BLASTX nr result
ID: Zingiber23_contig00045099
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00045099
(620 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO16994.1| Hypothetical protein [Oryza sativa Japonica Group... 78 2e-12
gb|EEC75008.1| hypothetical protein OsI_11079 [Oryza sativa Indi... 78 2e-12
ref|NP_001049774.1| Os03g0286500 [Oryza sativa Japonica Group] g... 78 2e-12
ref|NP_001136575.1| hypothetical protein [Zea mays] gi|194696232... 76 9e-12
ref|XP_004984828.1| PREDICTED: RNA-binding protein 38-like isofo... 74 3e-11
ref|XP_003561742.1| PREDICTED: uncharacterized protein LOC100843... 72 2e-10
gb|ACF82948.1| unknown [Zea mays] gi|414866250|tpg|DAA44807.1| T... 71 2e-10
ref|XP_004307422.1| PREDICTED: uncharacterized protein LOC101308... 71 3e-10
ref|XP_004984827.1| PREDICTED: RNA-binding protein 38-like isofo... 69 8e-10
gb|EMT07415.1| hypothetical protein F775_22343 [Aegilops tauschii] 69 1e-09
ref|XP_002468050.1| hypothetical protein SORBIDRAFT_01g038700 [S... 69 1e-09
ref|XP_002312040.1| RNA recognition motif-containing family prot... 66 9e-09
ref|XP_002315274.1| RNA recognition motif-containing family prot... 65 1e-08
ref|XP_004237522.1| PREDICTED: uncharacterized protein LOC101251... 64 3e-08
ref|XP_004237521.1| PREDICTED: uncharacterized protein LOC101251... 64 3e-08
gb|EMJ22033.1| hypothetical protein PRUPE_ppa026384mg, partial [... 62 1e-07
ref|XP_006340455.1| PREDICTED: RNA-binding protein 38-like isofo... 62 1e-07
ref|XP_006340454.1| PREDICTED: RNA-binding protein 38-like isofo... 62 1e-07
ref|XP_002523906.1| RNA-binding region-containing protein, putat... 59 1e-06
gb|EOY18527.1| RNA-binding family protein isoform 3 [Theobroma c... 59 1e-06
>gb|AAO16994.1| Hypothetical protein [Oryza sativa Japonica Group]
gi|125585859|gb|EAZ26523.1| hypothetical protein
OsJ_10418 [Oryza sativa Japonica Group]
Length = 339
Score = 77.8 bits (190), Expect = 2e-12
Identities = 66/178 (37%), Positives = 79/178 (44%), Gaps = 48/178 (26%)
Frame = +3
Query: 3 NCNLASLGVK-RA-----------STPSDRAPLPSHGQRRQPPPGMAVGPRG-TPSPSQA 143
NCNLASLG K RA +TP AP QP P +AVG RG +P P
Sbjct: 133 NCNLASLGAKPRAQPPHLLRPSPPATPGPHAPALPSPHHHQPAPAIAVGSRGVSPVP--- 189
Query: 144 AQWYY------XXXXXXXXXFQLH-----HYHNALPFYPAA-AYGFSPRYITDPS---SI 278
WYY + H YH LPFYPAA YG+SP Y+ D S +
Sbjct: 190 --WYYHPSTTPPPPPPPAAHYAAHGGHHQQYHGVLPFYPAATTYGYSPNYVADLSYNAKL 247
Query: 279 GKA------------GHRS--GAAQGGRSSAIGMLPM------HHPAHQGLGIPPPFF 392
G+A GH S AAQGG +A GM+P+ H+ QGLG+P F
Sbjct: 248 GQAAAAHGTNGAYLQGHFSYPAAAQGGMLAANGMMPVYPYYQYHYHGAQGLGVPAAHF 305
>gb|EEC75008.1| hypothetical protein OsI_11079 [Oryza sativa Indica Group]
Length = 454
Score = 77.8 bits (190), Expect = 2e-12
Identities = 66/178 (37%), Positives = 79/178 (44%), Gaps = 48/178 (26%)
Frame = +3
Query: 3 NCNLASLGVK-RA-----------STPSDRAPLPSHGQRRQPPPGMAVGPRG-TPSPSQA 143
NCNLASLG K RA +TP AP QP P +AVG RG +P P
Sbjct: 133 NCNLASLGAKPRAQPPHLLRPSPPATPGPHAPALPSPHHHQPAPAIAVGSRGVSPVP--- 189
Query: 144 AQWYY------XXXXXXXXXFQLH-----HYHNALPFYPAA-AYGFSPRYITDPS---SI 278
WYY + H YH LPFYPAA YG+SP Y+ D S +
Sbjct: 190 --WYYHPSTTPPPPPPPAAHYAAHGGHHQQYHGVLPFYPAATTYGYSPNYVADLSYNAKL 247
Query: 279 GKA------------GHRS--GAAQGGRSSAIGMLPM------HHPAHQGLGIPPPFF 392
G+A GH S AAQGG +A GM+P+ H+ QGLG+P F
Sbjct: 248 GQAAAAHGTNGAYLQGHFSYPAAAQGGMLAANGMMPVYPYYQYHYHGAQGLGVPAAHF 305
>ref|NP_001049774.1| Os03g0286500 [Oryza sativa Japonica Group]
gi|108707565|gb|ABF95360.1| RNA recognition motif family
protein, expressed [Oryza sativa Japonica Group]
gi|113548245|dbj|BAF11688.1| Os03g0286500 [Oryza sativa
Japonica Group]
Length = 310
Score = 77.8 bits (190), Expect = 2e-12
Identities = 66/178 (37%), Positives = 79/178 (44%), Gaps = 48/178 (26%)
Frame = +3
Query: 3 NCNLASLGVK-RA-----------STPSDRAPLPSHGQRRQPPPGMAVGPRG-TPSPSQA 143
NCNLASLG K RA +TP AP QP P +AVG RG +P P
Sbjct: 104 NCNLASLGAKPRAQPPHLLRPSPPATPGPHAPALPSPHHHQPAPAIAVGSRGVSPVP--- 160
Query: 144 AQWYY------XXXXXXXXXFQLH-----HYHNALPFYPAA-AYGFSPRYITDPS---SI 278
WYY + H YH LPFYPAA YG+SP Y+ D S +
Sbjct: 161 --WYYHPSTTPPPPPPPAAHYAAHGGHHQQYHGVLPFYPAATTYGYSPNYVADLSYNAKL 218
Query: 279 GKA------------GHRS--GAAQGGRSSAIGMLPM------HHPAHQGLGIPPPFF 392
G+A GH S AAQGG +A GM+P+ H+ QGLG+P F
Sbjct: 219 GQAAAAHGTNGAYLQGHFSYPAAAQGGMLAANGMMPVYPYYQYHYHGAQGLGVPAAHF 276
>ref|NP_001136575.1| hypothetical protein [Zea mays] gi|194696232|gb|ACF82200.1| unknown
[Zea mays] gi|413956076|gb|AFW88725.1| hypothetical
protein ZEAMMB73_158124 [Zea mays]
Length = 279
Score = 75.9 bits (185), Expect = 9e-12
Identities = 60/162 (37%), Positives = 70/162 (43%), Gaps = 32/162 (19%)
Frame = +3
Query: 3 NCNLASLGVKRASTPSDRA--PLPSHGQR----RQPPPGMAVGPRG-TPSPSQAAQWYYX 161
NCNLASLG K P P P H QP P +AVG R +P P WYY
Sbjct: 96 NCNLASLGAKPRPQPLQHVLRPSPPHAHALPSPHQPTPAIAVGSRSVSPVP-----WYYH 150
Query: 162 XXXXXXXXFQLHH--YHNALPFYPAAA-YGFSPRYITDPSSIGKAGHRSGAAQGGRS--- 323
H YH LPFYPAAA YG+SP Y+TD S K G + A S
Sbjct: 151 PSTTRPPPPPAAHQQYHGVLPFYPAAATYGYSPNYVTDLSYNTKVGQAAAAGTAAGSYLQ 210
Query: 324 -----------SAIGMLPM----HHPAH----QGLGIPPPFF 392
+ GM+P+ H+P H QGLG+P F
Sbjct: 211 LQGHLAYQAAPAQGGMVPVYPFYHYPYHASHSQGLGVPAAHF 252
>ref|XP_004984828.1| PREDICTED: RNA-binding protein 38-like isoform X2 [Setaria italica]
Length = 303
Score = 73.9 bits (180), Expect = 3e-11
Identities = 63/175 (36%), Positives = 75/175 (42%), Gaps = 45/175 (25%)
Frame = +3
Query: 3 NCNLASLGVK---------RASTPSDRAP-LPSHGQRRQPPPGMAVGPRG-TPSPSQAAQ 149
NCNLASLG K R S P+ AP P+ QP P +AVG RG +P P
Sbjct: 99 NCNLASLGAKPRPQPPHLLRPSPPATPAPHAPALPSPHQPAPAIAVGSRGVSPVP----- 153
Query: 150 WYYXXXXXXXXX------FQLH----HYHNALPFYPAAA-YGFSPRYITDPSSIGKAGHR 296
WYY H YH LPFYPAA YG+SP Y+ D S K G
Sbjct: 154 WYYHPSTTPPPPPPPPAAHYAHGAHQQYHGVLPFYPAATTYGYSPNYVADLSYNAKLGQA 213
Query: 297 SG-----------------AAQGGRSSAIGMLPM----HHPAH--QGLGIPPPFF 392
+ AAQGG + GM+P+ H+ H QGLG+P F
Sbjct: 214 AAAAAGTAGSYMQGHFTYPAAQGGMVAPNGMMPVYPFYHYQYHGSQGLGVPAAHF 268
>ref|XP_003561742.1| PREDICTED: uncharacterized protein LOC100843530 [Brachypodium
distachyon]
Length = 307
Score = 71.6 bits (174), Expect = 2e-10
Identities = 61/188 (32%), Positives = 73/188 (38%), Gaps = 58/188 (30%)
Frame = +3
Query: 3 NCNLASLGVK-----------RASTPSDRAP----LPSHGQR--RQPPPGMAVGPRG-TP 128
NCNLASLG K R S P+ AP P HG +QP P + G RG +P
Sbjct: 91 NCNLASLGAKPRTQQQQPHLLRPSPPATPAPHMPAAPHHGHHHHQQPAPAIVAGSRGMSP 150
Query: 129 SPSQAAQWYYXXXXXXXXX--------------FQLHHYHNALPFYPAAA-YGFSPRYIT 263
P WYY H YH LPFYPAA YG+SP Y+
Sbjct: 151 VP-----WYYHPSTTPPPPPPPPQAPAHYGHGAHPQHQYHGVLPFYPAATNYGYSPNYVA 205
Query: 264 DPSSIGKAGH-------------------RSGAAQGGRSSAIGMLPM------HHPAHQG 368
D S K G + AAQGG + M+P+ H+ QG
Sbjct: 206 DLSYNAKLGQTAAAPGAAGSYMQGHFPYPAAAAAQGGMLAPNAMMPVYPYYQYHYHGAQG 265
Query: 369 LGIPPPFF 392
LG+P F
Sbjct: 266 LGVPAAHF 273
>gb|ACF82948.1| unknown [Zea mays] gi|414866250|tpg|DAA44807.1| TPA: hypothetical
protein ZEAMMB73_243908 [Zea mays]
Length = 297
Score = 71.2 bits (173), Expect = 2e-10
Identities = 48/124 (38%), Positives = 59/124 (47%), Gaps = 19/124 (15%)
Frame = +3
Query: 3 NCNLASLGVK--------RASTPSDRAP-LPSHGQRRQPPPGMAVGPRG-TPSPSQAAQW 152
NCNLA+LG K R S P+ AP P+ + QP P +AVG RG +P P W
Sbjct: 97 NCNLAALGAKPRPPPHILRPSPPATPAPHAPALPSQHQPTPAIAVGSRGVSPVP-----W 151
Query: 153 YYXXXXXXXXXFQLHH-------YHNALPFYPAAA--YGFSPRYITDPSSIGKAGHRSGA 305
YY H+ YH LPFYPAAA YG++P Y+ D S K G +
Sbjct: 152 YYHPSTTPPPPAAHHYAHGAHQQYHGVLPFYPAAAATYGYAPNYVADLSYNAKVGQAAAG 211
Query: 306 AQGG 317
GG
Sbjct: 212 GTGG 215
>ref|XP_004307422.1| PREDICTED: uncharacterized protein LOC101308509 [Fragaria vesca
subsp. vesca]
Length = 257
Score = 70.9 bits (172), Expect = 3e-10
Identities = 48/150 (32%), Positives = 66/150 (44%), Gaps = 20/150 (13%)
Frame = +3
Query: 3 NCNLASLGVKRASTPSDRAPLPSHGQRRQPPPGMAVGPRGTPSPSQAAQWYYXXXXXXXX 182
NCNLASLG +R + S P P G R ++ P P+P+ QWYY
Sbjct: 87 NCNLASLGARRPRSASTTTPPPQRGAR-------SMSPAPAPAPANHVQWYYPAGTPAAA 139
Query: 183 XFQLHH-YHNALPFYPAAAYGFSPRYI-TDPSSIGKAGHRSGAA---------------- 308
HH +H A+PF YG+SP YI TD K G+ +G
Sbjct: 140 SVPFHHQHHQAVPF-----YGYSPTYIATDMGYNHKLGYSTGGGYMNGHYSPQVYHSHQP 194
Query: 309 QGGRSSAIGMLPMHHPAHQG--LGIPPPFF 392
G ++ + M P++H HQ +G+P FF
Sbjct: 195 MVGPNTLMPMYPLYHYHHQSHTMGLPAQFF 224
>ref|XP_004984827.1| PREDICTED: RNA-binding protein 38-like isoform X1 [Setaria italica]
Length = 304
Score = 69.3 bits (168), Expect = 8e-10
Identities = 63/176 (35%), Positives = 75/176 (42%), Gaps = 46/176 (26%)
Frame = +3
Query: 3 NCNLASLGVK---------RASTPSDRAP-LPSHGQRRQPPPG-MAVGPRG-TPSPSQAA 146
NCNLASLG K R S P+ AP P+ QP P +AVG RG +P P
Sbjct: 99 NCNLASLGAKPRPQPPHLLRPSPPATPAPHAPALPSPHQPAPAAIAVGSRGVSPVP---- 154
Query: 147 QWYYXXXXXXXXX------FQLH----HYHNALPFYPAAA-YGFSPRYITDPSSIGKAGH 293
WYY H YH LPFYPAA YG+SP Y+ D S K G
Sbjct: 155 -WYYHPSTTPPPPPPPPAAHYAHGAHQQYHGVLPFYPAATTYGYSPNYVADLSYNAKLGQ 213
Query: 294 RSG-----------------AAQGGRSSAIGMLPM----HHPAH--QGLGIPPPFF 392
+ AAQGG + GM+P+ H+ H QGLG+P F
Sbjct: 214 AAAAAAGTAGSYMQGHFTYPAAQGGMVAPNGMMPVYPFYHYQYHGSQGLGVPAAHF 269
>gb|EMT07415.1| hypothetical protein F775_22343 [Aegilops tauschii]
Length = 229
Score = 68.9 bits (167), Expect = 1e-09
Identities = 64/177 (36%), Positives = 77/177 (43%), Gaps = 47/177 (26%)
Frame = +3
Query: 3 NCNLASLGVK---------RASTPSDRAP-----LPS-HGQRRQ---PPPGMAVGPRGTP 128
NCNLASLG K R S P+ AP LPS H QR + P P P
Sbjct: 29 NCNLASLGAKPRPQPPHLLRPSPPTTPAPHHMPALPSPHHQRARGVSPVPWYYHPSTTPP 88
Query: 129 SPSQAAQWYYXXXXXXXXXFQLHHYHNALPFYPAAA-YGFSPRYITDPS----SIGKA-- 287
P QAA + + YH LPFYPAAA YG+SP Y+TD S +G+A
Sbjct: 89 PPPQAAHYGHGAH---------QQYHGVLPFYPAAANYGYSPNYVTDLSYNAQKLGQAAA 139
Query: 288 -------------GHRS---GAAQGGRSSAIGMLPM------HHPAHQGLGIPPPFF 392
GH S AA GG + GM+P+ H+ QGLG+P F
Sbjct: 140 TAPGAGGSYMQPQGHFSYPAAAAHGGMLAPNGMMPVYPYYHYHYHGSQGLGVPAAHF 196
>ref|XP_002468050.1| hypothetical protein SORBIDRAFT_01g038700 [Sorghum bicolor]
gi|241921904|gb|EER95048.1| hypothetical protein
SORBIDRAFT_01g038700 [Sorghum bicolor]
Length = 310
Score = 68.6 bits (166), Expect = 1e-09
Identities = 64/180 (35%), Positives = 73/180 (40%), Gaps = 50/180 (27%)
Frame = +3
Query: 3 NCNLASLGVK-RASTPSDRAPLPS-------HGQR----RQPPPGMAVGPRG-TPSPSQA 143
NCNLASLG K R P P PS H QP P +AVG RG +P P
Sbjct: 101 NCNLASLGAKPRPQPPHILRPGPSPPATPAPHAHALPSPHQPTPAIAVGSRGVSPVP--- 157
Query: 144 AQWYYXXXXXXXXX-----FQLH----HYHNALPFYPAAA-YGFSPRYITDPSSIGKAGH 293
WYY H YH LPFYPAA YG+SP Y+ D S K G
Sbjct: 158 --WYYHPSTTPPPPPPPAAHYAHGAHQQYHGVLPFYPAATTYGYSPNYVADLSYNAKLGQ 215
Query: 294 RS------------------GAAQGGRSSAI--GMLPM-------HHPAHQGLGIPPPFF 392
+ AAQGG A GM+P+ +H A QGLG+P F
Sbjct: 216 AAAGGTAGSYLQPQGHFAYPAAAQGGMHVAAPNGMMPVYPFYHYQYHHASQGLGVPAAHF 275
>ref|XP_002312040.1| RNA recognition motif-containing family protein [Populus
trichocarpa] gi|222851860|gb|EEE89407.1| RNA recognition
motif-containing family protein [Populus trichocarpa]
Length = 251
Score = 65.9 bits (159), Expect = 9e-09
Identities = 52/142 (36%), Positives = 66/142 (46%), Gaps = 16/142 (11%)
Frame = +3
Query: 3 NCNLASLGVKRASTPSDRAPLPSHGQRRQPPPGMAVGPRGTPS-PSQAAQWYYXXXXXXX 179
NCNLASLG +R P P P Q P + GPR TP+ P+ QWYY
Sbjct: 87 NCNLASLGARR---PRSSTPAPP-----QQGPNIIAGPRSTPAPPANHVQWYYPAGSAAA 138
Query: 180 XXFQLHHYHNALPFYPAAAYGFSPRYI-TDPSSIGKA---------GHRS----GAAQGG 317
F H +H A+PF YG+SP YI TD S K GH S G A G
Sbjct: 139 SPFH-HQHHQAVPF-----YGYSPAYIATDISYNHKLSYTGGSYMNGHFSQVYPGQAMVG 192
Query: 318 RSSAIGMLPMHH-PAHQGLGIP 380
++ + M P++H Q +G+P
Sbjct: 193 ANTLMPMYPLYHFHQSQAVGLP 214
>ref|XP_002315274.1| RNA recognition motif-containing family protein [Populus
trichocarpa] gi|118481097|gb|ABK92502.1| unknown
[Populus trichocarpa] gi|222864314|gb|EEF01445.1| RNA
recognition motif-containing family protein [Populus
trichocarpa]
Length = 253
Score = 65.5 bits (158), Expect = 1e-08
Identities = 48/142 (33%), Positives = 62/142 (43%), Gaps = 16/142 (11%)
Frame = +3
Query: 3 NCNLASLGVKRASTPSDRAPLPSHGQRRQPPPGMAVGPRGTP-SPSQAAQWYYXXXXXXX 179
NCNLASLG +R P P P Q P + GPR TP +P+ QWYY
Sbjct: 88 NCNLASLGARR---PRSATPAPP-----QQGPNINAGPRSTPAAPANHVQWYYPAGSAAA 139
Query: 180 XXFQLHHYHNALPFYPAAAYGFSPRYI-TDPSSIGKAGHRSGAAQGGRSSAI-------- 332
H +H A+PF YG+SP YI TD S K + G+ G S +
Sbjct: 140 ASPFHHQHHQAVPF-----YGYSPAYIATDTSGNHKLNYTGGSYMNGHFSQVYPGQAMVG 194
Query: 333 --GMLPM----HHPAHQGLGIP 380
++PM H Q +G+P
Sbjct: 195 ANTLMPMYPFYHFHQSQAMGLP 216
>ref|XP_004237522.1| PREDICTED: uncharacterized protein LOC101251083 isoform 2 [Solanum
lycopersicum]
Length = 241
Score = 64.3 bits (155), Expect = 3e-08
Identities = 47/130 (36%), Positives = 60/130 (46%), Gaps = 9/130 (6%)
Frame = +3
Query: 3 NCNLASLGVKRASTPSDRAPLPSHGQRRQPPPGM---AVGPR-GTPSPSQAAQWYYXXXX 170
NCNLASLG +R+ P PS PPP VG R + SP+ QWYY
Sbjct: 83 NCNLASLGARRS------RPSPSITPPPPPPPQQGPNVVGARANSASPASHVQWYYPQAA 136
Query: 171 XXXXXFQLHHYHNALPFYPAAAYGFSPRYI-TDPSSIGKAGHRSGAAQGGRSSAI----G 335
F H+H LPF YG+SP YI TD + K + G G S +
Sbjct: 137 PPASPF---HHHQPLPF-----YGYSPAYIATDMNYNHKVSYNGGGYVNGHFSQVYPGQA 188
Query: 336 MLPMHHPAHQ 365
M+P++HP +Q
Sbjct: 189 MMPVYHPYYQ 198
>ref|XP_004237521.1| PREDICTED: uncharacterized protein LOC101251083 isoform 1 [Solanum
lycopersicum]
Length = 250
Score = 64.3 bits (155), Expect = 3e-08
Identities = 47/130 (36%), Positives = 60/130 (46%), Gaps = 9/130 (6%)
Frame = +3
Query: 3 NCNLASLGVKRASTPSDRAPLPSHGQRRQPPPGM---AVGPR-GTPSPSQAAQWYYXXXX 170
NCNLASLG +R+ P PS PPP VG R + SP+ QWYY
Sbjct: 83 NCNLASLGARRS------RPSPSITPPPPPPPQQGPNVVGARANSASPASHVQWYYPQAA 136
Query: 171 XXXXXFQLHHYHNALPFYPAAAYGFSPRYI-TDPSSIGKAGHRSGAAQGGRSSAI----G 335
F H+H LPF YG+SP YI TD + K + G G S +
Sbjct: 137 PPASPF---HHHQPLPF-----YGYSPAYIATDMNYNHKVSYNGGGYVNGHFSQVYPGQA 188
Query: 336 MLPMHHPAHQ 365
M+P++HP +Q
Sbjct: 189 MMPVYHPYYQ 198
>gb|EMJ22033.1| hypothetical protein PRUPE_ppa026384mg, partial [Prunus persica]
Length = 253
Score = 62.4 bits (150), Expect = 1e-07
Identities = 47/151 (31%), Positives = 63/151 (41%), Gaps = 21/151 (13%)
Frame = +3
Query: 3 NCNLASLGVKRASTPSDRAPLPSHGQRRQPPPGMAVGPRG----TPSPSQAAQWYYXXXX 170
NCNLASLG +R + S P P PPP G +P+P+ QWYY
Sbjct: 89 NCNLASLGARRPRSASTTTPPP------PPPPQRGSNGGGARSMSPAPANHVQWYYPAPA 142
Query: 171 XXXXXFQLHHYHNALPFYPAAAYGFSPRYI-TDPSSIGKAGHRSGAAQGGR--------- 320
H +H +PF YG+SP YI D S K G+ GA G
Sbjct: 143 GTPATPFHHQHHQPVPF-----YGYSPTYIAADISYNHKLGYTGGAYMNGHYSPQVYPGQ 197
Query: 321 -----SSAIGMLPMHHPAHQG--LGIPPPFF 392
++ + M P++H HQ +G+P F
Sbjct: 198 PMVGPNTLMPMYPLYHYHHQSHTMGLPAHIF 228
>ref|XP_006340455.1| PREDICTED: RNA-binding protein 38-like isoform X2 [Solanum
tuberosum]
Length = 253
Score = 62.0 bits (149), Expect = 1e-07
Identities = 51/144 (35%), Positives = 63/144 (43%), Gaps = 18/144 (12%)
Frame = +3
Query: 3 NCNLASLGVKRASTPSDRAPLPSHGQRRQPPP---GMAVGPR-GTPSPSQAAQWYY---- 158
NCNLASLG +R S PS P PPP VGPR + SP+ QWYY
Sbjct: 88 NCNLASLGARR-SRPSPSITPP-------PPPQQGANVVGPRANSASPASHVQWYYPAAA 139
Query: 159 XXXXXXXXXFQLHHYHNALPFYPAAAYGFSPRYI-TDPSSIGKAGHRSGAAQGGRSSAI- 332
F H+H LPF YG+SP YI TD + K + G G S +
Sbjct: 140 PQAAAPASPFHHQHHHQPLPF-----YGYSPAYIATDVNYNHKVSYNGGGYMNGHFSQVY 194
Query: 333 ---GMLPMH-----HPAHQGLGIP 380
M+PM+ H Q +G+P
Sbjct: 195 PSQAMMPMYPYYHFHHQSQTMGLP 218
>ref|XP_006340454.1| PREDICTED: RNA-binding protein 38-like isoform X1 [Solanum
tuberosum]
Length = 262
Score = 62.0 bits (149), Expect = 1e-07
Identities = 51/144 (35%), Positives = 63/144 (43%), Gaps = 18/144 (12%)
Frame = +3
Query: 3 NCNLASLGVKRASTPSDRAPLPSHGQRRQPPP---GMAVGPR-GTPSPSQAAQWYY---- 158
NCNLASLG +R S PS P PPP VGPR + SP+ QWYY
Sbjct: 88 NCNLASLGARR-SRPSPSITPP-------PPPQQGANVVGPRANSASPASHVQWYYPAAA 139
Query: 159 XXXXXXXXXFQLHHYHNALPFYPAAAYGFSPRYI-TDPSSIGKAGHRSGAAQGGRSSAI- 332
F H+H LPF YG+SP YI TD + K + G G S +
Sbjct: 140 PQAAAPASPFHHQHHHQPLPF-----YGYSPAYIATDVNYNHKVSYNGGGYMNGHFSQVY 194
Query: 333 ---GMLPMH-----HPAHQGLGIP 380
M+PM+ H Q +G+P
Sbjct: 195 PSQAMMPMYPYYHFHHQSQTMGLP 218
>ref|XP_002523906.1| RNA-binding region-containing protein, putative [Ricinus communis]
gi|223536836|gb|EEF38475.1| RNA-binding
region-containing protein, putative [Ricinus communis]
Length = 256
Score = 58.9 bits (141), Expect = 1e-06
Identities = 45/146 (30%), Positives = 65/146 (44%), Gaps = 16/146 (10%)
Frame = +3
Query: 3 NCNLASLGVKRASTPSDRAPLPSHGQRRQPPPGMAVGPR-GTPSPSQAAQWYYXXXXXXX 179
NCNLASLG +R + + +AP P P G G R + +P+ QWYY
Sbjct: 87 NCNLASLGARRPRSAT-QAPPPQPPPPPPPQQGSNHGQRPSSAAPANHVQWYYPAGSPAS 145
Query: 180 XXFQLHHYHNALPFYPAAAYGFSPRYI-TDPSSIGKAGHRSGAAQGGRSSAI-------- 332
+ HH+H A+PF YG++P Y+ TD S K + G+ G S +
Sbjct: 146 P-YHHHHHHQAVPF-----YGYTPTYVATDISYNHKLSYTGGSYMNGHFSQVYPGQAIMG 199
Query: 333 --GMLPM----HHPAHQGLGIPPPFF 392
++PM H Q +G+P F
Sbjct: 200 ANTLMPMYPLYHFHQSQTMGLPAHIF 225
>gb|EOY18527.1| RNA-binding family protein isoform 3 [Theobroma cacao]
Length = 254
Score = 58.5 bits (140), Expect = 1e-06
Identities = 46/146 (31%), Positives = 60/146 (41%), Gaps = 16/146 (10%)
Frame = +3
Query: 3 NCNLASLGVKRASTPSDRAPLPSHGQRRQPPPGMAVGPR-GTPSPSQAAQWYYXXXXXXX 179
NCNLASLG +R P PP G VGPR + +P+ QWYY
Sbjct: 87 NCNLASLGARR----------PRSASAAPPPQGSNVGPRAASAAPANPVQWYYPAGTPAS 136
Query: 180 XXFQLHHYHNALPFYPAAAYGFSPRYI-TDPSSIGKAGHRSGAAQGGRSSAI-------- 332
H +H A+PF YG+SP YI D S K + G G S +
Sbjct: 137 PFH--HQHHQAVPF-----YGYSPAYIAADISYNHKLSYTGGTYMNGPFSQVYPGQALVG 189
Query: 333 --GMLPM----HHPAHQGLGIPPPFF 392
++PM H+ Q +G+P F
Sbjct: 190 ANTLMPMYPFYHYHQSQTMGLPAHVF 215