BLASTX nr result

ID: Zingiber23_contig00045103 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00045103
         (288 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC73934.1| hypothetical protein OsI_08798 [Oryza sativa Indi...    74   2e-11
dbj|BAD15918.1| hypothetical protein [Oryza sativa Japonica Grou...    74   2e-11
gb|EEE57738.1| hypothetical protein OsJ_08252 [Oryza sativa Japo...    74   2e-11
ref|XP_006649012.1| PREDICTED: E3 ubiquitin-protein ligase ATL41...    72   8e-11
ref|NP_001057362.1| Os06g0271600 [Oryza sativa Japonica Group] g...    72   1e-10
gb|EAZ36591.1| hypothetical protein OsJ_20934 [Oryza sativa Japo...    72   1e-10
ref|XP_003560821.1| PREDICTED: putative RING-H2 finger protein A...    71   1e-10
gb|AFW76900.1| putative RING zinc finger domain superfamily prot...    70   2e-10
ref|XP_002438223.1| hypothetical protein SORBIDRAFT_10g009860 [S...    70   2e-10
ref|XP_003572980.1| PREDICTED: E3 ubiquitin-protein ligase ATL23...    70   3e-10
ref|XP_004965207.1| PREDICTED: E3 ubiquitin-protein ligase EL5-l...    70   4e-10
gb|EMS67164.1| RING-H2 finger protein ATL52 [Triticum urartu]          69   8e-10
ref|XP_004955191.1| PREDICTED: RING-H2 finger protein ATL51-like...    68   1e-09
ref|XP_004955193.1| PREDICTED: E3 ubiquitin-protein ligase EL5-l...    68   1e-09
ref|XP_004955190.1| PREDICTED: E3 ubiquitin-protein ligase ATL23...    68   1e-09
ref|XP_002454341.1| hypothetical protein SORBIDRAFT_04g029060 [S...    67   2e-09
ref|NP_001048009.2| Os02g0729900 [Oryza sativa Japonica Group] g...    67   3e-09
ref|XP_006647838.1| PREDICTED: E3 ubiquitin-protein ligase ATL23...    66   4e-09
gb|EMT31307.1| RING-H2 finger protein ATL4J [Aegilops tauschii]        65   7e-09
ref|XP_004953797.1| PREDICTED: E3 ubiquitin-protein ligase ATL23...    65   9e-09

>gb|EEC73934.1| hypothetical protein OsI_08798 [Oryza sativa Indica Group]
          Length = 158

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 34/56 (60%), Positives = 39/56 (69%), Gaps = 4/56 (7%)
 Frame = +2

Query: 2   PELLAELPCFELKQEAGD----ECAVCLEKLEAGDCCRRLPACAHVFHARCVDSWL 157
           P+ +A LPC E K++ G     ECAVCLE  +AGD CR LP C H FHARCVDSWL
Sbjct: 56  PDEIAVLPCHERKEDGGGGGGGECAVCLEAFQAGDWCRVLPRCEHGFHARCVDSWL 111


>dbj|BAD15918.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|46390853|dbj|BAD16357.1| hypothetical protein [Oryza
           sativa Japonica Group]
          Length = 320

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 34/56 (60%), Positives = 39/56 (69%), Gaps = 4/56 (7%)
 Frame = +2

Query: 2   PELLAELPCFELKQEAGD----ECAVCLEKLEAGDCCRRLPACAHVFHARCVDSWL 157
           P+ +A LPC E K++ G     ECAVCLE  +AGD CR LP C H FHARCVDSWL
Sbjct: 56  PDEIAVLPCHERKEDGGGGGGGECAVCLEAFQAGDRCRVLPRCEHGFHARCVDSWL 111



 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 32/51 (62%), Positives = 36/51 (70%)
 Frame = +2

Query: 5   ELLAELPCFELKQEAGDECAVCLEKLEAGDCCRRLPACAHVFHARCVDSWL 157
           E + ELPC  +K+ AG ECAVCLE   AGD  R LP C H FHA+CVDSWL
Sbjct: 234 EQVGELPCHVVKEGAG-ECAVCLEAFRAGDRRRVLPRCEHGFHAQCVDSWL 283


>gb|EEE57738.1| hypothetical protein OsJ_08252 [Oryza sativa Japonica Group]
          Length = 158

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 34/56 (60%), Positives = 39/56 (69%), Gaps = 4/56 (7%)
 Frame = +2

Query: 2   PELLAELPCFELKQEAGD----ECAVCLEKLEAGDCCRRLPACAHVFHARCVDSWL 157
           P+ +A LPC E K++ G     ECAVCLE  +AGD CR LP C H FHARCVDSWL
Sbjct: 56  PDEIAVLPCHERKEDGGGGGRGECAVCLEAFQAGDRCRVLPRCEHGFHARCVDSWL 111


>ref|XP_006649012.1| PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Oryza
           brachyantha]
          Length = 160

 Score = 72.0 bits (175), Expect = 8e-11
 Identities = 34/55 (61%), Positives = 37/55 (67%), Gaps = 3/55 (5%)
 Frame = +2

Query: 2   PELLAELPCFELKQEAGD---ECAVCLEKLEAGDCCRRLPACAHVFHARCVDSWL 157
           P+ +A LPC E K   G    ECAVCLE  +AGD CR LP C H FHARCVDSWL
Sbjct: 56  PDEIAVLPCHERKDGGGGGGGECAVCLEAFQAGDRCRVLPRCEHGFHARCVDSWL 110


>ref|NP_001057362.1| Os06g0271600 [Oryza sativa Japonica Group]
           gi|55296953|dbj|BAD68429.1| hypothetical protein [Oryza
           sativa Japonica Group] gi|113595402|dbj|BAF19276.1|
           Os06g0271600 [Oryza sativa Japonica Group]
           gi|125554861|gb|EAZ00467.1| hypothetical protein
           OsI_22489 [Oryza sativa Indica Group]
          Length = 173

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 32/50 (64%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
 Frame = +2

Query: 11  LAELPCFEL-KQEAGDECAVCLEKLEAGDCCRRLPACAHVFHARCVDSWL 157
           +  LPC ++ K   G +CAVCLE+LEAGD CRRLP C H FHA CVDSWL
Sbjct: 73  IGALPCHDVVKGGGGGDCAVCLEELEAGDRCRRLPRCEHSFHAPCVDSWL 122


>gb|EAZ36591.1| hypothetical protein OsJ_20934 [Oryza sativa Japonica Group]
          Length = 178

 Score = 71.6 bits (174), Expect = 1e-10
 Identities = 32/53 (60%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
 Frame = +2

Query: 2   PELLAELPCFEL-KQEAGDECAVCLEKLEAGDCCRRLPACAHVFHARCVDSWL 157
           P+ +  LPC ++ K   G +CAVCLE+LEAGD C RLP C H FHA CVDSWL
Sbjct: 71  PDEIRALPCHDVVKGRGGGDCAVCLEELEAGDRCPRLPRCEHSFHAPCVDSWL 123


>ref|XP_003560821.1| PREDICTED: putative RING-H2 finger protein ATL50-like [Brachypodium
           distachyon]
          Length = 181

 Score = 71.2 bits (173), Expect = 1e-10
 Identities = 32/49 (65%), Positives = 34/49 (69%)
 Frame = +2

Query: 11  LAELPCFELKQEAGDECAVCLEKLEAGDCCRRLPACAHVFHARCVDSWL 157
           L  LPC++     GD CAVCLE  EAGD CRRLP C H FHA CVDSWL
Sbjct: 65  LDTLPCYDFDASGGD-CAVCLEAFEAGDRCRRLPRCQHSFHAPCVDSWL 112


>gb|AFW76900.1| putative RING zinc finger domain superfamily protein [Zea mays]
          Length = 172

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 33/53 (62%), Positives = 36/53 (67%), Gaps = 4/53 (7%)
 Frame = +2

Query: 11  LAELPCFELKQEAGD----ECAVCLEKLEAGDCCRRLPACAHVFHARCVDSWL 157
           LA LPC E  + A D    +CAVCLE  EAGD CR+LP C H FHA CVDSWL
Sbjct: 68  LATLPCHEYFKAAADGETGDCAVCLEAFEAGDRCRQLPRCEHSFHAECVDSWL 120


>ref|XP_002438223.1| hypothetical protein SORBIDRAFT_10g009860 [Sorghum bicolor]
           gi|241916446|gb|EER89590.1| hypothetical protein
           SORBIDRAFT_10g009860 [Sorghum bicolor]
          Length = 168

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 32/55 (58%), Positives = 36/55 (65%), Gaps = 3/55 (5%)
 Frame = +2

Query: 2   PELLAELPCFELKQ---EAGDECAVCLEKLEAGDCCRRLPACAHVFHARCVDSWL 157
           P  L  LPC + K    EA  +CAVCLE  +AGD CR+LP C H FHA CVDSWL
Sbjct: 64  PGELVTLPCHDFKAADGEAAGDCAVCLEAFQAGDRCRQLPRCEHCFHAECVDSWL 118


>ref|XP_003572980.1| PREDICTED: E3 ubiquitin-protein ligase ATL23-like [Brachypodium
           distachyon]
          Length = 150

 Score = 70.1 bits (170), Expect = 3e-10
 Identities = 33/52 (63%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
 Frame = +2

Query: 5   ELLAELPCFELKQEA-GDECAVCLEKLEAGDCCRRLPACAHVFHARCVDSWL 157
           E + ELPC + K  A G+ CAVCLE L+AGD CR LP C H FHA+CVDSWL
Sbjct: 52  EEIRELPCQDFKAGATGECCAVCLEALQAGDRCRVLPGCQHGFHAQCVDSWL 103


>ref|XP_004965207.1| PREDICTED: E3 ubiquitin-protein ligase EL5-like [Setaria italica]
          Length = 174

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 32/58 (55%), Positives = 35/58 (60%), Gaps = 9/58 (15%)
 Frame = +2

Query: 11  LAELPCFELKQEAGD---------ECAVCLEKLEAGDCCRRLPACAHVFHARCVDSWL 157
           L  LPC++ K  A D         +CAVCLE  E GD CRRLP C H FHA CVDSWL
Sbjct: 64  LGALPCYDFKAAAADGGGAGTGSGDCAVCLEAFEPGDRCRRLPRCEHSFHAECVDSWL 121


>gb|EMS67164.1| RING-H2 finger protein ATL52 [Triticum urartu]
          Length = 180

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 31/53 (58%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
 Frame = +2

Query: 5   ELLAELPCFELKQEAGD--ECAVCLEKLEAGDCCRRLPACAHVFHARCVDSWL 157
           E +  LPC + K   G   +CAVCLE  E+GD CRRLP C H FHA CVDSWL
Sbjct: 62  EEIETLPCHDFKAAVGGGGDCAVCLEAFESGDRCRRLPRCEHSFHAPCVDSWL 114


>ref|XP_004955191.1| PREDICTED: RING-H2 finger protein ATL51-like [Setaria italica]
          Length = 146

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 30/50 (60%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
 Frame = +2

Query: 11  LAELPCFELKQ-EAGDECAVCLEKLEAGDCCRRLPACAHVFHARCVDSWL 157
           + ELPC + K+   G ECAVCLE   AGD C+ LP C H FHA CVDSWL
Sbjct: 61  VGELPCHKCKEGSGGGECAVCLEAFRAGDRCKVLPGCEHGFHAECVDSWL 110


>ref|XP_004955193.1| PREDICTED: E3 ubiquitin-protein ligase EL5-like [Setaria italica]
          Length = 149

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 32/55 (58%), Positives = 35/55 (63%), Gaps = 4/55 (7%)
 Frame = +2

Query: 5   ELLAELPCFELKQE----AGDECAVCLEKLEAGDCCRRLPACAHVFHARCVDSWL 157
           E + ELPC E K+E     G EC VCLE + AG  CR LP C H FHA CVDSWL
Sbjct: 57  EEVGELPCHEFKEERAGGGGGECVVCLEAILAGARCRVLPRCGHGFHAECVDSWL 111


>ref|XP_004955190.1| PREDICTED: E3 ubiquitin-protein ligase ATL23-like [Setaria italica]
          Length = 181

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 33/53 (62%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
 Frame = +2

Query: 5   ELLAELPCFELKQEA--GDECAVCLEKLEAGDCCRRLPACAHVFHARCVDSWL 157
           E + ELPC E K+ A  G ECAVCLE   AGD  R LP C H FHA CVDSWL
Sbjct: 93  EQVGELPCHECKEGAPVGGECAVCLEAFRAGDRRRVLPGCEHGFHAECVDSWL 145


>ref|XP_002454341.1| hypothetical protein SORBIDRAFT_04g029060 [Sorghum bicolor]
           gi|241934172|gb|EES07317.1| hypothetical protein
           SORBIDRAFT_04g029060 [Sorghum bicolor]
          Length = 157

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 33/58 (56%), Positives = 37/58 (63%), Gaps = 6/58 (10%)
 Frame = +2

Query: 2   PELLAELPCFELKQE------AGDECAVCLEKLEAGDCCRRLPACAHVFHARCVDSWL 157
           PE L ELPC + +        AG ECAVCLE  +AGD CR LP C H FHA+CVD WL
Sbjct: 56  PEDLNELPCHDHECSKAGAGAAGAECAVCLEAFQAGDRCRVLPRCEHGFHAQCVDQWL 113


>ref|NP_001048009.2| Os02g0729900 [Oryza sativa Japonica Group]
           gi|218191508|gb|EEC73935.1| hypothetical protein
           OsI_08799 [Oryza sativa Indica Group]
           gi|222623607|gb|EEE57739.1| hypothetical protein
           OsJ_08253 [Oryza sativa Japonica Group]
           gi|255671228|dbj|BAF09923.2| Os02g0729900 [Oryza sativa
           Japonica Group]
          Length = 145

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 32/51 (62%), Positives = 36/51 (70%)
 Frame = +2

Query: 5   ELLAELPCFELKQEAGDECAVCLEKLEAGDCCRRLPACAHVFHARCVDSWL 157
           E + ELPC  +K+ AG ECAVCLE   AGD  R LP C H FHA+CVDSWL
Sbjct: 59  EQVGELPCHVVKEGAG-ECAVCLEAFRAGDRRRVLPRCEHGFHAQCVDSWL 108


>ref|XP_006647838.1| PREDICTED: E3 ubiquitin-protein ligase ATL23-like [Oryza
           brachyantha]
          Length = 142

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 31/52 (59%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
 Frame = +2

Query: 5   ELLAELPCFELKQEAG-DECAVCLEKLEAGDCCRRLPACAHVFHARCVDSWL 157
           E + ELPC ++++ AG  ECAVCLE   AGD  R LP C H FHA+CVDSWL
Sbjct: 56  EEVGELPCHDVREGAGAGECAVCLEAFRAGDRRRVLPRCEHGFHAQCVDSWL 107


>gb|EMT31307.1| RING-H2 finger protein ATL4J [Aegilops tauschii]
          Length = 107

 Score = 65.5 bits (158), Expect = 7e-09
 Identities = 30/53 (56%), Positives = 37/53 (69%), Gaps = 4/53 (7%)
 Frame = +2

Query: 11  LAELPCFELKQEAGDE----CAVCLEKLEAGDCCRRLPACAHVFHARCVDSWL 157
           +A LP F  +Q   D+    CAVCL +LEAG+  RRLP CAH+FHA CVD+WL
Sbjct: 6   IAALPTFAYEQAQADDAAVDCAVCLGQLEAGEKARRLPKCAHLFHAECVDAWL 58


>ref|XP_004953797.1| PREDICTED: E3 ubiquitin-protein ligase ATL23-like [Setaria italica]
          Length = 178

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 31/54 (57%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
 Frame = +2

Query: 5   ELLAELPCFELKQEAG---DECAVCLEKLEAGDCCRRLPACAHVFHARCVDSWL 157
           E L  LPC + + +AG    ECAVCLE   AGD CR LP C H FHA+CVD WL
Sbjct: 81  EDLNGLPCHDHESKAGAGGGECAVCLEAFRAGDRCRALPGCEHGFHAQCVDPWL 134


Top