINSHAFPSRMTIAMLLESIAAKGGSLHGKFV 182
HGQKGVCSQLWP DMPFS VTGM+PDLIIN HAFPSRMTIAMLLES+AAKGGSLHGKFV
Sbjct: 863 HGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFV 922
Query: 183 DATPF 197
DATPF
Sbjct: 923 DATPF 927
>ref|XP_006306612.1| hypothetical protein CARUB_v10008127mg [Capsella rubella]
gi|482575323|gb|EOA39510.1| hypothetical protein
CARUB_v10008127mg [Capsella rubella]
Length = 1171
Score = 125 bits (313), Expect = 8e-27
Identities = 59/65 (90%), Positives = 61/65 (93%)
Frame = +3
Query: 3 HGQKGVCSQLWPSEDMPFSEVTGMQPDLIINSHAFPSRMTIAMLLESIAAKGGSLHGKFV 182
HGQKGVCSQLWP DMPF+ VTGM+PDLIIN HAFPSRMTIAMLLESIAAKGGSLHGKFV
Sbjct: 891 HGQKGVCSQLWPDIDMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHGKFV 950
Query: 183 DATPF 197
DATPF
Sbjct: 951 DATPF 955
>gb|AAG10602.1|AC008030_2 Similar to DNA-directed RNA polymerase subunit [Arabidopsis thaliana]
Length = 1233
Score = 125 bits (313), Expect = 8e-27
Identities = 59/65 (90%), Positives = 61/65 (93%)
Frame = +3
Query: 3 HGQKGVCSQLWPSEDMPFSEVTGMQPDLIINSHAFPSRMTIAMLLESIAAKGGSLHGKFV 182
HGQKGVCSQLWP DMPF+ VTGM+PDLIIN HAFPSRMTIAMLLESIAAKGGSLHGKFV
Sbjct: 958 HGQKGVCSQLWPDIDMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHGKFV 1017
Query: 183 DATPF 197
DATPF
Sbjct: 1018 DATPF 1022
>gb|AAG52049.1|AC022455_3 DNA-directed RNA polymerase subunit, putative; 8546-1198 [Arabidopsis
thaliana]
Length = 1114
Score = 125 bits (313), Expect = 8e-27
Identities = 59/65 (90%), Positives = 61/65 (93%)
Frame = +3
Query: 3 HGQKGVCSQLWPSEDMPFSEVTGMQPDLIINSHAFPSRMTIAMLLESIAAKGGSLHGKFV 182
HGQKGVCSQLWP DMPF+ VTGM+PDLIIN HAFPSRMTIAMLLESIAAKGGSLHGKFV
Sbjct: 839 HGQKGVCSQLWPDIDMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHGKFV 898
Query: 183 DATPF 197
DATPF
Sbjct: 899 DATPF 903
>ref|NP_564341.2| nuclear RNA polymerase A2 [Arabidopsis thaliana]
gi|332193031|gb|AEE31152.1| nuclear RNA polymerase A2
[Arabidopsis thaliana]
Length = 1178
Score = 125 bits (313), Expect = 8e-27
Identities = 59/65 (90%), Positives = 61/65 (93%)
Frame = +3
Query: 3 HGQKGVCSQLWPSEDMPFSEVTGMQPDLIINSHAFPSRMTIAMLLESIAAKGGSLHGKFV 182
HGQKGVCSQLWP DMPF+ VTGM+PDLIIN HAFPSRMTIAMLLESIAAKGGSLHGKFV
Sbjct: 903 HGQKGVCSQLWPDIDMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHGKFV 962
Query: 183 DATPF 197
DATPF
Sbjct: 963 DATPF 967
>dbj|BAF01996.1| putative DNA-directed RNA polymerase subunit [Arabidopsis thaliana]
Length = 578
Score = 125 bits (313), Expect = 8e-27
Identities = 59/65 (90%), Positives = 61/65 (93%)
Frame = +3
Query: 3 HGQKGVCSQLWPSEDMPFSEVTGMQPDLIINSHAFPSRMTIAMLLESIAAKGGSLHGKFV 182
HGQKGVCSQLWP DMPF+ VTGM+PDLIIN HAFPSRMTIAMLLESIAAKGGSLHGKFV
Sbjct: 303 HGQKGVCSQLWPDIDMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHGKFV 362
Query: 183 DATPF 197
DATPF
Sbjct: 363 DATPF 367
>ref|XP_006464287.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
isoform X1 [Citrus sinensis]
Length = 1175
Score = 124 bits (312), Expect = 1e-26
Identities = 58/65 (89%), Positives = 61/65 (93%)
Frame = +3
Query: 3 HGQKGVCSQLWPSEDMPFSEVTGMQPDLIINSHAFPSRMTIAMLLESIAAKGGSLHGKFV 182
HGQKGVCSQLWP DMPFS VTGM+PDLIIN HAFPSRMTIAMLLES+AAKGGSLHGKF+
Sbjct: 902 HGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFM 961
Query: 183 DATPF 197
DATPF
Sbjct: 962 DATPF 966
>ref|XP_006428126.1| hypothetical protein CICLE_v10024768mg [Citrus clementina]
gi|557530116|gb|ESR41366.1| hypothetical protein
CICLE_v10024768mg [Citrus clementina]
Length = 1082
Score = 124 bits (312), Expect = 1e-26
Identities = 58/65 (89%), Positives = 61/65 (93%)
Frame = +3
Query: 3 HGQKGVCSQLWPSEDMPFSEVTGMQPDLIINSHAFPSRMTIAMLLESIAAKGGSLHGKFV 182
HGQKGVCSQLWP DMPFS VTGM+PDLIIN HAFPSRMTIAMLLES+AAKGGSLHGKF+
Sbjct: 809 HGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFM 868
Query: 183 DATPF 197
DATPF
Sbjct: 869 DATPF 873
>ref|XP_004300118.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA2-like [Fragaria
vesca subsp. vesca]
Length = 1171
Score = 124 bits (312), Expect = 1e-26
Identities = 58/65 (89%), Positives = 61/65 (93%)
Frame = +3
Query: 3 HGQKGVCSQLWPSEDMPFSEVTGMQPDLIINSHAFPSRMTIAMLLESIAAKGGSLHGKFV 182
HGQKGVCSQLWP DMPFS VTGM+PDLIIN HAFPSRMTIAMLLES+AAKGGSLHGK+V
Sbjct: 899 HGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKYV 958
Query: 183 DATPF 197
DATPF
Sbjct: 959 DATPF 963
>gb|EMJ26191.1| hypothetical protein PRUPE_ppa020507mg [Prunus persica]
Length = 1037
Score = 124 bits (312), Expect = 1e-26
Identities = 58/65 (89%), Positives = 61/65 (93%)
Frame = +3
Query: 3 HGQKGVCSQLWPSEDMPFSEVTGMQPDLIINSHAFPSRMTIAMLLESIAAKGGSLHGKFV 182
HGQKGVCSQLWP DMPFS VTGM+PDLIIN HAFPSRMTIAMLLES+AAKGGSLHGK+V
Sbjct: 768 HGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKYV 827
Query: 183 DATPF 197
DATPF
Sbjct: 828 DATPF 832
>ref|XP_002893589.1| hypothetical protein ARALYDRAFT_313639 [Arabidopsis lyrata subsp.
lyrata] gi|297339431|gb|EFH69848.1| hypothetical protein
ARALYDRAFT_313639 [Arabidopsis lyrata subsp. lyrata]
Length = 1188
Score = 123 bits (309), Expect = 2e-26
Identities = 58/65 (89%), Positives = 61/65 (93%)
Frame = +3
Query: 3 HGQKGVCSQLWPSEDMPFSEVTGMQPDLIINSHAFPSRMTIAMLLESIAAKGGSLHGKFV 182
HGQKGVCSQLWP +MPF+ VTGM+PDLIIN HAFPSRMTIAMLLESIAAKGGSLHGKFV
Sbjct: 911 HGQKGVCSQLWPDIEMPFNGVTGMRPDLIINPHAFPSRMTIAMLLESIAAKGGSLHGKFV 970
Query: 183 DATPF 197
DATPF
Sbjct: 971 DATPF 975
>gb|EXC31692.1| putative DNA-directed RNA polymerase I subunit RPA2 [Morus notabilis]
Length = 1243
Score = 123 bits (308), Expect = 3e-26
Identities = 57/65 (87%), Positives = 60/65 (92%)
Frame = +3
Query: 3 HGQKGVCSQLWPSEDMPFSEVTGMQPDLIINSHAFPSRMTIAMLLESIAAKGGSLHGKFV 182
HGQKGVCSQLWP DMPFS TGM+PDLIIN HAFPSRMTIAMLLES+AAKGGSLHGK+V
Sbjct: 903 HGQKGVCSQLWPDIDMPFSGATGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKYV 962
Query: 183 DATPF 197
DATPF
Sbjct: 963 DATPF 967
>ref|XP_002529996.1| DNA-directed RNA polymerase I subunit, putative [Ricinus communis]
gi|223530519|gb|EEF32401.1| DNA-directed RNA polymerase I
subunit, putative [Ricinus communis]
Length = 1159
Score = 122 bits (307), Expect = 4e-26
Identities = 58/65 (89%), Positives = 61/65 (93%)
Frame = +3
Query: 3 HGQKGVCSQLWPSEDMPFSEVTGMQPDLIINSHAFPSRMTIAMLLESIAAKGGSLHGKFV 182
HGQKGVCSQLWP DMPFS VTGM+PDLIIN HAFPSRMTIAMLLES+AAKGGSL+GKFV
Sbjct: 886 HGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESLAAKGGSLNGKFV 945
Query: 183 DATPF 197
DATPF
Sbjct: 946 DATPF 950
>ref|XP_004486057.1| PREDICTED: probable DNA-directed RNA polymerase I subunit RPA2-like
isoform X1 [Cicer arietinum]
gi|502078798|ref|XP_004486058.1| PREDICTED: probable
DNA-directed RNA polymerase I subunit RPA2-like isoform
X2 [Cicer arietinum]
Length = 1177
Score = 122 bits (305), Expect = 6e-26
Identities = 57/65 (87%), Positives = 59/65 (90%)
Frame = +3
Query: 3 HGQKGVCSQLWPSEDMPFSEVTGMQPDLIINSHAFPSRMTIAMLLESIAAKGGSLHGKFV 182
HGQKGVCSQLWP DMPFS TGM+PDLIIN HAFPSRMTIAMLLES+AAKGGSLHGKF
Sbjct: 905 HGQKGVCSQLWPDIDMPFSGTTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGKFK 964
Query: 183 DATPF 197
DATPF
Sbjct: 965 DATPF 969