BLASTX nr result

ID: Zingiber23_contig00045326 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00045326
         (613 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002864521.1| hypothetical protein ARALYDRAFT_918940 [Arab...    59   1e-06
ref|XP_006453430.1| hypothetical protein CICLE_v10010364mg [Citr...    58   2e-06
ref|XP_006280778.1| hypothetical protein CARUB_v10026749mg [Caps...    57   4e-06
ref|XP_006401188.1| hypothetical protein EUTSA_v10015689mg [Eutr...    56   9e-06

>ref|XP_002864521.1| hypothetical protein ARALYDRAFT_918940 [Arabidopsis lyrata subsp.
           lyrata] gi|297310356|gb|EFH40780.1| hypothetical protein
           ARALYDRAFT_918940 [Arabidopsis lyrata subsp. lyrata]
          Length = 335

 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 58/202 (28%), Positives = 86/202 (42%), Gaps = 36/202 (17%)
 Frame = -3

Query: 611 IKNYWNTKLKKKLLGDYRKINNRSKI--SPQYSPINQEHSNFQGALINSETLISASTVER 438
           IKNYWNTKLKKKLLG  +++N +  I  S + +  N  H+        S   +S S +ER
Sbjct: 105 IKNYWNTKLKKKLLGRQKQMNRQDSITDSTENNLNNNNHN-------KSPQNLSNSALER 157

Query: 437 IRLQMCYMNKGNNDSAF------WPICH-VQESQLTNLITSPKFVQQ-----------HV 312
           ++L M   N  +  S+F      WP  H + +S  T    +PK   Q           H 
Sbjct: 158 LQLHMQLQNLQSPFSSFYNNPILWPKLHPLLQSTTTTPNQNPKLASQESFHPLGVNVDHQ 217

Query: 311 NPNDTVFESSQIRQEVALQNLHEDTSGS-----TIGFS----MQEENDQLRELDCFKELL 159
           + N  + E +     +  +N+ +  + +       GFS    +   N  L      KEL 
Sbjct: 218 HNNMKLAEINNGVSSLYSENVEQSQNPAHEFQPNFGFSQDLRIDNHNMDLMNRGVSKELF 277

Query: 158 E-------KESMSWWSSEVKEE 114
           +         S SWWS EV+ E
Sbjct: 278 QVGNEFELTNSSSWWSEEVEVE 299


>ref|XP_006453430.1| hypothetical protein CICLE_v10010364mg [Citrus clementina]
           gi|568841354|ref|XP_006474624.1| PREDICTED:
           transcription factor RAX3-like [Citrus sinensis]
           gi|557556656|gb|ESR66670.1| hypothetical protein
           CICLE_v10010364mg [Citrus clementina]
          Length = 367

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 51/142 (35%), Positives = 69/142 (48%), Gaps = 14/142 (9%)
 Frame = -3

Query: 611 IKNYWNTKLKKKLLGDYRKINN-RSKISPQYSPIN------QEHSNFQGALINSETLISA 453
           IKNYWNT+LKKKLLG  ++ NN    IS     +N       E++N Q         +S 
Sbjct: 105 IKNYWNTRLKKKLLGRRKQSNNINGLISTSGQDVNGVNNGGDENNNSQ-----YSQGLSN 159

Query: 452 STVERIRLQMCYMNKGN-----NDSAFWPICH-VQESQLTNLITSPKFVQQHVNPN-DTV 294
           S +ER++L M   +  N     N+ +FWP  H VQE  + NL +  +  Q   NPN   V
Sbjct: 160 SAIERLQLHMQLQSLQNPLSFYNNPSFWPKLHPVQEKMIQNLQSLNQSCQ---NPNLQNV 216

Query: 293 FESSQIRQEVALQNLHEDTSGS 228
             SSQ+        LHE   G+
Sbjct: 217 LPSSQL-------GLHEQNVGN 231


>ref|XP_006280778.1| hypothetical protein CARUB_v10026749mg [Capsella rubella]
           gi|482549482|gb|EOA13676.1| hypothetical protein
           CARUB_v10026749mg [Capsella rubella]
          Length = 335

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 55/201 (27%), Positives = 83/201 (41%), Gaps = 35/201 (17%)
 Frame = -3

Query: 611 IKNYWNTKLKKKLLGDYRKINNRSKISPQYSPINQEHSNFQGALINSETLISASTVERIR 432
           IKNYWNTKLKKKLLG  +++N +  +S      +   +N       S   +S S +ER++
Sbjct: 105 IKNYWNTKLKKKLLGRQKQMNRQDSMS------DSTENNVTNNNNKSPQNLSNSALERLQ 158

Query: 431 LQMCYMNKGNNDSAF------WPICH-------VQESQLTNLITSPKF------VQQHVN 309
           L M   N  N  S+F      WP  H          +Q + L +   F      V  H N
Sbjct: 159 LHMQLQNLQNPFSSFYNNPILWPKLHPLLQSTTTTPNQNSKLASQESFHPIGLNVDHHEN 218

Query: 308 PNDTVFESSQIRQEVALQNLHEDTSGS-----TIGFS----MQEENDQLRELDCFKELLE 156
            +  + E +     +  +N+ +  + +       GFS    +   N +L      KEL +
Sbjct: 219 SDIKLSEMNNGVSPLYSENVEQSLNPAHDFQPNFGFSQDLRLDNHNMELMNRGGSKELFQ 278

Query: 155 -------KESMSWWSSEVKEE 114
                      SWWS EV+ E
Sbjct: 279 VGNEFELTNGSSWWSEEVELE 299


>ref|XP_006401188.1| hypothetical protein EUTSA_v10015689mg [Eutrema salsugineum]
           gi|557102278|gb|ESQ42641.1| hypothetical protein
           EUTSA_v10015689mg [Eutrema salsugineum]
          Length = 334

 Score = 55.8 bits (133), Expect = 9e-06
 Identities = 57/201 (28%), Positives = 82/201 (40%), Gaps = 35/201 (17%)
 Frame = -3

Query: 611 IKNYWNTKLKKKLLGDYRKINNRSKISPQYSPINQEHSNFQGALIN-SETLISASTVERI 435
           IKNYWNTKLKKKLLG  +++N +  I+      N   +N      N S   +S S +ER+
Sbjct: 105 IKNYWNTKLKKKLLGRQKQMNRQDSIT------NSNENNISNNNNNKSPQNLSNSALERL 158

Query: 434 RLQMCYMNKGNNDSAF------WPICHVQESQLTNLITSPKFVQQ-----------HVNP 306
           +L M   N  +  S+F      WP  H    Q T    +PK   Q           H N 
Sbjct: 159 QLHMQLQNLQSPFSSFYNNPILWPKLH-PLLQSTTHDQNPKLASQETFHPSGVNVNHQNN 217

Query: 305 NDTVFESSQIRQEVALQNLHEDTSGS-----TIGFSMQEENDQLRELDCF-----KELLE 156
           +  + E +     +  +N+ +  + +       GFS     D    +D       KEL +
Sbjct: 218 HIKLAEINNGSSPLYSENIEQSLNPAHEFQPNFGFSQDLRLDNHHNMDLMNRGDSKELFQ 277

Query: 155 -------KESMSWWSSEVKEE 114
                      SWWS EV+ E
Sbjct: 278 VGNEFELTTGSSWWSEEVELE 298


Top