BLASTX nr result
ID: Zingiber23_contig00045177
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00045177
(300 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EAY92795.1| hypothetical protein OsI_14599 [Oryza sativa Indi... 59 9e-07
emb|CAH67783.1| H0201G08.10 [Oryza sativa Indica Group] 59 9e-07
ref|NP_001052029.1| Os04g0110500 [Oryza sativa Japonica Group] g... 59 9e-07
ref|XP_004981392.1| PREDICTED: pentatricopeptide repeat-containi... 58 2e-06
ref|XP_002466267.1| hypothetical protein SORBIDRAFT_01g004770 [S... 57 3e-06
ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago t... 57 3e-06
gb|EXC01449.1| hypothetical protein L484_022020 [Morus notabilis] 57 3e-06
ref|XP_006653103.1| PREDICTED: pentatricopeptide repeat-containi... 57 3e-06
gb|EMS51146.1| hypothetical protein TRIUR3_09018 [Triticum urartu] 57 3e-06
gb|EMJ07625.1| hypothetical protein PRUPE_ppa001946mg [Prunus pe... 57 3e-06
emb|CBI15973.3| unnamed protein product [Vitis vinifera] 56 4e-06
emb|CBI17926.3| unnamed protein product [Vitis vinifera] 56 4e-06
ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containi... 56 4e-06
emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera] 56 4e-06
emb|CAN60259.1| hypothetical protein VITISV_007741 [Vitis vinifera] 56 4e-06
ref|XP_003525660.2| PREDICTED: pentatricopeptide repeat-containi... 56 6e-06
gb|AEP33759.1| organelle transcript processing 82, partial [Bras... 56 6e-06
ref|XP_004508527.1| PREDICTED: pentatricopeptide repeat-containi... 55 7e-06
tpg|DAA51987.1| TPA: hypothetical protein ZEAMMB73_709752 [Zea m... 55 7e-06
ref|NP_001170755.1| uncharacterized protein LOC100384848 [Zea ma... 55 7e-06
>gb|EAY92795.1| hypothetical protein OsI_14599 [Oryza sativa Indica Group]
Length = 530
Score = 58.5 bits (140), Expect = 9e-07
Identities = 25/38 (65%), Positives = 32/38 (84%)
Frame = +2
Query: 5 RLRKEMNSVGLKKTPGCSSIEISGEIYEFLVGDSLHPQ 118
R R+EMNS+ +KKTPGCSSIE+ GE++EF+ G S HPQ
Sbjct: 475 RERREMNSMQVKKTPGCSSIELKGEVHEFVAGGSQHPQ 512
>emb|CAH67783.1| H0201G08.10 [Oryza sativa Indica Group]
Length = 530
Score = 58.5 bits (140), Expect = 9e-07
Identities = 25/38 (65%), Positives = 32/38 (84%)
Frame = +2
Query: 5 RLRKEMNSVGLKKTPGCSSIEISGEIYEFLVGDSLHPQ 118
R R+EMNS+ +KKTPGCSSIE+ GE++EF+ G S HPQ
Sbjct: 475 RERREMNSMQVKKTPGCSSIELKGEVHEFVAGGSQHPQ 512
>ref|NP_001052029.1| Os04g0110500 [Oryza sativa Japonica Group]
gi|38345581|emb|CAE01779.2| OSJNBa0027H06.17 [Oryza
sativa Japonica Group] gi|113563600|dbj|BAF13943.1|
Os04g0110500 [Oryza sativa Japonica Group]
gi|125589117|gb|EAZ29467.1| hypothetical protein
OsJ_13541 [Oryza sativa Japonica Group]
gi|215736988|dbj|BAG95917.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 531
Score = 58.5 bits (140), Expect = 9e-07
Identities = 25/38 (65%), Positives = 32/38 (84%)
Frame = +2
Query: 5 RLRKEMNSVGLKKTPGCSSIEISGEIYEFLVGDSLHPQ 118
R R+EMNS+ +KKTPGCSSIE+ GE++EF+ G S HPQ
Sbjct: 476 RERREMNSMQVKKTPGCSSIELKGEVHEFVAGGSQHPQ 513
>ref|XP_004981392.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Setaria italica]
Length = 457
Score = 57.8 bits (138), Expect = 2e-06
Identities = 25/38 (65%), Positives = 31/38 (81%)
Frame = +2
Query: 5 RLRKEMNSVGLKKTPGCSSIEISGEIYEFLVGDSLHPQ 118
R RKEMNS+ +KKTPGCSSIE+ GE++EF+ G HPQ
Sbjct: 406 RERKEMNSLQMKKTPGCSSIELDGEVHEFVAGGFQHPQ 443
>ref|XP_002466267.1| hypothetical protein SORBIDRAFT_01g004770 [Sorghum bicolor]
gi|241920121|gb|EER93265.1| hypothetical protein
SORBIDRAFT_01g004770 [Sorghum bicolor]
Length = 537
Score = 57.0 bits (136), Expect = 3e-06
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = +2
Query: 5 RLRKEMNSVGLKKTPGCSSIEISGEIYEFLVGDSLHPQ 118
R R+EMNS+ +KKTPGCSSIE+ GE++EF+ G HPQ
Sbjct: 482 RERREMNSLQMKKTPGCSSIELDGEVHEFVAGSFQHPQ 519
>ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355510321|gb|AES91463.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 738
Score = 57.0 bits (136), Expect = 3e-06
Identities = 22/38 (57%), Positives = 30/38 (78%)
Frame = +2
Query: 5 RLRKEMNSVGLKKTPGCSSIEISGEIYEFLVGDSLHPQ 118
R+R +N G+KK PGC+SIEI G+++EFLVGD HP+
Sbjct: 590 RIRTRLNDKGMKKVPGCTSIEIDGDVHEFLVGDKFHPE 627
>gb|EXC01449.1| hypothetical protein L484_022020 [Morus notabilis]
Length = 739
Score = 56.6 bits (135), Expect = 3e-06
Identities = 25/37 (67%), Positives = 30/37 (81%)
Frame = +2
Query: 5 RLRKEMNSVGLKKTPGCSSIEISGEIYEFLVGDSLHP 115
RLRK M G+KK PGCSSIEI+G ++EFLVGD+ HP
Sbjct: 590 RLRKAMRDSGIKKEPGCSSIEINGIVHEFLVGDNSHP 626
>ref|XP_006653103.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Oryza brachyantha]
Length = 527
Score = 56.6 bits (135), Expect = 3e-06
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = +2
Query: 5 RLRKEMNSVGLKKTPGCSSIEISGEIYEFLVGDSLHPQ 118
R R+EMNS+ +KKTPGCS IE+ GE++EF+ G S HPQ
Sbjct: 472 RERREMNSLQMKKTPGCSLIELKGEVHEFVAGGSQHPQ 509
>gb|EMS51146.1| hypothetical protein TRIUR3_09018 [Triticum urartu]
Length = 424
Score = 56.6 bits (135), Expect = 3e-06
Identities = 23/37 (62%), Positives = 31/37 (83%)
Frame = +2
Query: 5 RLRKEMNSVGLKKTPGCSSIEISGEIYEFLVGDSLHP 115
R R+EMNS+ +KKTPGCSS+E+ GE++EF+ G S HP
Sbjct: 369 RERREMNSLRMKKTPGCSSVELDGEVHEFVAGGSQHP 405
>gb|EMJ07625.1| hypothetical protein PRUPE_ppa001946mg [Prunus persica]
Length = 738
Score = 56.6 bits (135), Expect = 3e-06
Identities = 23/36 (63%), Positives = 29/36 (80%)
Frame = +2
Query: 8 LRKEMNSVGLKKTPGCSSIEISGEIYEFLVGDSLHP 115
LRK M G+KK PGCSSIE++G ++EFLVGD+ HP
Sbjct: 590 LRKHMRDAGIKKEPGCSSIEVNGSVHEFLVGDNSHP 625
>emb|CBI15973.3| unnamed protein product [Vitis vinifera]
Length = 652
Score = 56.2 bits (134), Expect = 4e-06
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +2
Query: 8 LRKEMNSVGLKKTPGCSSIEISGEIYEFLVGDSLHP 115
LRK M VGLKK PGCSSIE+ G ++EFLVGD+ HP
Sbjct: 504 LRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHP 539
>emb|CBI17926.3| unnamed protein product [Vitis vinifera]
Length = 602
Score = 56.2 bits (134), Expect = 4e-06
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = +2
Query: 2 MRLRKEMNSVGLKKTPGCSSIEISGEIYEFLVGDSLHP 115
M LRKE+ GLKK+PGCSSIE++G ++ FLVGD+ HP
Sbjct: 547 MGLRKEIKKKGLKKSPGCSSIEVNGSVHGFLVGDNSHP 584
>ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
chloroplastic-like [Vitis vinifera]
Length = 743
Score = 56.2 bits (134), Expect = 4e-06
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +2
Query: 8 LRKEMNSVGLKKTPGCSSIEISGEIYEFLVGDSLHP 115
LRK M VGLKK PGCSSIE+ G ++EFLVGD+ HP
Sbjct: 595 LRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHP 630
>emb|CAN72716.1| hypothetical protein VITISV_032470 [Vitis vinifera]
Length = 694
Score = 56.2 bits (134), Expect = 4e-06
Identities = 25/36 (69%), Positives = 29/36 (80%)
Frame = +2
Query: 8 LRKEMNSVGLKKTPGCSSIEISGEIYEFLVGDSLHP 115
LRK M VGLKK PGCSSIE+ G ++EFLVGD+ HP
Sbjct: 474 LRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHP 509
>emb|CAN60259.1| hypothetical protein VITISV_007741 [Vitis vinifera]
Length = 602
Score = 56.2 bits (134), Expect = 4e-06
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = +2
Query: 2 MRLRKEMNSVGLKKTPGCSSIEISGEIYEFLVGDSLHP 115
M LRKE+ GLKK+PGCSSIE++G ++ FLVGD+ HP
Sbjct: 547 MGLRKEIKKKGLKKSPGCSSIEVNGSVHGFLVGDNSHP 584
>ref|XP_003525660.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Glycine max]
Length = 737
Score = 55.8 bits (133), Expect = 6e-06
Identities = 22/38 (57%), Positives = 30/38 (78%)
Frame = +2
Query: 5 RLRKEMNSVGLKKTPGCSSIEISGEIYEFLVGDSLHPQ 118
++R ++N G+KK PGC+SIEI G ++EFLVGD HPQ
Sbjct: 589 KIRTKLNDKGMKKVPGCTSIEIDGVVHEFLVGDKFHPQ 626
>gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
Length = 691
Score = 55.8 bits (133), Expect = 6e-06
Identities = 22/38 (57%), Positives = 30/38 (78%)
Frame = +2
Query: 5 RLRKEMNSVGLKKTPGCSSIEISGEIYEFLVGDSLHPQ 118
R+R+ +N G+KK PGCSSIEI ++EF++GD LHPQ
Sbjct: 543 RIREVLNGKGMKKVPGCSSIEIDSVVHEFIIGDKLHPQ 580
>ref|XP_004508527.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g08070-like [Cicer arietinum]
Length = 737
Score = 55.5 bits (132), Expect = 7e-06
Identities = 22/38 (57%), Positives = 29/38 (76%)
Frame = +2
Query: 5 RLRKEMNSVGLKKTPGCSSIEISGEIYEFLVGDSLHPQ 118
R+R +N G+KK PGC+SIEI G ++EFLVGD HP+
Sbjct: 589 RIRTRLNDKGMKKVPGCTSIEIDGVVHEFLVGDKFHPE 626
>tpg|DAA51987.1| TPA: hypothetical protein ZEAMMB73_709752 [Zea mays]
Length = 536
Score = 55.5 bits (132), Expect = 7e-06
Identities = 23/38 (60%), Positives = 31/38 (81%)
Frame = +2
Query: 5 RLRKEMNSVGLKKTPGCSSIEISGEIYEFLVGDSLHPQ 118
R R+EMN++ +KKTPGCSSIE+ GE++EF+ G HPQ
Sbjct: 481 RERREMNNLQIKKTPGCSSIELDGEVHEFVAGGFQHPQ 518
>ref|NP_001170755.1| uncharacterized protein LOC100384848 [Zea mays]
gi|238007354|gb|ACR34712.1| unknown [Zea mays]
Length = 464
Score = 55.5 bits (132), Expect = 7e-06
Identities = 23/38 (60%), Positives = 31/38 (81%)
Frame = +2
Query: 5 RLRKEMNSVGLKKTPGCSSIEISGEIYEFLVGDSLHPQ 118
R R+EMN++ +KKTPGCSSIE+ GE++EF+ G HPQ
Sbjct: 409 RERREMNNLQIKKTPGCSSIELDGEVHEFVAGGFQHPQ 446