BLASTX nr result

ID: Zingiber23_contig00044774 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00044774
         (690 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279830.1| PREDICTED: uncharacterized protein LOC100245...    56   6e-06
ref|XP_002307796.2| hypothetical protein POPTR_0005s27360g [Popu...    57   7e-06

>ref|XP_002279830.1| PREDICTED: uncharacterized protein LOC100245230 [Vitis vinifera]
          Length = 750

 Score = 55.8 bits (133), Expect(2) = 6e-06
 Identities = 56/188 (29%), Positives = 80/188 (42%), Gaps = 21/188 (11%)
 Frame = -3

Query: 649  SGSSEDPLPVRGPNGSISLVNNCSTKTIPSKVLRQNQNPE-MQPIINGLNSACDVNSVSE 473
            SGS+E  + +   +G  S++N+ +    P    + +Q P  + P +NG N A   N  ++
Sbjct: 568  SGSTEASIGLNAQSG-FSILNSSAGAVRPRPPFQIHQGPTALHPGMNGFNGAYGFNIPTQ 626

Query: 472  FGK---MARPAGIPSGHFDSDALVKNANVAHAQDFDMLPKSSSNNLAHTSAGRQPSTDD- 305
             GK    ARP G               N+   Q  D + +++ N   H   G   + +D 
Sbjct: 627  MGKPMGAARPTGF--------------NLQAPQMLDAISRTTPN-FGHPGMGNNLTPEDP 671

Query: 304  -----SIKTNSSSSL-PDPGKGSKC----------SLQGVTVLPTLDSSPPDLNVGFQPP 173
                 S  TNSSS L P PG  +            S  G+      DS PPDLNV FQ P
Sbjct: 672  KFLEKSTTTNSSSPLLPHPGGEAAAAPRVGPHPQPSWPGLPPQQRQDSVPPDLNVRFQSP 731

Query: 172  GSSASGVV 149
            GS +S  V
Sbjct: 732  GSPSSSKV 739



 Score = 20.8 bits (42), Expect(2) = 6e-06
 Identities = 9/10 (90%), Positives = 9/10 (90%)
 Frame = -2

Query: 143 SKQPDLALQL 114
           S QPDLALQL
Sbjct: 741 STQPDLALQL 750


>ref|XP_002307796.2| hypothetical protein POPTR_0005s27360g [Populus trichocarpa]
            gi|550339853|gb|EEE94792.2| hypothetical protein
            POPTR_0005s27360g [Populus trichocarpa]
          Length = 693

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 65/204 (31%), Positives = 98/204 (48%), Gaps = 25/204 (12%)
 Frame = -3

Query: 682  QPASSVAPNAISGSSEDPLPVRGPNGS---ISLVNNCS--TKTIPSKVLRQNQNPEMQPI 518
            QPA+S++ +A + + ED L   G   S   ++ +N+ +   K++P+  ++Q   P + P 
Sbjct: 491  QPATSLSRDA-TWTKEDMLETVGGLNSKNELTTLNSATGGMKSLPTVSIQQK--PMIHPD 547

Query: 517  INGLNSACDVNSVSEFGKMARPAGIPSGHFDSDALVKNANVAHAQDFDMLPKSSS----- 353
            +NG +     NS S+ G +A     P+G F   +L K      +Q F  +P S+S     
Sbjct: 548  MNGFSGGFGYNSSSQIGTVA-----PTGKF---SLEKLHPAVPSQMFGAVPPSNSTFISM 599

Query: 352  --NNL-------AHTSAGRQPSTDDSIKTNSSSS--LPDPGKGSKCSLQGVTVLPTLDSS 206
              NNL       + TS+G   S   +   +SS S  L + G G K S QG   LP     
Sbjct: 600  PGNNLNSNKAMLSETSSGLLQSGISAAVGSSSDSHTLRNVGFGGKSSWQGF--LPYHQQG 657

Query: 205  ----PPDLNVGFQPPGSSASGVVV 146
                PPDLNVGF  PGS +S V +
Sbjct: 658  TVPFPPDLNVGFMAPGSPSSSVPI 681


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