BLASTX nr result
ID: Zingiber23_contig00044712
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00044712
(334 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CCI55279.1| PH01B001G05.2 [Phyllostachys edulis] 154 1e-35
emb|CAH67397.1| H0115B09.9 [Oryza sativa Indica Group] 147 1e-33
emb|CAD41263.1| OSJNBb0103I08.2 [Oryza sativa Japonica Group] gi... 147 1e-33
gb|ABA95229.1| retrotransposon protein, putative, Ty3-gypsy subc... 146 2e-33
gb|AAT07561.1| putative polyprotein [Oryza sativa Japonica Group... 146 3e-33
gb|AAL75984.1|AF466203_13 putative prpol [Zea mays] 144 1e-32
gb|AAL75983.1|AF466203_12 putative gag-pol precursor -orf2 [Zea ... 144 1e-32
gb|AAK27822.1|AC022457_25 putative gag-pol precursor [Oryza sati... 142 6e-32
gb|AAL75982.1|AF466203_11 putative prpol [Zea mays] 142 6e-32
emb|CAE05173.2| OSJNBa0013A04.10 [Oryza sativa Japonica Group] 142 6e-32
gb|AAP54205.2| retrotransposon protein, putative, Ty3-gypsy subc... 142 6e-32
gb|ABF96344.1| retrotransposon protein, putative, unclassified [... 142 6e-32
gb|AAR06355.1| putative polyprotein [Oryza sativa Japonica Group] 142 6e-32
dbj|BAB40833.1| reverse transcriptase [Spinacia oleracea] 141 8e-32
emb|CAD40020.2| OSJNBa0052O21.5 [Oryza sativa Japonica Group] 141 8e-32
gb|ABA96681.1| retrotransposon protein, putative, unclassified [... 141 1e-31
gb|ABA94864.1| retrotransposon protein, putative, unclassified [... 141 1e-31
gb|AAL66751.1|AF464738_2 putative gag-pol precursor [Zea mays] g... 141 1e-31
emb|CAH66285.1| OSIGBa0161P06.2 [Oryza sativa Indica Group] 141 1e-31
gb|ABF98055.1| retrotransposon protein, putative, unclassified [... 141 1e-31
>emb|CCI55279.1| PH01B001G05.2 [Phyllostachys edulis]
Length = 2097
Score = 154 bits (389), Expect = 1e-35
Identities = 67/110 (60%), Positives = 86/110 (78%)
Frame = +3
Query: 3 AGCELICMLDAYQGYHQVPLAREDQEKVSFVTADGTYCYNVMPFGLKNAGATYQRLMNKV 182
+GCEL+ LDAY GYHQ+ + +ED+EK SF+T GTYCY MPFGLKNAGAT+QRLM K
Sbjct: 1153 SGCELLSFLDAYSGYHQISMCKEDEEKTSFITPYGTYCYIKMPFGLKNAGATFQRLMQKT 1212
Query: 183 FREQIGRNLEVYVDDILIKSVRAADLFKDMEETFRTLRKYGVKLNPQKCL 332
F QIGRNLE YVDD+++K+ A D D++ETF LR++ +KLNP+KC+
Sbjct: 1213 FSPQIGRNLEAYVDDLVVKNTNAGDHIPDLQETFNNLRRHNLKLNPEKCV 1262
>emb|CAH67397.1| H0115B09.9 [Oryza sativa Indica Group]
Length = 943
Score = 147 bits (372), Expect = 1e-33
Identities = 68/110 (61%), Positives = 86/110 (78%)
Frame = +3
Query: 3 AGCELICMLDAYQGYHQVPLAREDQEKVSFVTADGTYCYNVMPFGLKNAGATYQRLMNKV 182
A CEL+ LDAY GYHQV + +ED+EK SF+T GTYC+ MPFGLKNAGAT+ RL+ KV
Sbjct: 75 ASCELMSFLDAYSGYHQVFMMKEDEEKTSFITPFGTYCFIRMPFGLKNAGATFARLIGKV 134
Query: 183 FREQIGRNLEVYVDDILIKSVRAADLFKDMEETFRTLRKYGVKLNPQKCL 332
+Q+GRN+E YVDDI++KS +A KD++ETF LRKY VKLNP+KC+
Sbjct: 135 LAKQLGRNVEAYVDDIVVKSKQAFSHGKDLQETFENLRKYSVKLNPEKCV 184
>emb|CAD41263.1| OSJNBb0103I08.2 [Oryza sativa Japonica Group]
gi|38344987|emb|CAE02793.2| OSJNBa0011L07.17 [Oryza
sativa Japonica Group]
Length = 943
Score = 147 bits (372), Expect = 1e-33
Identities = 68/110 (61%), Positives = 86/110 (78%)
Frame = +3
Query: 3 AGCELICMLDAYQGYHQVPLAREDQEKVSFVTADGTYCYNVMPFGLKNAGATYQRLMNKV 182
A CEL+ LDAY GYHQV + +ED+EK SF+T GTYC+ MPFGLKNAGAT+ RL+ KV
Sbjct: 75 ASCELMSFLDAYSGYHQVFMMKEDEEKTSFITPFGTYCFIRMPFGLKNAGATFARLIGKV 134
Query: 183 FREQIGRNLEVYVDDILIKSVRAADLFKDMEETFRTLRKYGVKLNPQKCL 332
+Q+GRN+E YVDDI++KS +A KD++ETF LRKY VKLNP+KC+
Sbjct: 135 LAKQLGRNVEAYVDDIVVKSKQAFSHGKDLQETFENLRKYSVKLNPEKCV 184
>gb|ABA95229.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1980
Score = 146 bits (369), Expect = 2e-33
Identities = 68/110 (61%), Positives = 86/110 (78%)
Frame = +3
Query: 3 AGCELICMLDAYQGYHQVPLAREDQEKVSFVTADGTYCYNVMPFGLKNAGATYQRLMNKV 182
AGCEL+ LDAY GYHQV + +ED+EK SF+T GTYC+ MPFGLKNAGAT+ RL+ KV
Sbjct: 1069 AGCELMSFLDAYSGYHQVFMVKEDEEKTSFITPFGTYCFIRMPFGLKNAGATFARLIGKV 1128
Query: 183 FREQIGRNLEVYVDDILIKSVRAADLFKDMEETFRTLRKYGVKLNPQKCL 332
+Q+GRN+E YVDDI++KS +A KD++ETF LRK VKLNP+KC+
Sbjct: 1129 LAKQLGRNVEAYVDDIVVKSKQAFTHGKDLQETFENLRKCSVKLNPEKCV 1178
>gb|AAT07561.1| putative polyprotein [Oryza sativa Japonica Group]
gi|46981311|gb|AAT07629.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1459
Score = 146 bits (368), Expect = 3e-33
Identities = 68/110 (61%), Positives = 85/110 (77%)
Frame = +3
Query: 3 AGCELICMLDAYQGYHQVPLAREDQEKVSFVTADGTYCYNVMPFGLKNAGATYQRLMNKV 182
AGCEL+ LDAY GYHQV + +ED+EK S +T GTYCY MPFGLKNAGAT+ RL+ KV
Sbjct: 547 AGCELMSFLDAYSGYHQVFMVKEDEEKPSLITPFGTYCYIRMPFGLKNAGATFARLICKV 606
Query: 183 FREQIGRNLEVYVDDILIKSVRAADLFKDMEETFRTLRKYGVKLNPQKCL 332
Q+GRN+E YVDDI++KS +A KD++ETF LRK+ VKLNP+KC+
Sbjct: 607 LANQLGRNVEAYVDDIVVKSKKAFTHGKDLQETFENLRKFSVKLNPEKCM 656
>gb|AAL75984.1|AF466203_13 putative prpol [Zea mays]
Length = 1850
Score = 144 bits (363), Expect = 1e-32
Identities = 66/110 (60%), Positives = 81/110 (73%)
Frame = +3
Query: 3 AGCELICMLDAYQGYHQVPLAREDQEKVSFVTADGTYCYNVMPFGLKNAGATYQRLMNKV 182
AGCE + LDAY GYHQ+ + DQ SF+T G YCY MPFGL+NAGATYQR MN V
Sbjct: 1088 AGCETLSFLDAYSGYHQIRMKESDQLATSFITPFGMYCYVTMPFGLRNAGATYQRCMNHV 1147
Query: 183 FREQIGRNLEVYVDDILIKSVRAADLFKDMEETFRTLRKYGVKLNPQKCL 332
F E IGR +E YVDDI++K+ +A+DL D+E TFR L+ GVKLNP+KC+
Sbjct: 1148 FGEHIGRTVEAYVDDIVVKTRKASDLLSDLEVTFRCLKAKGVKLNPEKCV 1197
>gb|AAL75983.1|AF466203_12 putative gag-pol precursor -orf2 [Zea mays]
Length = 1007
Score = 144 bits (363), Expect = 1e-32
Identities = 66/110 (60%), Positives = 81/110 (73%)
Frame = +3
Query: 3 AGCELICMLDAYQGYHQVPLAREDQEKVSFVTADGTYCYNVMPFGLKNAGATYQRLMNKV 182
AGCE + LDAY GYHQ+ + DQ SF+T G YCY MPFGL+NAGATYQR MN V
Sbjct: 103 AGCETLSFLDAYSGYHQIRMKESDQLATSFITPFGMYCYVTMPFGLRNAGATYQRCMNHV 162
Query: 183 FREQIGRNLEVYVDDILIKSVRAADLFKDMEETFRTLRKYGVKLNPQKCL 332
F E IGR +E YVDDI++K+ +A+DL D+E TFR L+ GVKLNP+KC+
Sbjct: 163 FGEHIGRTVEAYVDDIVVKTRKASDLLSDLEVTFRCLKAKGVKLNPEKCV 212
>gb|AAK27822.1|AC022457_25 putative gag-pol precursor [Oryza sativa Japonica Group]
Length = 1720
Score = 142 bits (357), Expect = 6e-32
Identities = 63/110 (57%), Positives = 81/110 (73%)
Frame = +3
Query: 3 AGCELICMLDAYQGYHQVPLAREDQEKVSFVTADGTYCYNVMPFGLKNAGATYQRLMNKV 182
AGCEL+ LD Y GYHQ+ L D K SF+T G YCY MPFGLKNAGATYQR++ K
Sbjct: 941 AGCELLSFLDCYSGYHQIRLKESDCLKTSFITPFGAYCYITMPFGLKNAGATYQRMIQKC 1000
Query: 183 FREQIGRNLEVYVDDILIKSVRAADLFKDMEETFRTLRKYGVKLNPQKCL 332
F QIGRN+E YVDD+++K+ + DL D+EETF ++R + +KLNP+KC+
Sbjct: 1001 FSTQIGRNVEAYVDDVVVKTKQKDDLIADLEETFTSIRAFKMKLNPEKCI 1050
>gb|AAL75982.1|AF466203_11 putative prpol [Zea mays]
Length = 1854
Score = 142 bits (357), Expect = 6e-32
Identities = 65/110 (59%), Positives = 80/110 (72%)
Frame = +3
Query: 3 AGCELICMLDAYQGYHQVPLAREDQEKVSFVTADGTYCYNVMPFGLKNAGATYQRLMNKV 182
AGCE + LDAY GYHQ+ + DQ SF+T G YCY MPF L+NAGATYQR MN V
Sbjct: 968 AGCETLSFLDAYSGYHQIRMKESDQLATSFITPFGMYCYVTMPFSLRNAGATYQRCMNHV 1027
Query: 183 FREQIGRNLEVYVDDILIKSVRAADLFKDMEETFRTLRKYGVKLNPQKCL 332
F E IGR +E YVDDI++K+ +A+DL D+E TFR L+ GVKLNP+KC+
Sbjct: 1028 FGEHIGRTVEAYVDDIVVKTRKASDLLSDLEVTFRCLKAKGVKLNPEKCV 1077
>emb|CAE05173.2| OSJNBa0013A04.10 [Oryza sativa Japonica Group]
Length = 1230
Score = 142 bits (357), Expect = 6e-32
Identities = 62/110 (56%), Positives = 81/110 (73%)
Frame = +3
Query: 3 AGCELICMLDAYQGYHQVPLAREDQEKVSFVTADGTYCYNVMPFGLKNAGATYQRLMNKV 182
AGCEL+ LD Y GYHQ+ L D K SF+T G YCY MPFGLKNAGATYQR++ +
Sbjct: 739 AGCELLSFLDCYSGYHQIRLKESDCSKTSFITPFGAYCYITMPFGLKNAGATYQRMIQRC 798
Query: 183 FREQIGRNLEVYVDDILIKSVRAADLFKDMEETFRTLRKYGVKLNPQKCL 332
F QIGRN+E YVDD+++K+ + DL D+EETF ++R + +KLNP+KC+
Sbjct: 799 FSTQIGRNVEAYVDDVVVKTKQKDDLIADLEETFASIRAFRMKLNPEKCI 848
>gb|AAP54205.2| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1734
Score = 142 bits (357), Expect = 6e-32
Identities = 63/110 (57%), Positives = 81/110 (73%)
Frame = +3
Query: 3 AGCELICMLDAYQGYHQVPLAREDQEKVSFVTADGTYCYNVMPFGLKNAGATYQRLMNKV 182
AGCEL+ LD Y GYHQ+ L D K SF+T G YCY MPFGLKNAGATYQR++ K
Sbjct: 976 AGCELLSFLDCYSGYHQIRLKESDCLKTSFITPFGAYCYITMPFGLKNAGATYQRMIQKC 1035
Query: 183 FREQIGRNLEVYVDDILIKSVRAADLFKDMEETFRTLRKYGVKLNPQKCL 332
F QIGRN+E YVDD+++K+ + DL D+EETF ++R + +KLNP+KC+
Sbjct: 1036 FSTQIGRNVEAYVDDVVVKTKQKDDLIADLEETFTSIRAFKMKLNPEKCI 1085
>gb|ABF96344.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1841
Score = 142 bits (357), Expect = 6e-32
Identities = 62/110 (56%), Positives = 80/110 (72%)
Frame = +3
Query: 3 AGCELICMLDAYQGYHQVPLAREDQEKVSFVTADGTYCYNVMPFGLKNAGATYQRLMNKV 182
AGC+L+C LDAY GYHQ+ +ARED+EK +F+T GTYCY +MPFGLKNAG T+QR
Sbjct: 909 AGCDLLCFLDAYSGYHQIRMAREDEEKTAFITPIGTYCYTIMPFGLKNAGPTFQRTTRIS 968
Query: 183 FREQIGRNLEVYVDDILIKSVRAADLFKDMEETFRTLRKYGVKLNPQKCL 332
QIGRN+E YVDD+++K+ L D+ ETF +LR +KLNP KC+
Sbjct: 969 LDSQIGRNVEAYVDDLVVKTRNQETLLSDLAETFESLRSARIKLNPDKCV 1018
>gb|AAR06355.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1809
Score = 142 bits (357), Expect = 6e-32
Identities = 62/110 (56%), Positives = 80/110 (72%)
Frame = +3
Query: 3 AGCELICMLDAYQGYHQVPLAREDQEKVSFVTADGTYCYNVMPFGLKNAGATYQRLMNKV 182
AGC+L+C LDAY GYHQ+ +ARED+EK +F+T GTYCY +MPFGLKNAG T+QR
Sbjct: 909 AGCDLLCFLDAYSGYHQIRMAREDEEKTAFITPIGTYCYTIMPFGLKNAGPTFQRTTRIS 968
Query: 183 FREQIGRNLEVYVDDILIKSVRAADLFKDMEETFRTLRKYGVKLNPQKCL 332
QIGRN+E YVDD+++K+ L D+ ETF +LR +KLNP KC+
Sbjct: 969 LDSQIGRNVEAYVDDLVVKTRNQETLLSDLAETFESLRSARIKLNPDKCV 1018
>dbj|BAB40833.1| reverse transcriptase [Spinacia oleracea]
Length = 143
Score = 141 bits (356), Expect = 8e-32
Identities = 63/110 (57%), Positives = 84/110 (76%)
Frame = +3
Query: 3 AGCELICMLDAYQGYHQVPLAREDQEKVSFVTADGTYCYNVMPFGLKNAGATYQRLMNKV 182
AG L+ +DAY G+HQ+PL +DQEK SFVT G YCY VMPFGLKN+ AT+QRL+N V
Sbjct: 31 AGHALMSFMDAYSGFHQIPLWPDDQEKTSFVTEQGLYCYKVMPFGLKNSPATFQRLVNTV 90
Query: 183 FREQIGRNLEVYVDDILIKSVRAADLFKDMEETFRTLRKYGVKLNPQKCL 332
F Q+GRN+E Y+DD+++KS + + D+ ETF TLRKY ++LNP+KC+
Sbjct: 91 FSCQLGRNIEAYIDDLIVKSKQREEHLADLRETFETLRKYQMRLNPKKCV 140
>emb|CAD40020.2| OSJNBa0052O21.5 [Oryza sativa Japonica Group]
Length = 1888
Score = 141 bits (356), Expect = 8e-32
Identities = 62/110 (56%), Positives = 79/110 (71%)
Frame = +3
Query: 3 AGCELICMLDAYQGYHQVPLAREDQEKVSFVTADGTYCYNVMPFGLKNAGATYQRLMNKV 182
AGC+L+C LDAY GYHQ+ +ARED+EK +F+T GTYCY MPFGLKNAG T+QR
Sbjct: 834 AGCDLLCFLDAYSGYHQIRMAREDEEKTAFITPIGTYCYTTMPFGLKNAGPTFQRTTRIS 893
Query: 183 FREQIGRNLEVYVDDILIKSVRAADLFKDMEETFRTLRKYGVKLNPQKCL 332
Q+GRN+E YVDD+++K+ L D+ ETF TLR +KLNP KC+
Sbjct: 894 LGSQLGRNVEAYVDDLVVKTRNQETLLSDLAETFETLRSARIKLNPNKCV 943
>gb|ABA96681.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1512
Score = 141 bits (355), Expect = 1e-31
Identities = 62/110 (56%), Positives = 79/110 (71%)
Frame = +3
Query: 3 AGCELICMLDAYQGYHQVPLAREDQEKVSFVTADGTYCYNVMPFGLKNAGATYQRLMNKV 182
AGC+L+C LDAY GYHQ+ +ARED+EK +F+T GTYCY MPFGLKNAG T+QR
Sbjct: 582 AGCDLLCFLDAYSGYHQIRMAREDEEKTAFITPIGTYCYTTMPFGLKNAGPTFQRTTRIS 641
Query: 183 FREQIGRNLEVYVDDILIKSVRAADLFKDMEETFRTLRKYGVKLNPQKCL 332
QIGRN+E YVDD+++K+ L D+ ETF +LR +KLNP KC+
Sbjct: 642 LGSQIGRNVEAYVDDLIVKTRNQETLLSDLAETFESLRSARIKLNPDKCV 691
>gb|ABA94864.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1911
Score = 141 bits (355), Expect = 1e-31
Identities = 62/110 (56%), Positives = 79/110 (71%)
Frame = +3
Query: 3 AGCELICMLDAYQGYHQVPLAREDQEKVSFVTADGTYCYNVMPFGLKNAGATYQRLMNKV 182
AGC+L+C LDAY GYHQ+ +ARED+EK +F+T GTYCY MPFGLKNAG T+QR
Sbjct: 828 AGCDLLCFLDAYSGYHQIRMAREDEEKTAFITPIGTYCYTTMPFGLKNAGPTFQRTTRIS 887
Query: 183 FREQIGRNLEVYVDDILIKSVRAADLFKDMEETFRTLRKYGVKLNPQKCL 332
QIGRN+E YVDD+++K+ L D+ ETF +LR +KLNP KC+
Sbjct: 888 LGSQIGRNVEAYVDDLVVKTRNQESLLSDLAETFESLRSARIKLNPDKCV 937
>gb|AAL66751.1|AF464738_2 putative gag-pol precursor [Zea mays] gi|33113975|gb|AAP94597.1|
putative gag-pol precursor [Zea mays]
Length = 2003
Score = 141 bits (355), Expect = 1e-31
Identities = 65/110 (59%), Positives = 80/110 (72%)
Frame = +3
Query: 3 AGCELICMLDAYQGYHQVPLAREDQEKVSFVTADGTYCYNVMPFGLKNAGATYQRLMNKV 182
AGCE + LDAY GYHQ+ + DQ SF+T G YCY MPFGL+NAGA YQR MN V
Sbjct: 1094 AGCETLSFLDAYSGYHQIRMKESDQLVTSFITPFGMYCYVTMPFGLRNAGAMYQRCMNHV 1153
Query: 183 FREQIGRNLEVYVDDILIKSVRAADLFKDMEETFRTLRKYGVKLNPQKCL 332
F E IGR +E YVDDI++K+ +A+DL D+E TFR L+ GVKLNP+KC+
Sbjct: 1154 FGEHIGRMVEAYVDDIVVKTRKASDLLSDLEATFRCLKAKGVKLNPEKCV 1203
>emb|CAH66285.1| OSIGBa0161P06.2 [Oryza sativa Indica Group]
Length = 1987
Score = 141 bits (355), Expect = 1e-31
Identities = 62/109 (56%), Positives = 80/109 (73%)
Frame = +3
Query: 3 AGCELICMLDAYQGYHQVPLAREDQEKVSFVTADGTYCYNVMPFGLKNAGATYQRLMNKV 182
AGCEL+ LD Y GYHQ+ L D K SF+T G YCY MPFGLKNAGATYQR++ +
Sbjct: 1058 AGCELLSFLDCYSGYHQIRLKESDCLKTSFITPFGAYCYITMPFGLKNAGATYQRMIQRC 1117
Query: 183 FREQIGRNLEVYVDDILIKSVRAADLFKDMEETFRTLRKYGVKLNPQKC 329
F QIGRN+E YVDD+++K+ + DL D+EETF ++R + +KLNP+KC
Sbjct: 1118 FSTQIGRNVEAYVDDVVVKTKQKGDLISDLEETFASIRAFRMKLNPEKC 1166
>gb|ABF98055.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1890
Score = 141 bits (355), Expect = 1e-31
Identities = 62/110 (56%), Positives = 79/110 (71%)
Frame = +3
Query: 3 AGCELICMLDAYQGYHQVPLAREDQEKVSFVTADGTYCYNVMPFGLKNAGATYQRLMNKV 182
AGC+L+C LDAY GYHQ+ +ARED+EK +F+T GTYCY MPFGLKNAG T+QR
Sbjct: 847 AGCDLLCFLDAYSGYHQIRMAREDEEKTAFITPIGTYCYTTMPFGLKNAGPTFQRTTRIS 906
Query: 183 FREQIGRNLEVYVDDILIKSVRAADLFKDMEETFRTLRKYGVKLNPQKCL 332
QIGRN+E YVDD+++K+ L D+ ETF +LR +KLNP KC+
Sbjct: 907 LGSQIGRNVEAYVDDLVVKTRNQETLLSDLAETFESLRSARIKLNPDKCM 956