BLASTX nr result

ID: Zingiber23_contig00044545 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00044545
         (474 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABF70162.1| RNA-binding protein, putative [Musa acuminata]          68   1e-09
gb|ESW14501.1| hypothetical protein PHAVU_008G286500g [Phaseolus...    57   2e-06
ref|XP_006836782.1| hypothetical protein AMTR_s00088p00174110 [A...    57   2e-06
ref|XP_006595660.1| PREDICTED: heterogeneous nuclear ribonucleop...    57   3e-06

>gb|ABF70162.1| RNA-binding protein, putative [Musa acuminata]
          Length = 465

 Score = 68.2 bits (165), Expect = 1e-09
 Identities = 36/63 (57%), Positives = 40/63 (63%)
 Frame = +2

Query: 2   KLFDNTSVYGDPTWQLSLSELVSTAPFSYKLVKSEPDTADEGFADYMACYKMKNKQPNQG 181
           KL+  TSVYGDPTW  S SE  +T  FSYKL  S  D    GFADYMA Y + N   N+G
Sbjct: 406 KLYGATSVYGDPTWGSSSSEFDATGSFSYKLNNSNSDVTGNGFADYMAGYNVNN---NRG 462

Query: 182 IAT 190
           IAT
Sbjct: 463 IAT 465


>gb|ESW14501.1| hypothetical protein PHAVU_008G286500g [Phaseolus vulgaris]
          Length = 479

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/61 (42%), Positives = 38/61 (62%)
 Frame = +2

Query: 8   FDNTSVYGDPTWQLSLSELVSTAPFSYKLVKSEPDTADEGFADYMACYKMKNKQPNQGIA 187
           ++N+SVYGDPTW+ S SE   + PF Y L  +  D + +    Y+  Y +  +QPN+GIA
Sbjct: 419 YNNSSVYGDPTWRSSNSERDGSGPFGYGLGGAASDVSTKNSPGYVGGYTVNKRQPNRGIA 478

Query: 188 T 190
           T
Sbjct: 479 T 479


>ref|XP_006836782.1| hypothetical protein AMTR_s00088p00174110 [Amborella trichopoda]
           gi|548839342|gb|ERM99635.1| hypothetical protein
           AMTR_s00088p00174110 [Amborella trichopoda]
          Length = 472

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 26/61 (42%), Positives = 37/61 (60%)
 Frame = +2

Query: 5   LFDNTSVYGDPTWQLSLSELVSTAPFSYKLVKSEPDTADEGFADYMACYKMKNKQPNQGI 184
           L+  +SVYGDPTW+   +EL  ++ FSY L     D A +G   YM  Y + N+Q N+G+
Sbjct: 411 LYGGSSVYGDPTWRSGSTELDGSSSFSYGLGTMASDVATKGSGSYMGGYSVSNRQSNRGV 470

Query: 185 A 187
           A
Sbjct: 471 A 471


>ref|XP_006595660.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 1-like [Glycine
           max]
          Length = 479

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 26/61 (42%), Positives = 38/61 (62%)
 Frame = +2

Query: 8   FDNTSVYGDPTWQLSLSELVSTAPFSYKLVKSEPDTADEGFADYMACYKMKNKQPNQGIA 187
           ++N+SVYGDPTW+ S SE   + PF Y L  +  D + +    Y+  Y +  +QPN+GIA
Sbjct: 419 YNNSSVYGDPTWRSSNSERDGSGPFGYGLGGAASDVSAKSSPGYVGGYTVNKRQPNRGIA 478

Query: 188 T 190
           T
Sbjct: 479 T 479


Top