BLASTX nr result
ID: Zingiber23_contig00045117
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00045117
(324 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN81634.1| hypothetical protein VITISV_034565 [Vitis vinifera] 144 9e-33
emb|CAN79684.1| hypothetical protein VITISV_003855 [Vitis vinifera] 143 3e-32
emb|CAN77425.1| hypothetical protein VITISV_041980 [Vitis vinifera] 142 4e-32
emb|CAN62499.1| hypothetical protein VITISV_000082 [Vitis vinifera] 141 8e-32
emb|CAN66588.1| hypothetical protein VITISV_017097 [Vitis vinifera] 137 2e-30
emb|CAN82579.1| hypothetical protein VITISV_007813 [Vitis vinifera] 136 3e-30
emb|CAN83832.1| hypothetical protein VITISV_039455 [Vitis vinifera] 124 2e-26
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa] 117 2e-24
emb|CAH66031.1| H0515C11.7 [Oryza sativa Indica Group] 114 2e-23
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum] 111 9e-23
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc... 111 1e-22
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 110 2e-22
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 110 2e-22
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 109 3e-22
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 109 3e-22
gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa... 109 3e-22
emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera] 109 3e-22
emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera] 109 3e-22
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas] 109 3e-22
gb|AAW22873.1| putative polyprotein [Solanum lycopersicum] 108 6e-22
>emb|CAN81634.1| hypothetical protein VITISV_034565 [Vitis vinifera]
Length = 595
Score = 144 bits (364), Expect = 9e-33
Identities = 66/94 (70%), Positives = 78/94 (82%)
Frame = +2
Query: 41 NSSLAHHFKLSSTQCLKTDDEIQEMSKVPYVSAVGCLMYAMVCTRPDLAQAVSMVSKFLS 220
++ LA+HF+LS+ QC KT+DE+++MSKVPY SAVGC MYAMVC RPDLA VS+VSKFLS
Sbjct: 434 STPLANHFRLSTNQCPKTBDEVKDMSKVPYASAVGCFMYAMVCIRPDLAHTVSVVSKFLS 493
Query: 221 NPSRPHWDAVK*IFRYLRNTTNYGIMFSRQPEDP 322
NP R HWDA+K IFRYLR T YGIMFS+Q DP
Sbjct: 494 NPGRMHWDAIKWIFRYLRGXTYYGIMFSKQQSDP 527
>emb|CAN79684.1| hypothetical protein VITISV_003855 [Vitis vinifera]
Length = 406
Score = 143 bits (360), Expect = 3e-32
Identities = 68/94 (72%), Positives = 80/94 (85%)
Frame = +2
Query: 41 NSSLAHHFKLSSTQCLKTDDEIQEMSKVPYVSAVGCLMYAMVCTRPDLAQAVSMVSKFLS 220
++ LA+HF+LS++QC KTD E+ +MSKVPY SAVGCLMYAMVCTR DLA AVS+VSKFLS
Sbjct: 163 STPLANHFRLSTSQCPKTDGEVNDMSKVPYASAVGCLMYAMVCTRLDLAHAVSVVSKFLS 222
Query: 221 NPSRPHWDAVK*IFRYLRNTTNYGIMFSRQPEDP 322
NP R +WDAVK IFRYLR TT+YGI FS+Q DP
Sbjct: 223 NPGRMNWDAVKWIFRYLRGTTDYGITFSKQQSDP 256
>emb|CAN77425.1| hypothetical protein VITISV_041980 [Vitis vinifera]
Length = 367
Score = 142 bits (359), Expect = 4e-32
Identities = 67/94 (71%), Positives = 80/94 (85%)
Frame = +2
Query: 41 NSSLAHHFKLSSTQCLKTDDEIQEMSKVPYVSAVGCLMYAMVCTRPDLAQAVSMVSKFLS 220
++ LA+HF+LS++QC KTD E+ +MSKVPY SAVGCLMYAMVCTR DLA AVS+VSKFLS
Sbjct: 163 STPLANHFRLSTSQCPKTDGEVNDMSKVPYASAVGCLMYAMVCTRLDLAHAVSVVSKFLS 222
Query: 221 NPSRPHWDAVK*IFRYLRNTTNYGIMFSRQPEDP 322
NP R +WDA+K IFRYLR TT+YGI FS+Q DP
Sbjct: 223 NPGRMNWDAIKWIFRYLRGTTDYGITFSKQQSDP 256
>emb|CAN62499.1| hypothetical protein VITISV_000082 [Vitis vinifera]
Length = 190
Score = 141 bits (356), Expect = 8e-32
Identities = 66/90 (73%), Positives = 77/90 (85%)
Frame = +2
Query: 50 LAHHFKLSSTQCLKTDDEIQEMSKVPYVSAVGCLMYAMVCTRPDLAQAVSMVSKFLSNPS 229
LA+HF+LS+ QC K DDE+++MSKVPY SA+GCLMYAMVCTRPDLA AVS+VSKFLSNP
Sbjct: 11 LANHFRLSTNQCPKIDDEVKDMSKVPYASAMGCLMYAMVCTRPDLAHAVSVVSKFLSNPG 70
Query: 230 RPHWDAVK*IFRYLRNTTNYGIMFSRQPED 319
R WDAVK IFRYLR T +YG+MFS+Q D
Sbjct: 71 RMDWDAVKWIFRYLRGTIDYGLMFSKQQSD 100
>emb|CAN66588.1| hypothetical protein VITISV_017097 [Vitis vinifera]
Length = 815
Score = 137 bits (345), Expect = 2e-30
Identities = 63/94 (67%), Positives = 77/94 (81%)
Frame = +2
Query: 41 NSSLAHHFKLSSTQCLKTDDEIQEMSKVPYVSAVGCLMYAMVCTRPDLAQAVSMVSKFLS 220
++ LA+HF+LS+ QC K DDE+++ SKVPY + VGCLMYAMVCTRP LA +S+VS+FLS
Sbjct: 611 STPLANHFRLSTNQCPKIDDEVKDTSKVPYATTVGCLMYAMVCTRPYLAHVISVVSRFLS 670
Query: 221 NPSRPHWDAVK*IFRYLRNTTNYGIMFSRQPEDP 322
NP R HWDAVK IFR LR TT+YGIMFS+Q DP
Sbjct: 671 NPGRMHWDAVKWIFRNLRGTTDYGIMFSKQQSDP 704
>emb|CAN82579.1| hypothetical protein VITISV_007813 [Vitis vinifera]
Length = 726
Score = 136 bits (342), Expect = 3e-30
Identities = 63/94 (67%), Positives = 77/94 (81%)
Frame = +2
Query: 41 NSSLAHHFKLSSTQCLKTDDEIQEMSKVPYVSAVGCLMYAMVCTRPDLAQAVSMVSKFLS 220
++ LA+HF+LS+ QC KT+DE+++MSKVPY SA+GCLMYAMVCTRPDLA V +VSKFLS
Sbjct: 540 STPLANHFRLSTNQCPKTBDEVKDMSKVPYASAMGCLMYAMVCTRPDLAHVVIVVSKFLS 599
Query: 221 NPSRPHWDAVK*IFRYLRNTTNYGIMFSRQPEDP 322
N R HWD VK IFRYL TT+Y IMF++Q DP
Sbjct: 600 NLGRIHWDVVKWIFRYLXGTTDYDIMFNKQQGDP 633
>emb|CAN83832.1| hypothetical protein VITISV_039455 [Vitis vinifera]
Length = 319
Score = 124 bits (310), Expect = 2e-26
Identities = 60/103 (58%), Positives = 73/103 (70%)
Frame = +2
Query: 14 HSFDKMFYNNSSLAHHFKLSSTQCLKTDDEIQEMSKVPYVSAVGCLMYAMVCTRPDLAQA 193
HS+ + ++ + LS+ C K DDE++ MSKVPY SAVGCLMYAMVCTRP+L Q
Sbjct: 124 HSYVERVLERFNMDNAKPLSTPLCPKIDDEVKYMSKVPYASAVGCLMYAMVCTRPNLVQV 183
Query: 194 VSMVSKFLSNPSRPHWDAVK*IFRYLRNTTNYGIMFSRQPEDP 322
VS+VSKFLSNP HWD VK FRY R TT+Y IMF++Q DP
Sbjct: 184 VSVVSKFLSNPGILHWDVVKWTFRYFRGTTDYDIMFNKQQSDP 226
>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
Length = 1297
Score = 117 bits (293), Expect = 2e-24
Identities = 55/87 (63%), Positives = 67/87 (77%)
Frame = +2
Query: 50 LAHHFKLSSTQCLKTDDEIQEMSKVPYVSAVGCLMYAMVCTRPDLAQAVSMVSKFLSNPS 229
LA HF+LS+ Q EI M VPY SAVGCLMYAM+CTRPDLAQA+S+VSK++SNP
Sbjct: 1057 LAAHFRLSAEQRPSDQKEIDMMKNVPYASAVGCLMYAMICTRPDLAQAMSVVSKYMSNPG 1116
Query: 230 RPHWDAVK*IFRYLRNTTNYGIMFSRQ 310
+ HW+AVK IF+YL+NT GIMF R+
Sbjct: 1117 KRHWEAVKWIFKYLKNTRQLGIMFERR 1143
>emb|CAH66031.1| H0515C11.7 [Oryza sativa Indica Group]
Length = 293
Score = 114 bits (284), Expect = 2e-23
Identities = 50/89 (56%), Positives = 71/89 (79%)
Frame = +2
Query: 41 NSSLAHHFKLSSTQCLKTDDEIQEMSKVPYVSAVGCLMYAMVCTRPDLAQAVSMVSKFLS 220
++S+A HFKLS+ QC TD++++ MS+VPY SAVG LMYAMVC+RPDL+ A+S+VS++++
Sbjct: 48 STSIAPHFKLSALQCASTDEDVEYMSRVPYSSAVGSLMYAMVCSRPDLSHAMSLVSRYMT 107
Query: 221 NPSRPHWDAVK*IFRYLRNTTNYGIMFSR 307
NP + HW A+ IFRYLR TT+ + F R
Sbjct: 108 NPGKEHWKAIHWIFRYLRGTTDACLKFGR 136
>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
Length = 1338
Score = 111 bits (278), Expect = 9e-23
Identities = 52/84 (61%), Positives = 65/84 (77%)
Frame = +2
Query: 50 LAHHFKLSSTQCLKTDDEIQEMSKVPYVSAVGCLMYAMVCTRPDLAQAVSMVSKFLSNPS 229
LA+HF+LS+ Q TDDE ++M ++PY SAVG LMYAMVCTRPD+A AV +VS+FLSNP
Sbjct: 1086 LANHFRLSTKQSPSTDDERRKMERIPYASAVGSLMYAMVCTRPDIAHAVGVVSRFLSNPG 1145
Query: 230 RPHWDAVK*IFRYLRNTTNYGIMF 301
+ HWDAVK I RYLR T+ + F
Sbjct: 1146 KEHWDAVKWILRYLRGTSKLCLCF 1169
>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1278
Score = 111 bits (277), Expect = 1e-22
Identities = 49/89 (55%), Positives = 70/89 (78%)
Frame = +2
Query: 41 NSSLAHHFKLSSTQCLKTDDEIQEMSKVPYVSAVGCLMYAMVCTRPDLAQAVSMVSKFLS 220
++ +A HFKLS+ QC TD++++ MS+VPY SAVG LMYAMVC+RPDL+ A+S+VS++++
Sbjct: 1077 STPIAPHFKLSALQCANTDEDVEYMSRVPYSSAVGSLMYAMVCSRPDLSHAMSLVSRYMT 1136
Query: 221 NPSRPHWDAVK*IFRYLRNTTNYGIMFSR 307
NP + HW AV+ IFRYLR T + + F R
Sbjct: 1137 NPGKEHWKAVQWIFRYLRGTADACLKFGR 1165
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
Length = 1335
Score = 110 bits (276), Expect = 2e-22
Identities = 52/89 (58%), Positives = 69/89 (77%)
Frame = +2
Query: 41 NSSLAHHFKLSSTQCLKTDDEIQEMSKVPYVSAVGCLMYAMVCTRPDLAQAVSMVSKFLS 220
++ +A HFKLS+ QC TD EI+ MS+VPY SAVG LMYAMVC+RPDL+ A+S+VS+++S
Sbjct: 1090 STPIAPHFKLSAAQCPSTDAEIEYMSRVPYSSAVGSLMYAMVCSRPDLSYAMSLVSRYMS 1149
Query: 221 NPSRPHWDAVK*IFRYLRNTTNYGIMFSR 307
NP + HW A++ IFRYLR TT + F R
Sbjct: 1150 NPGKEHWRALQWIFRYLRGTTYSCLKFGR 1178
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 110 bits (275), Expect = 2e-22
Identities = 52/89 (58%), Positives = 68/89 (76%)
Frame = +2
Query: 41 NSSLAHHFKLSSTQCLKTDDEIQEMSKVPYVSAVGCLMYAMVCTRPDLAQAVSMVSKFLS 220
++ +A HFKLS+ QC TD EI+ MS+VPY SAVG LMYAMVC+RPDL+ A+S+VS+++S
Sbjct: 1088 STPIAPHFKLSAAQCPSTDAEIEYMSRVPYSSAVGSLMYAMVCSRPDLSYAMSLVSRYMS 1147
Query: 221 NPSRPHWDAVK*IFRYLRNTTNYGIMFSR 307
NP + HW V+ IFRYLR TT + F R
Sbjct: 1148 NPGKEHWRVVQWIFRYLRGTTYSCLKFGR 1176
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 109 bits (273), Expect = 3e-22
Identities = 52/89 (58%), Positives = 68/89 (76%)
Frame = +2
Query: 41 NSSLAHHFKLSSTQCLKTDDEIQEMSKVPYVSAVGCLMYAMVCTRPDLAQAVSMVSKFLS 220
++ +A HFKLS+ QC D EI+ MS+VPY SAVG LMYAMVC+RPDL+ A+S+VS+++S
Sbjct: 1088 STPIAPHFKLSAAQCPSIDAEIEYMSRVPYSSAVGSLMYAMVCSRPDLSYAMSLVSRYMS 1147
Query: 221 NPSRPHWDAVK*IFRYLRNTTNYGIMFSR 307
NP + HW AV+ IFRYLR TT + F R
Sbjct: 1148 NPGKEHWRAVQWIFRYLRGTTYSCLKFGR 1176
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 109 bits (273), Expect = 3e-22
Identities = 52/89 (58%), Positives = 68/89 (76%)
Frame = +2
Query: 41 NSSLAHHFKLSSTQCLKTDDEIQEMSKVPYVSAVGCLMYAMVCTRPDLAQAVSMVSKFLS 220
++ +A HFKLS+ QC D EI+ MS+VPY SAVG LMYAMVC+RPDL+ A+S+VS+++S
Sbjct: 1088 STPIAPHFKLSAAQCPSIDAEIEYMSRVPYSSAVGSLMYAMVCSRPDLSYAMSLVSRYMS 1147
Query: 221 NPSRPHWDAVK*IFRYLRNTTNYGIMFSR 307
NP + HW AV+ IFRYLR TT + F R
Sbjct: 1148 NPGKEHWRAVQWIFRYLRGTTYSCLKFGR 1176
>gb|AAL91607.1|AC099400_13 Putative pol polyprotein [Oryza sativa Japonica Group]
gi|18542925|gb|AAL75759.1| Putative pol polyprotein
[Oryza sativa Japonica Group] gi|31429763|gb|AAP51772.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1005
Score = 109 bits (273), Expect = 3e-22
Identities = 49/86 (56%), Positives = 67/86 (77%)
Frame = +2
Query: 50 LAHHFKLSSTQCLKTDDEIQEMSKVPYVSAVGCLMYAMVCTRPDLAQAVSMVSKFLSNPS 229
+A HFKLS QC TD++++ MS+VPY SAVG LMYAMVC+RPDL+ A+S+VS++++NP
Sbjct: 763 IAPHFKLSVLQCASTDEDVEYMSRVPYSSAVGSLMYAMVCSRPDLSHAMSLVSRYMANPG 822
Query: 230 RPHWDAVK*IFRYLRNTTNYGIMFSR 307
+ HW AV+ IFRYLR T + + F R
Sbjct: 823 KEHWKAVQWIFRYLRGTADACLKFGR 848
>emb|CAN77602.1| hypothetical protein VITISV_024474 [Vitis vinifera]
Length = 1207
Score = 109 bits (273), Expect = 3e-22
Identities = 53/87 (60%), Positives = 64/87 (73%)
Frame = +2
Query: 41 NSSLAHHFKLSSTQCLKTDDEIQEMSKVPYVSAVGCLMYAMVCTRPDLAQAVSMVSKFLS 220
+S LA HFKLSS TD E ++M +VPY SAVG LMYAMVCTRPD+A A+ +VS+FLS
Sbjct: 934 SSPLASHFKLSSRHSPSTDKEKEDMRRVPYASAVGSLMYAMVCTRPDIAYAIGVVSRFLS 993
Query: 221 NPSRPHWDAVK*IFRYLRNTTNYGIMF 301
NP R HW+AVK I RYLR T+ + F
Sbjct: 994 NPGRHHWEAVKWIMRYLRGTSKLKLTF 1020
>emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]
Length = 1362
Score = 109 bits (273), Expect = 3e-22
Identities = 53/87 (60%), Positives = 64/87 (73%)
Frame = +2
Query: 41 NSSLAHHFKLSSTQCLKTDDEIQEMSKVPYVSAVGCLMYAMVCTRPDLAQAVSMVSKFLS 220
+S LA HFKLSS TD E ++M +VPY SA+G LMYAMVCTRPD+A AV +VS+FLS
Sbjct: 1053 SSPLASHFKLSSRHSPSTDKEKEDMRRVPYASAIGSLMYAMVCTRPDIAYAVGVVSRFLS 1112
Query: 221 NPSRPHWDAVK*IFRYLRNTTNYGIMF 301
NP R HW+AVK I RYLR T+ + F
Sbjct: 1113 NPGRHHWEAVKWIMRYLRGTSKLKLTF 1139
>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
Length = 1415
Score = 109 bits (273), Expect = 3e-22
Identities = 52/87 (59%), Positives = 64/87 (73%)
Frame = +2
Query: 41 NSSLAHHFKLSSTQCLKTDDEIQEMSKVPYVSAVGCLMYAMVCTRPDLAQAVSMVSKFLS 220
++ L HFKL QC ++ E +EM +VPY SAVG LMYAMVCTRPD+A AV +VS+FLS
Sbjct: 1080 STPLDMHFKLCKKQCPSSEKEKEEMQRVPYSSAVGSLMYAMVCTRPDIAHAVGVVSRFLS 1139
Query: 221 NPSRPHWDAVK*IFRYLRNTTNYGIMF 301
NP R HWDAVK I RYLR T++ + F
Sbjct: 1140 NPGREHWDAVKWILRYLRGTSSLSLCF 1166
>gb|AAW22873.1| putative polyprotein [Solanum lycopersicum]
Length = 687
Score = 108 bits (271), Expect = 6e-22
Identities = 51/87 (58%), Positives = 64/87 (73%)
Frame = +2
Query: 41 NSSLAHHFKLSSTQCLKTDDEIQEMSKVPYVSAVGCLMYAMVCTRPDLAQAVSMVSKFLS 220
N+ LA HFKLS C T+ E + MS +PY S VG LMYAMVCTRPD+A AV +VS++L+
Sbjct: 442 NTPLAAHFKLSKRCCPTTEKEKESMSHIPYSSVVGSLMYAMVCTRPDIAHAVGLVSRYLA 501
Query: 221 NPSRPHWDAVK*IFRYLRNTTNYGIMF 301
NPS+ HW+AVK I RYLR T+N + F
Sbjct: 502 NPSKVHWEAVKWILRYLRGTSNLSLCF 528