BLASTX nr result
ID: Zingiber23_contig00043955
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00043955
(606 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001130589.1| uncharacterized LOC100191688 [Zea mays] gi|1... 82 1e-13
gb|EXB38370.1| E3 ubiquitin-protein ligase ATL4 [Morus notabilis] 81 3e-13
tpg|DAA36278.1| TPA: putative RING zinc finger domain superfamil... 80 3e-13
dbj|BAJ87480.1| predicted protein [Hordeum vulgare subsp. vulgare] 80 3e-13
ref|NP_001151920.1| RING-H2 finger protein ATL3J [Zea mays] gi|1... 80 3e-13
ref|NP_001158906.1| uncharacterized protein LOC100303800 [Zea ma... 80 3e-13
ref|XP_004976624.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-... 80 4e-13
ref|XP_004953491.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-... 79 7e-13
dbj|BAJ96399.1| predicted protein [Hordeum vulgare subsp. vulgare] 79 7e-13
ref|XP_002454457.1| hypothetical protein SORBIDRAFT_04g031430 [S... 79 7e-13
dbj|BAD07666.1| putative RING finger 1 [Oryza sativa Japonica Gr... 79 1e-12
gb|EAY87120.1| hypothetical protein OsI_08522 [Oryza sativa Indi... 79 1e-12
ref|NP_001047780.1| Os02g0688800 [Oryza sativa Japonica Group] g... 79 1e-12
gb|EMJ21320.1| hypothetical protein PRUPE_ppa021294mg [Prunus pe... 79 1e-12
gb|AFW59092.1| putative RING zinc finger domain superfamily prot... 78 2e-12
ref|NP_001137007.1| uncharacterized protein LOC100217173 [Zea ma... 78 2e-12
ref|XP_004979696.1| PREDICTED: E3 ubiquitin-protein ligase Os04g... 77 4e-12
ref|XP_006295704.1| hypothetical protein CARUB_v10024822mg [Caps... 77 4e-12
ref|XP_006290364.1| hypothetical protein CARUB_v10017624mg [Caps... 77 4e-12
ref|NP_001068263.1| Os11g0610600 [Oryza sativa Japonica Group] g... 77 4e-12
>ref|NP_001130589.1| uncharacterized LOC100191688 [Zea mays] gi|194689566|gb|ACF78867.1|
unknown [Zea mays] gi|194707760|gb|ACF87964.1| unknown
[Zea mays] gi|413938299|gb|AFW72850.1| putative RING
zinc finger domain superfamily protein [Zea mays]
Length = 378
Score = 82.0 bits (201), Expect = 1e-13
Identities = 48/148 (32%), Positives = 69/148 (46%), Gaps = 18/148 (12%)
Frame = -1
Query: 414 DCAVCLRSFRPGEDLRLLPACFHSFHAGCVDTWIQNSPSCPLCRAPVTXXXXXXXXXXXX 235
DCAVCL F P DLRLLPAC H+FHA CVD W++ +PSCPLCRA V+
Sbjct: 143 DCAVCLSPFSPDADLRLLPACRHAFHAACVDAWLRTTPSCPLCRAAVSLPHPPLPTAPPL 202
Query: 234 PVKMTSSGVQARSFPEGESR-------NIXXXXXXXXXXXXXLYSIGNDP--MEEDIEEA 82
+ +R SR ++ YS+G+ ++E++E
Sbjct: 203 AAGSAQEALDSRVSSSSNSRSFRVEIGSVSNRRSSAAGDDRRTYSLGSFDYRVDEEVEAV 262
Query: 81 LVRIS---------SSRMSSPGDEVAAA 25
+ RI+ S ++PG+ +A A
Sbjct: 263 VSRITRPAVSAAAKSETQAAPGEALAEA 290
>gb|EXB38370.1| E3 ubiquitin-protein ligase ATL4 [Morus notabilis]
Length = 357
Score = 80.9 bits (198), Expect = 3e-13
Identities = 47/121 (38%), Positives = 61/121 (50%), Gaps = 12/121 (9%)
Frame = -1
Query: 600 RLRRSYSAVASDSFLDPNEPSGPAAADDSAR--------PSEKKLNSVLIDXXXXXXXXX 445
R R S ++S S P+ + AA DS R P+E NS LI+
Sbjct: 67 RCLRHLSPLSSSS--SPSSSTAAAAVGDSHRAISSRRVSPAENNHNSSLIEALPLFAFAS 124
Query: 444 XXXXXXXXXP----DCAVCLRSFRPGEDLRLLPACFHSFHAGCVDTWIQNSPSCPLCRAP 277
DCAVCL F P + LRLLP C H+FHA CVDTW+Q++ +CPLCR+P
Sbjct: 125 VTRRGAATSAIFAADCAVCLSKFEPDDQLRLLPLCCHAFHALCVDTWLQSNQTCPLCRSP 184
Query: 276 V 274
+
Sbjct: 185 I 185
>tpg|DAA36278.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 397
Score = 80.5 bits (197), Expect = 3e-13
Identities = 33/47 (70%), Positives = 37/47 (78%)
Frame = -1
Query: 414 DCAVCLRSFRPGEDLRLLPACFHSFHAGCVDTWIQNSPSCPLCRAPV 274
DCAVCL F P DLRLLPAC H+FHA CVD W++ +PSCPLCRA V
Sbjct: 146 DCAVCLSPFTPDADLRLLPACRHAFHAACVDAWLRTTPSCPLCRAAV 192
>dbj|BAJ87480.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 373
Score = 80.5 bits (197), Expect = 3e-13
Identities = 32/48 (66%), Positives = 39/48 (81%)
Frame = -1
Query: 414 DCAVCLRSFRPGEDLRLLPACFHSFHAGCVDTWIQNSPSCPLCRAPVT 271
DCAVCL F P +LRLLPAC H+FHA CVD W++N+PSCPLCRA ++
Sbjct: 150 DCAVCLSPFVPDAELRLLPACRHAFHAACVDAWLRNTPSCPLCRAAIS 197
>ref|NP_001151920.1| RING-H2 finger protein ATL3J [Zea mays] gi|195651079|gb|ACG45007.1|
RING-H2 finger protein ATL3J [Zea mays]
Length = 397
Score = 80.5 bits (197), Expect = 3e-13
Identities = 33/47 (70%), Positives = 37/47 (78%)
Frame = -1
Query: 414 DCAVCLRSFRPGEDLRLLPACFHSFHAGCVDTWIQNSPSCPLCRAPV 274
DCAVCL F P DLRLLPAC H+FHA CVD W++ +PSCPLCRA V
Sbjct: 144 DCAVCLSPFTPDADLRLLPACRHAFHAACVDAWLRTTPSCPLCRAAV 190
>ref|NP_001158906.1| uncharacterized protein LOC100303800 [Zea mays]
gi|194702970|gb|ACF85569.1| unknown [Zea mays]
Length = 265
Score = 80.5 bits (197), Expect = 3e-13
Identities = 33/47 (70%), Positives = 37/47 (78%)
Frame = -1
Query: 414 DCAVCLRSFRPGEDLRLLPACFHSFHAGCVDTWIQNSPSCPLCRAPV 274
DCAVCL F P DLRLLPAC H+FHA CVD W++ +PSCPLCRA V
Sbjct: 14 DCAVCLSPFTPDADLRLLPACRHAFHAACVDAWLRTTPSCPLCRAAV 60
>ref|XP_004976624.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Setaria italica]
Length = 380
Score = 80.1 bits (196), Expect = 4e-13
Identities = 46/108 (42%), Positives = 57/108 (52%), Gaps = 3/108 (2%)
Frame = -1
Query: 588 SYSAVASDSFLDPNEPSGPAAADDSAR---PSEKKLNSVLIDXXXXXXXXXXXXXXXXXX 418
S + A DS P P+ AA + P+++K LID
Sbjct: 83 STGSAAGDSA--PRPPAAAAAEGGGKKEEAPADEKQR--LIDSLPLFTMASALAALPKSS 138
Query: 417 PDCAVCLRSFRPGEDLRLLPACFHSFHAGCVDTWIQNSPSCPLCRAPV 274
PDCAVCL F P +LRLLPAC H+FHA CVD W++ +PSCPLCRA V
Sbjct: 139 PDCAVCLSPFTPDAELRLLPACRHAFHAACVDAWLRTTPSCPLCRAAV 186
>ref|XP_004953491.1| PREDICTED: E3 ubiquitin-protein ligase ATL4-like [Setaria italica]
Length = 402
Score = 79.3 bits (194), Expect = 7e-13
Identities = 32/48 (66%), Positives = 38/48 (79%)
Frame = -1
Query: 414 DCAVCLRSFRPGEDLRLLPACFHSFHAGCVDTWIQNSPSCPLCRAPVT 271
DCAVCL F P +LRLLPAC H+FHA CVD W++ +PSCPLCRA V+
Sbjct: 154 DCAVCLSPFSPDAELRLLPACRHAFHAACVDAWLRTTPSCPLCRAAVS 201
>dbj|BAJ96399.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 342
Score = 79.3 bits (194), Expect = 7e-13
Identities = 41/90 (45%), Positives = 48/90 (53%)
Frame = -1
Query: 543 PSGPAAADDSARPSEKKLNSVLIDXXXXXXXXXXXXXXXXXXPDCAVCLRSFRPGEDLRL 364
PS P DD + LID PDCAVCL FRP +LRL
Sbjct: 62 PSPPHGTDDGKKD--------LIDSLPRFTMASALAALPRSSPDCAVCLSPFRPEAELRL 113
Query: 363 LPACFHSFHAGCVDTWIQNSPSCPLCRAPV 274
LPAC H+FHA CVD W++ +P+CPLCRA V
Sbjct: 114 LPACRHAFHAVCVDAWLRTTPTCPLCRATV 143
>ref|XP_002454457.1| hypothetical protein SORBIDRAFT_04g031430 [Sorghum bicolor]
gi|241934288|gb|EES07433.1| hypothetical protein
SORBIDRAFT_04g031430 [Sorghum bicolor]
Length = 400
Score = 79.3 bits (194), Expect = 7e-13
Identities = 32/48 (66%), Positives = 38/48 (79%)
Frame = -1
Query: 414 DCAVCLRSFRPGEDLRLLPACFHSFHAGCVDTWIQNSPSCPLCRAPVT 271
DCAVCL F P +LRLLPAC H+FHA CVD W++ +PSCPLCRA V+
Sbjct: 150 DCAVCLSPFSPDAELRLLPACRHAFHAACVDAWLRTTPSCPLCRAAVS 197
>dbj|BAD07666.1| putative RING finger 1 [Oryza sativa Japonica Group]
Length = 502
Score = 79.0 bits (193), Expect = 1e-12
Identities = 32/48 (66%), Positives = 38/48 (79%)
Frame = -1
Query: 414 DCAVCLRSFRPGEDLRLLPACFHSFHAGCVDTWIQNSPSCPLCRAPVT 271
DCAVCL F P +LRLLPAC H+FHA CVD W++ +PSCPLCRA V+
Sbjct: 277 DCAVCLSPFAPEAELRLLPACRHAFHASCVDAWLRTTPSCPLCRATVS 324
>gb|EAY87120.1| hypothetical protein OsI_08522 [Oryza sativa Indica Group]
Length = 267
Score = 79.0 bits (193), Expect = 1e-12
Identities = 32/48 (66%), Positives = 38/48 (79%)
Frame = -1
Query: 414 DCAVCLRSFRPGEDLRLLPACFHSFHAGCVDTWIQNSPSCPLCRAPVT 271
DCAVCL F P +LRLLPAC H+FHA CVD W++ +PSCPLCRA V+
Sbjct: 42 DCAVCLSPFAPEAELRLLPACRHAFHASCVDAWLRTTPSCPLCRATVS 89
>ref|NP_001047780.1| Os02g0688800 [Oryza sativa Japonica Group]
gi|113537311|dbj|BAF09694.1| Os02g0688800 [Oryza sativa
Japonica Group] gi|125583300|gb|EAZ24231.1| hypothetical
protein OsJ_07979 [Oryza sativa Japonica Group]
Length = 373
Score = 79.0 bits (193), Expect = 1e-12
Identities = 32/48 (66%), Positives = 38/48 (79%)
Frame = -1
Query: 414 DCAVCLRSFRPGEDLRLLPACFHSFHAGCVDTWIQNSPSCPLCRAPVT 271
DCAVCL F P +LRLLPAC H+FHA CVD W++ +PSCPLCRA V+
Sbjct: 148 DCAVCLSPFAPEAELRLLPACRHAFHASCVDAWLRTTPSCPLCRATVS 195
>gb|EMJ21320.1| hypothetical protein PRUPE_ppa021294mg [Prunus persica]
Length = 329
Score = 78.6 bits (192), Expect = 1e-12
Identities = 29/47 (61%), Positives = 38/47 (80%)
Frame = -1
Query: 414 DCAVCLRSFRPGEDLRLLPACFHSFHAGCVDTWIQNSPSCPLCRAPV 274
DCAVCL F P ++LRLLP C H+FHA C+DTW+Q+ +CPLCR+P+
Sbjct: 112 DCAVCLSKFEPSDELRLLPLCCHAFHAMCIDTWLQSHQTCPLCRSPI 158
>gb|AFW59092.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 372
Score = 77.8 bits (190), Expect = 2e-12
Identities = 31/47 (65%), Positives = 37/47 (78%)
Frame = -1
Query: 414 DCAVCLRSFRPGEDLRLLPACFHSFHAGCVDTWIQNSPSCPLCRAPV 274
DCAVCL F P +LRLLPAC H+FHA CVD W++ +PSCPLCR+ V
Sbjct: 142 DCAVCLSPFAPDAELRLLPACRHAFHAACVDAWLRTAPSCPLCRSAV 188
>ref|NP_001137007.1| uncharacterized protein LOC100217173 [Zea mays]
gi|194697958|gb|ACF83063.1| unknown [Zea mays]
Length = 367
Score = 77.8 bits (190), Expect = 2e-12
Identities = 31/47 (65%), Positives = 37/47 (78%)
Frame = -1
Query: 414 DCAVCLRSFRPGEDLRLLPACFHSFHAGCVDTWIQNSPSCPLCRAPV 274
DCAVCL F P +LRLLPAC H+FHA CVD W++ +PSCPLCR+ V
Sbjct: 147 DCAVCLSPFAPDAELRLLPACRHAFHAACVDAWLRTAPSCPLCRSAV 193
>ref|XP_004979696.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Setaria
italica]
Length = 399
Score = 77.0 bits (188), Expect = 4e-12
Identities = 31/46 (67%), Positives = 36/46 (78%)
Frame = -1
Query: 411 CAVCLRSFRPGEDLRLLPACFHSFHAGCVDTWIQNSPSCPLCRAPV 274
CAVCL FR GE LRLLP C H+FH GC+DTW++ +CPLCRAPV
Sbjct: 214 CAVCLAEFRDGETLRLLPRCGHAFHRGCIDTWLRAHVNCPLCRAPV 259
>ref|XP_006295704.1| hypothetical protein CARUB_v10024822mg [Capsella rubella]
gi|482564412|gb|EOA28602.1| hypothetical protein
CARUB_v10024822mg [Capsella rubella]
Length = 260
Score = 77.0 bits (188), Expect = 4e-12
Identities = 30/47 (63%), Positives = 37/47 (78%)
Frame = -1
Query: 414 DCAVCLRSFRPGEDLRLLPACFHSFHAGCVDTWIQNSPSCPLCRAPV 274
+C+VCL F GE+ RLLP C HSFH GC+DTW ++S +CPLCRAPV
Sbjct: 114 ECSVCLSEFEEGEEGRLLPKCGHSFHVGCIDTWFRSSSTCPLCRAPV 160
>ref|XP_006290364.1| hypothetical protein CARUB_v10017624mg [Capsella rubella]
gi|482559071|gb|EOA23262.1| hypothetical protein
CARUB_v10017624mg [Capsella rubella]
Length = 329
Score = 77.0 bits (188), Expect = 4e-12
Identities = 61/213 (28%), Positives = 86/213 (40%), Gaps = 21/213 (9%)
Frame = -1
Query: 597 LRRSYSAVASDSFLDPNEPSGPAAADDSARPS------EKKLNSVLIDXXXXXXXXXXXX 436
L R + S L P+ S + DS R S E + +SVL
Sbjct: 47 LLRCLNRCTHSSLLPPSSSSAVPFSSDSRRFSGHRVAPETERSSVLDSLPIFKFSSVTRR 106
Query: 435 XXXXXXPDCAVCLRSFRPGEDLRLLPACFHSFHAGCVDTWIQNSPSCPLCRAP------- 277
DCAVCL F P + LRLLP C H+FHA C+D W+ ++ +CPLCR+P
Sbjct: 107 STSSNSGDCAVCLSKFEPEDQLRLLPLCCHAFHADCIDIWLVSNQTCPLCRSPLFASESD 166
Query: 276 ------VTXXXXXXXXXXXXPVKMTSSGVQARSFPEGESRNIXXXXXXXXXXXXXLYSIG 115
V ++ + R P ES + YSIG
Sbjct: 167 LMKSLVVAGGNNNNSSGGENSFRLEIGSISRRQIPIPESPD-----------QHRSYSIG 215
Query: 114 N-DPMEEDIEEALVRISSSRMSSPG-DEVAAAT 22
+ D + +D+E + + +R S+ G E AAAT
Sbjct: 216 SFDYIVDDVESEISESNFNRRSTSGKQEDAAAT 248
>ref|NP_001068263.1| Os11g0610600 [Oryza sativa Japonica Group]
gi|77551984|gb|ABA94781.1| Zinc finger, C3HC4 type
family protein, expressed [Oryza sativa Japonica Group]
gi|113645485|dbj|BAF28626.1| Os11g0610600 [Oryza sativa
Japonica Group]
Length = 405
Score = 77.0 bits (188), Expect = 4e-12
Identities = 31/46 (67%), Positives = 36/46 (78%)
Frame = -1
Query: 411 CAVCLRSFRPGEDLRLLPACFHSFHAGCVDTWIQNSPSCPLCRAPV 274
CAVCL FR GE LRLLP C H+FH GC+DTW++ +CPLCRAPV
Sbjct: 222 CAVCLTEFRDGETLRLLPRCRHAFHRGCIDTWLRAHVNCPLCRAPV 267