BLASTX nr result

ID: Zingiber23_contig00045135 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00045135
         (362 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004984663.1| PREDICTED: uncharacterized protein LOC101769...    39   8e-06

>ref|XP_004984663.1| PREDICTED: uncharacterized protein LOC101769742 [Setaria italica]
          Length = 895

 Score = 38.9 bits (89), Expect(2) = 8e-06
 Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 3/69 (4%)
 Frame = -1

Query: 275 AHKYDSECTCTIFSLNEV*KID-AWANMGKRSNKHWLVSNNIIGRMNISRTKN--HDLKN 105
           + K D E T  +F++ E  K   AW   G ++ KH L+S +I+G + ++R K+  H  KN
Sbjct: 587 SEKDDLESTYAVFTVEEPKKKSGAWIKAGGKNKKHHLLS-SIVGELKVTRRKSRCHHTKN 645

Query: 104 HYFTGEFVL 78
            +   EFVL
Sbjct: 646 IHVHREFVL 654



 Score = 36.2 bits (82), Expect(2) = 8e-06
 Identities = 15/27 (55%), Positives = 21/27 (77%)
 Frame = -3

Query: 357 KAILQISWKNGVSLYMLSSSHGDTLAA 277
           +A+LQ++WKNG+ L+MLS    D LAA
Sbjct: 553 QALLQLAWKNGLPLFMLSYGESDILAA 579


Top