BLASTX nr result
ID: Zingiber23_contig00043919
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00043919
(484 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY12146.1| Tetratricopeptide repeat (TPR)-like superfamily p... 162 3e-38
gb|EMJ18778.1| hypothetical protein PRUPE_ppa019357mg, partial [... 153 2e-35
ref|XP_002264386.1| PREDICTED: putative pentatricopeptide repeat... 152 6e-35
emb|CAN64813.1| hypothetical protein VITISV_024998 [Vitis vinifera] 152 6e-35
ref|XP_006366029.1| PREDICTED: putative pentatricopeptide repeat... 147 1e-33
ref|XP_004248466.1| PREDICTED: putative pentatricopeptide repeat... 144 1e-32
ref|XP_002511392.1| pentatricopeptide repeat-containing protein,... 144 1e-32
ref|XP_004488459.1| PREDICTED: putative pentatricopeptide repeat... 140 1e-31
ref|XP_004306000.1| PREDICTED: putative pentatricopeptide repeat... 137 1e-30
gb|EEC76555.1| hypothetical protein OsI_14360 [Oryza sativa Indi... 135 4e-30
gb|AAO20068.1| hypothetical protein [Oryza sativa Japonica Group] 135 6e-30
gb|EEE60318.1| hypothetical protein OsJ_13399 [Oryza sativa Japo... 135 6e-30
gb|ABF99938.1| pentatricopeptide, putative, expressed [Oryza sat... 135 6e-30
ref|XP_006650908.1| PREDICTED: putative pentatricopeptide repeat... 133 2e-29
ref|XP_006418227.1| hypothetical protein EUTSA_v10007694mg [Eutr... 131 8e-29
ref|XP_006306057.1| hypothetical protein CARUB_v10011372mg [Caps... 130 2e-28
ref|NP_171850.1| pentatricopeptide repeat-containing protein [Ar... 130 2e-28
ref|XP_002892165.1| pentatricopeptide repeat-containing protein ... 129 5e-28
ref|XP_004981019.1| PREDICTED: putative pentatricopeptide repeat... 125 4e-27
ref|XP_003560906.1| PREDICTED: putative pentatricopeptide repeat... 125 4e-27
>gb|EOY12146.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
cacao]
Length = 428
Score = 162 bits (411), Expect = 3e-38
Identities = 85/152 (55%), Positives = 106/152 (69%)
Frame = +2
Query: 2 NNHRQLVTYTKLLASEGKQGRHHQALALFSEMFASPHIHLDPYVLPLVLKSAAALRLPLF 181
+NH +L++ TK L S QGRH AL+LF M ASP + LDPYV PLVLKS AA+ P
Sbjct: 6 SNHLRLLSLTKQLTSHVNQGRHADALSLFHSMQASPSLTLDPYVFPLVLKSCAAISRPRL 65
Query: 182 MRAIHACAAKSGLLHSPHVASSLVDCFGKCISLADARKLFDDCSQRNVIVWNTMISLYCR 361
+IHA A KS LL +P VA +LVD +GKC S++ AR+LFD+ QRNV+VWN++ISLY R
Sbjct: 66 GSSIHAHATKSSLLSNPFVACALVDMYGKCFSISSARRLFDEIPQRNVVVWNSLISLYTR 125
Query: 362 SNNLVGALQLFGLMDVQPTESSYNCIIAALSE 457
+ AL LF MDV P ES++N IIA LSE
Sbjct: 126 CGRVDEALHLFQSMDVGPNESTFNPIIAGLSE 157
>gb|EMJ18778.1| hypothetical protein PRUPE_ppa019357mg, partial [Prunus persica]
Length = 433
Score = 153 bits (387), Expect = 2e-35
Identities = 82/157 (52%), Positives = 109/157 (69%)
Frame = +2
Query: 2 NNHRQLVTYTKLLASEGKQGRHHQALALFSEMFASPHIHLDPYVLPLVLKSAAALRLPLF 181
+N ++L++ TKLL S+ QGRH +ALALF M AS + LD +V LVLKS +A+ P
Sbjct: 10 SNFQRLLSLTKLLTSDVNQGRHDKALALFHHMQASLALPLDAHVFSLVLKSCSAIHRPQL 69
Query: 182 MRAIHACAAKSGLLHSPHVASSLVDCFGKCISLADARKLFDDCSQRNVIVWNTMISLYCR 361
+IHA AKS +L +P VAS+LVD +GKC+SL+ AR LFD+ QRNV+VWN MIS+Y R
Sbjct: 70 GISIHAHVAKSSILPNPFVASALVDMYGKCVSLSAARNLFDEIPQRNVVVWNAMISVYTR 129
Query: 362 SNNLVGALQLFGLMDVQPTESSYNCIIAALSESGGAS 472
+ N+ AL LF MDV+P S++N IIA L+ S S
Sbjct: 130 NGNVSDALGLFEAMDVEPDVSTFNSIIAGLAGSDDGS 166
Score = 57.8 bits (138), Expect = 1e-06
Identities = 33/118 (27%), Positives = 61/118 (51%), Gaps = 3/118 (2%)
Frame = +2
Query: 122 DPYVLPLVLKSAAALRLPLFMRAIHACAAKSGLLHSPHVASSLVDCFGKCISLADARKLF 301
D L +L++ + F+R IH ++ + V+S LV+ +G+C LA+A LF
Sbjct: 184 DLITLLALLRACVGVAALRFIREIHGYDVRNEIDFHSQVSSLLVEAYGRCGCLANAHNLF 243
Query: 302 DDCSQRNVIVWNTMISLYCRSNNLVGALQLFGLMD---VQPTESSYNCIIAALSESGG 466
+++V+ W+++IS Y AL +F M+ V+P E ++ ++ A S + G
Sbjct: 244 HCMKKKDVVAWSSLISAYALHGEARAALDVFRKMELAKVEPDEITFLAVLKACSHAEG 301
>ref|XP_002264386.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g03510 [Vitis vinifera] gi|298205226|emb|CBI17285.3|
unnamed protein product [Vitis vinifera]
Length = 430
Score = 152 bits (383), Expect = 6e-35
Identities = 77/151 (50%), Positives = 101/151 (66%)
Frame = +2
Query: 2 NNHRQLVTYTKLLASEGKQGRHHQALALFSEMFASPHIHLDPYVLPLVLKSAAALRLPLF 181
+N+ +L++YTKLLAS QGRHH AL+LF M AS LD +V PL LKS AA P
Sbjct: 6 SNYLRLLSYTKLLASHVNQGRHHDALSLFHHMHASSAPALDAFVFPLALKSCAAAHRPNL 65
Query: 182 MRAIHACAAKSGLLHSPHVASSLVDCFGKCISLADARKLFDDCSQRNVIVWNTMISLYCR 361
AIHA K L+ +P VA +LVD +GKC+S++ AR LFD+ RN++VWN MIS+Y
Sbjct: 66 GAAIHAHVTKFSLVSNPFVACALVDMYGKCVSVSSARHLFDEIPHRNIVVWNAMISIYTH 125
Query: 362 SNNLVGALQLFGLMDVQPTESSYNCIIAALS 454
S + AL LF +MDV+P S++N II+ LS
Sbjct: 126 SGRVADALGLFEVMDVEPNASTFNAIISGLS 156
>emb|CAN64813.1| hypothetical protein VITISV_024998 [Vitis vinifera]
Length = 513
Score = 152 bits (383), Expect = 6e-35
Identities = 77/151 (50%), Positives = 101/151 (66%)
Frame = +2
Query: 2 NNHRQLVTYTKLLASEGKQGRHHQALALFSEMFASPHIHLDPYVLPLVLKSAAALRLPLF 181
+N+ +L++YTKLLAS QGRHH AL+LF M AS LD +V PL LKS AA P
Sbjct: 6 SNYLRLLSYTKLLASHVNQGRHHDALSLFHHMHASSAPALDAFVFPLALKSCAAAHRPNL 65
Query: 182 MRAIHACAAKSGLLHSPHVASSLVDCFGKCISLADARKLFDDCSQRNVIVWNTMISLYCR 361
AIHA K L+ +P VA +LVD +GKC+S++ AR LFD+ RN++VWN MIS+Y
Sbjct: 66 GAAIHAHVTKFSLVSNPFVACALVDMYGKCVSVSSARHLFDEIPHRNIVVWNAMISIYTH 125
Query: 362 SNNLVGALQLFGLMDVQPTESSYNCIIAALS 454
S + AL LF +MDV+P S++N II+ LS
Sbjct: 126 SGRVADALGLFEVMDVEPNASTFNAIISGLS 156
>ref|XP_006366029.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g03510-like [Solanum tuberosum]
Length = 458
Score = 147 bits (371), Expect = 1e-33
Identities = 71/153 (46%), Positives = 106/153 (69%)
Frame = +2
Query: 2 NNHRQLVTYTKLLASEGKQGRHHQALALFSEMFASPHIHLDPYVLPLVLKSAAALRLPLF 181
+N ++L++YTKLL S QG+H QAL+LF ++ ++ LDP+V PL LKS AAL
Sbjct: 36 SNFQRLLSYTKLLTSHVNQGKHEQALSLFHQIHSTLSHSLDPFVFPLALKSCAALSFSQL 95
Query: 182 MRAIHACAAKSGLLHSPHVASSLVDCFGKCISLADARKLFDDCSQRNVIVWNTMISLYCR 361
IHA K+ + +P VA +LVD +GKC+S+ AR+LFD+ +RNV+VWN+MIS+Y
Sbjct: 96 GATIHAHTTKASFISNPFVACALVDMYGKCVSVEYARQLFDESPERNVVVWNSMISVYAH 155
Query: 362 SNNLVGALQLFGLMDVQPTESSYNCIIAALSES 460
N++ AL+LF +MDV+P S++N II L+++
Sbjct: 156 CNDVGRALELFRVMDVEPNSSTFNAIITGLADT 188
>ref|XP_004248466.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g03510-like [Solanum lycopersicum]
Length = 483
Score = 144 bits (363), Expect = 1e-32
Identities = 72/153 (47%), Positives = 104/153 (67%)
Frame = +2
Query: 2 NNHRQLVTYTKLLASEGKQGRHHQALALFSEMFASPHIHLDPYVLPLVLKSAAALRLPLF 181
+N + L++YTKLL S QG+H QAL+LF ++ ++ LDP+V PL LKS AAL
Sbjct: 61 SNFKLLLSYTKLLTSHVNQGKHEQALSLFHQIHSTLSRSLDPFVFPLALKSCAALSFSQL 120
Query: 182 MRAIHACAAKSGLLHSPHVASSLVDCFGKCISLADARKLFDDCSQRNVIVWNTMISLYCR 361
IHA K+ +P VA +LVD +GKC+S+ AR+LFD+ +RNV+VWN+MIS+Y
Sbjct: 121 GATIHAHTIKASFGSNPFVACALVDMYGKCVSVEYARQLFDESPERNVVVWNSMISVYAH 180
Query: 362 SNNLVGALQLFGLMDVQPTESSYNCIIAALSES 460
+ + AL+LF +MDV+P S++N IIA L+E+
Sbjct: 181 CDEVGRALELFRVMDVEPNSSTFNAIIAGLAET 213
>ref|XP_002511392.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223550507|gb|EEF51994.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 441
Score = 144 bits (363), Expect = 1e-32
Identities = 72/151 (47%), Positives = 98/151 (64%)
Frame = +2
Query: 2 NNHRQLVTYTKLLASEGKQGRHHQALALFSEMFASPHIHLDPYVLPLVLKSAAALRLPLF 181
+ + +L+++TK L S +G HH AL LF M S + LDPYV PLVLKS +A+ P
Sbjct: 22 STYLRLLSFTKQLTSHVNRGLHHDALTLFYHMQTSLALSLDPYVFPLVLKSCSAVLCPQL 81
Query: 182 MRAIHACAAKSGLLHSPHVASSLVDCFGKCISLADARKLFDDCSQRNVIVWNTMISLYCR 361
++HA K G L +P VAS+LVD +GKC + ARKLFD+ QRNV+VWN MISLY
Sbjct: 82 GTSVHAHIVKMGFLSNPFVASALVDMYGKCACIFSARKLFDEIPQRNVVVWNAMISLYTH 141
Query: 362 SNNLVGALQLFGLMDVQPTESSYNCIIAALS 454
SN + AL +F M+++P S++N +I LS
Sbjct: 142 SNRVRDALDMFDAMEIEPNVSTFNALIYGLS 172
Score = 59.3 bits (142), Expect = 5e-07
Identities = 32/105 (30%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Frame = +2
Query: 158 AALRLPLFMRAIHACAAKSGLLHSPHVASSLVDCFGKCISLADARKLFDDCSQRNVIVWN 337
AAL L +R IH + ++ + P + S L+D +G+C L +A +F +R+V+ W+
Sbjct: 211 AALNL---IREIHGYSIRNDIDRHPQLGSGLLDAYGRCGCLINASNVFCGMKERDVVAWS 267
Query: 338 TMISLYCRSNNLVGALQLFGLMD---VQPTESSYNCIIAALSESG 463
++IS Y AL++F M+ VQP + ++ ++ A S +G
Sbjct: 268 SLISAYALHGEAKNALEIFRQMELAKVQPDDITFLAVLKACSHAG 312
>ref|XP_004488459.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g03510-like [Cicer arietinum]
Length = 438
Score = 140 bits (354), Expect = 1e-31
Identities = 73/154 (47%), Positives = 102/154 (66%), Gaps = 1/154 (0%)
Frame = +2
Query: 2 NNHRQLVTYTKLLASEGKQGRHHQALALFSEMFASPHIHLDPYVLPLVLKSAAALRLPLF 181
+NH QL++ TKL+ + RH QAL +F M ++ I LDP+V L LKS AL LP
Sbjct: 10 SNHHQLLSLTKLITTHVNNSRHKQALTIFHHMHSTLLITLDPHVFTLALKSCTALNLPFL 69
Query: 182 MRAIHACAAKSGLLHS-PHVASSLVDCFGKCISLADARKLFDDCSQRNVIVWNTMISLYC 358
+IH+ KS L + P ++SSL++ +G CISL ARKLFD+ NV++WN++ISLY
Sbjct: 70 ATSIHSHLIKSSFLSTNPFLSSSLINLYGHCISLTSARKLFDETPHPNVVIWNSIISLYS 129
Query: 359 RSNNLVGALQLFGLMDVQPTESSYNCIIAALSES 460
S+++ AL+LF +M V P ES++N IIAALS S
Sbjct: 130 HSHHVTTALKLFNVMHVPPNESTFNPIIAALSTS 163
>ref|XP_004306000.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g03510-like [Fragaria vesca subsp. vesca]
Length = 429
Score = 137 bits (346), Expect = 1e-30
Identities = 69/151 (45%), Positives = 102/151 (67%)
Frame = +2
Query: 2 NNHRQLVTYTKLLASEGKQGRHHQALALFSEMFASPHIHLDPYVLPLVLKSAAALRLPLF 181
++ ++L+++TK L S QG H +AL LF + AS + LD +V L+LKS ++LR P
Sbjct: 8 SHFQRLLSFTKQLTSHVNQGSHDKALTLFHHIQASLALPLDAHVFSLILKSCSSLRRPQL 67
Query: 182 MRAIHACAAKSGLLHSPHVASSLVDCFGKCISLADARKLFDDCSQRNVIVWNTMISLYCR 361
A+HA KS L +P+VAS+LVD +GKC+S+ AR LFD+ RNV+VWN MIS+Y R
Sbjct: 68 GAAVHAHVTKSSFLPNPYVASALVDMYGKCVSVWTARHLFDEIPHRNVVVWNAMISVYTR 127
Query: 362 SNNLVGALQLFGLMDVQPTESSYNCIIAALS 454
+ ++ AL+LF MD++P +YN I+A +S
Sbjct: 128 NADVAEALRLFEAMDIEPDVGTYNTIMAGMS 158
>gb|EEC76555.1| hypothetical protein OsI_14360 [Oryza sativa Indica Group]
Length = 436
Score = 135 bits (341), Expect = 4e-30
Identities = 80/162 (49%), Positives = 102/162 (62%), Gaps = 8/162 (4%)
Frame = +2
Query: 2 NNHRQLVTYTKLLASEGKQGRHHQALALFSEMFASPHIH--LDP---YVLPLVLKSAAAL 166
+ H++L + TKLL S GRH ALA FS M + P + DP Y PL LKS++AL
Sbjct: 3 SRHQRLASLTKLLTSHVNAGRHRDALAFFSRMVSDPSLPPLSDPSFAYAFPLALKSSSAL 62
Query: 167 RLPLFMRA---IHACAAKSGLLHSPHVASSLVDCFGKCISLADARKLFDDCSQRNVIVWN 337
RLP A +HA AAK G L SP AS+LV +G C S A AR+LFD+ RN IV +
Sbjct: 63 RLPSAAAAADSLHALAAKCGFLSSPFFASALVASYGACASPALARRLFDELPHRNAIVCS 122
Query: 338 TMISLYCRSNNLVGALQLFGLMDVQPTESSYNCIIAALSESG 463
MIS++ RS +L GAL+ LMDV PT S +N +IAA++ESG
Sbjct: 123 AMISVHIRSGDLAGALRELDLMDVAPTASCFNSVIAAVAESG 164
Score = 67.8 bits (164), Expect = 1e-09
Identities = 43/154 (27%), Positives = 83/154 (53%), Gaps = 6/154 (3%)
Frame = +2
Query: 26 YTKLLASEGKQGRHH-QALALFSEMFASPHIHLDPYVLPLV--LKSAAALRLPLFMRAIH 196
+ ++A+ + G H +A+ L+ M + + P ++ L+ + S AL ++ +H
Sbjct: 153 FNSVIAAVAESGEHPARAIDLYRRM---QRMGVLPSLITLLALVPSCTALGALSSIKEVH 209
Query: 197 ACAAKSGLLHSPHVASSLVDCFGKCISLADARKLFDDCSQRNVIVWNTMISLYCRSNNLV 376
A + G+ S H+ SSL++ +G+C SLA AR +FD +R+V+VW++++S Y +
Sbjct: 210 GFATRHGMFASCHLGSSLIEAYGRCGSLAGARNVFDQVQERDVVVWSSIVSAYAFHGHAD 269
Query: 377 GALQLFGLMD---VQPTESSYNCIIAALSESGGA 469
A+ LF M+ V+P + ++ A +G A
Sbjct: 270 VAMSLFRHMELDNVRPDGIMFLGVLKACGHAGHA 303
>gb|AAO20068.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 409
Score = 135 bits (340), Expect = 6e-30
Identities = 80/162 (49%), Positives = 102/162 (62%), Gaps = 8/162 (4%)
Frame = +2
Query: 2 NNHRQLVTYTKLLASEGKQGRHHQALALFSEMFASPHIH--LDP---YVLPLVLKSAAAL 166
+ H++L + TKLL S GRH ALA FS M + P + DP Y PL LKS++AL
Sbjct: 3 SRHQRLASLTKLLTSHVNVGRHRDALAFFSRMVSDPSLPPLSDPSFAYAFPLALKSSSAL 62
Query: 167 RLPLFMRA---IHACAAKSGLLHSPHVASSLVDCFGKCISLADARKLFDDCSQRNVIVWN 337
RLP A +HA AAK G L SP AS+LV +G C S A AR+LFD+ RN IV +
Sbjct: 63 RLPSAAAAADSLHALAAKCGFLSSPFFASALVASYGACASPALARRLFDELPHRNAIVCS 122
Query: 338 TMISLYCRSNNLVGALQLFGLMDVQPTESSYNCIIAALSESG 463
MIS++ RS +L GAL+ LMDV PT S +N +IAA++ESG
Sbjct: 123 AMISVHIRSGDLAGALRELDLMDVAPTASCFNSVIAAVAESG 164
Score = 67.8 bits (164), Expect = 1e-09
Identities = 43/154 (27%), Positives = 83/154 (53%), Gaps = 6/154 (3%)
Frame = +2
Query: 26 YTKLLASEGKQGRHH-QALALFSEMFASPHIHLDPYVLPLV--LKSAAALRLPLFMRAIH 196
+ ++A+ + G H +A+ L+ M + + P ++ L+ + S AL ++ +H
Sbjct: 153 FNSVIAAVAESGEHPARAIDLYRRM---QRMGVLPSLITLLALVPSCTALGALSSIKEVH 209
Query: 197 ACAAKSGLLHSPHVASSLVDCFGKCISLADARKLFDDCSQRNVIVWNTMISLYCRSNNLV 376
A + G+ S H+ SSL++ +G+C SLA AR +FD +R+V+VW++++S Y +
Sbjct: 210 GFATRHGMFASCHLGSSLIEAYGRCGSLAGARNVFDQVQERDVVVWSSIVSAYAFHGHAD 269
Query: 377 GALQLFGLMD---VQPTESSYNCIIAALSESGGA 469
A+ LF M+ V+P + ++ A +G A
Sbjct: 270 VAMSLFRHMELDNVRPDGIMFLGVLKACGHAGHA 303
>gb|EEE60318.1| hypothetical protein OsJ_13399 [Oryza sativa Japonica Group]
Length = 436
Score = 135 bits (340), Expect = 6e-30
Identities = 80/162 (49%), Positives = 102/162 (62%), Gaps = 8/162 (4%)
Frame = +2
Query: 2 NNHRQLVTYTKLLASEGKQGRHHQALALFSEMFASPHIH--LDP---YVLPLVLKSAAAL 166
+ H++L + TKLL S GRH ALA FS M + P + DP Y PL LKS++AL
Sbjct: 3 SRHQRLASLTKLLTSHVNVGRHRDALAFFSRMVSDPSLPPLSDPSFAYAFPLALKSSSAL 62
Query: 167 RLPLFMRA---IHACAAKSGLLHSPHVASSLVDCFGKCISLADARKLFDDCSQRNVIVWN 337
RLP A +HA AAK G L SP AS+LV +G C S A AR+LFD+ RN IV +
Sbjct: 63 RLPSAAAAADSLHALAAKCGFLSSPFFASALVASYGACASPALARRLFDELPHRNAIVCS 122
Query: 338 TMISLYCRSNNLVGALQLFGLMDVQPTESSYNCIIAALSESG 463
MIS++ RS +L GAL+ LMDV PT S +N +IAA++ESG
Sbjct: 123 AMISVHIRSGDLAGALRELDLMDVAPTASCFNSVIAAVAESG 164
Score = 67.8 bits (164), Expect = 1e-09
Identities = 43/154 (27%), Positives = 83/154 (53%), Gaps = 6/154 (3%)
Frame = +2
Query: 26 YTKLLASEGKQGRHH-QALALFSEMFASPHIHLDPYVLPLV--LKSAAALRLPLFMRAIH 196
+ ++A+ + G H +A+ L+ M + + P ++ L+ + S AL ++ +H
Sbjct: 153 FNSVIAAVAESGEHPARAIDLYRRM---QRMGVLPSLITLLALVPSCTALGALSSIKEVH 209
Query: 197 ACAAKSGLLHSPHVASSLVDCFGKCISLADARKLFDDCSQRNVIVWNTMISLYCRSNNLV 376
A + G+ S H+ SSL++ +G+C SLA AR +FD +R+V+VW++++S Y +
Sbjct: 210 GFATRHGMFASCHLGSSLIEAYGRCGSLAGARNVFDQVQERDVVVWSSIVSAYAFHGHAD 269
Query: 377 GALQLFGLMD---VQPTESSYNCIIAALSESGGA 469
A+ LF M+ V+P + ++ A +G A
Sbjct: 270 VAMSLFRHMELDNVRPDGIMFLGVLKACGHAGHA 303
>gb|ABF99938.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group] gi|215704803|dbj|BAG94831.1| unnamed protein
product [Oryza sativa Japonica Group]
Length = 438
Score = 135 bits (340), Expect = 6e-30
Identities = 80/162 (49%), Positives = 102/162 (62%), Gaps = 8/162 (4%)
Frame = +2
Query: 2 NNHRQLVTYTKLLASEGKQGRHHQALALFSEMFASPHIH--LDP---YVLPLVLKSAAAL 166
+ H++L + TKLL S GRH ALA FS M + P + DP Y PL LKS++AL
Sbjct: 3 SRHQRLASLTKLLTSHVNVGRHRDALAFFSRMVSDPSLPPLSDPSFAYAFPLALKSSSAL 62
Query: 167 RLPLFMRA---IHACAAKSGLLHSPHVASSLVDCFGKCISLADARKLFDDCSQRNVIVWN 337
RLP A +HA AAK G L SP AS+LV +G C S A AR+LFD+ RN IV +
Sbjct: 63 RLPSAAAAADSLHALAAKCGFLSSPFFASALVASYGACASPALARRLFDELPHRNAIVCS 122
Query: 338 TMISLYCRSNNLVGALQLFGLMDVQPTESSYNCIIAALSESG 463
MIS++ RS +L GAL+ LMDV PT S +N +IAA++ESG
Sbjct: 123 AMISVHIRSGDLAGALRELDLMDVAPTASCFNSVIAAVAESG 164
Score = 67.8 bits (164), Expect = 1e-09
Identities = 43/154 (27%), Positives = 83/154 (53%), Gaps = 6/154 (3%)
Frame = +2
Query: 26 YTKLLASEGKQGRHH-QALALFSEMFASPHIHLDPYVLPLV--LKSAAALRLPLFMRAIH 196
+ ++A+ + G H +A+ L+ M + + P ++ L+ + S AL ++ +H
Sbjct: 153 FNSVIAAVAESGEHPARAIDLYRRM---QRMGVLPSLITLLALVPSCTALGALSSIKEVH 209
Query: 197 ACAAKSGLLHSPHVASSLVDCFGKCISLADARKLFDDCSQRNVIVWNTMISLYCRSNNLV 376
A + G+ S H+ SSL++ +G+C SLA AR +FD +R+V+VW++++S Y +
Sbjct: 210 GFATRHGMFASCHLGSSLIEAYGRCGSLAGARNVFDQVQERDVVVWSSIVSAYAFHGHAD 269
Query: 377 GALQLFGLMD---VQPTESSYNCIIAALSESGGA 469
A+ LF M+ V+P + ++ A +G A
Sbjct: 270 VAMSLFRHMELDNVRPDGIMFLGVLKACGHAGHA 303
>ref|XP_006650908.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g03510-like [Oryza brachyantha]
Length = 436
Score = 133 bits (335), Expect = 2e-29
Identities = 74/158 (46%), Positives = 102/158 (64%), Gaps = 6/158 (3%)
Frame = +2
Query: 8 HRQLVTYTKLLASEGKQGRHHQALALFSEMFASPHIHLDP-----YVLPLVLKSAAALRL 172
H++L + TK+L S RH A+A F+ M A P + P + PLVLKS++ALRL
Sbjct: 5 HQRLASLTKVLTSHVNAARHRDAVAFFTRMLADPDLPPLPDPSFAFAFPLVLKSSSALRL 64
Query: 173 P-LFMRAIHACAAKSGLLHSPHVASSLVDCFGKCISLADARKLFDDCSQRNVIVWNTMIS 349
P + +IHA AAK G L SP VAS+LV +G C S A AR+LFD+ +RN +VW+ MIS
Sbjct: 65 PPAAVDSIHALAAKCGFLSSPFVASALVASYGACASPALARRLFDELPRRNAVVWSAMIS 124
Query: 350 LYCRSNNLVGALQLFGLMDVQPTESSYNCIIAALSESG 463
++ RS ++ AL+ LMDV PT S +N +IAA++ SG
Sbjct: 125 VHIRSGDVASALRELDLMDVAPTSSCFNSVIAAVAVSG 162
Score = 68.6 bits (166), Expect = 8e-10
Identities = 44/154 (28%), Positives = 84/154 (54%), Gaps = 6/154 (3%)
Frame = +2
Query: 26 YTKLLASEGKQGRHH-QALALFSEMFASPHIHLDPYVLPLV--LKSAAALRLPLFMRAIH 196
+ ++A+ G H +A+ L+ M + + P ++ L+ + S AAL ++ +H
Sbjct: 151 FNSVIAAVAVSGEHPARAIELYRRM---RRMAVRPCLITLLALVPSCAALGALSSIKEVH 207
Query: 197 ACAAKSGLLHSPHVASSLVDCFGKCISLADARKLFDDCSQRNVIVWNTMISLYCRSNNLV 376
A + G+ S H+ SSL++ +G+C SLA AR++FD +R+V+VW++++S Y +
Sbjct: 208 GFAMRHGMFASCHLGSSLIEAYGRCGSLAAAREVFDQMQERDVVVWSSIVSAYAFHGHAD 267
Query: 377 GALQLFGLMD---VQPTESSYNCIIAALSESGGA 469
A+ LF M+ V+P + ++ A +G A
Sbjct: 268 VAMSLFRHMELDNVRPDGIMFLGVLKACGHAGHA 301
>ref|XP_006418227.1| hypothetical protein EUTSA_v10007694mg [Eutrema salsugineum]
gi|557095998|gb|ESQ36580.1| hypothetical protein
EUTSA_v10007694mg [Eutrema salsugineum]
Length = 429
Score = 131 bits (330), Expect = 8e-29
Identities = 67/150 (44%), Positives = 94/150 (62%)
Frame = +2
Query: 2 NNHRQLVTYTKLLASEGKQGRHHQALALFSEMFASPHIHLDPYVLPLVLKSAAALRLPLF 181
+N +L++ TK L+S QG H QAL+LF +M +S + LD +V L LKS AA P+
Sbjct: 7 SNCTRLISLTKQLSSYANQGNHEQALSLFRQMHSSFSLPLDAHVFSLALKSCAAAFRPVL 66
Query: 182 MRAIHACAAKSGLLHSPHVASSLVDCFGKCISLADARKLFDDCSQRNVIVWNTMISLYCR 361
++HA KS L +P V +L+D +GKC+S++ ARKLFD+ RN +VWN MIS Y
Sbjct: 67 GASVHAHTLKSNFLSNPFVGCALLDMYGKCVSVSHARKLFDEIPHRNAVVWNAMISNYTH 126
Query: 362 SNNLVGALQLFGLMDVQPTESSYNCIIAAL 451
+ A++L+ MDV P ESS+N II L
Sbjct: 127 CGKIREAVELYEAMDVMPNESSFNAIIKGL 156
>ref|XP_006306057.1| hypothetical protein CARUB_v10011372mg [Capsella rubella]
gi|482574768|gb|EOA38955.1| hypothetical protein
CARUB_v10011372mg [Capsella rubella]
Length = 429
Score = 130 bits (327), Expect = 2e-28
Identities = 68/150 (45%), Positives = 95/150 (63%)
Frame = +2
Query: 2 NNHRQLVTYTKLLASEGKQGRHHQALALFSEMFASPHIHLDPYVLPLVLKSAAALRLPLF 181
+N +L++ TK L+S QG H QAL LF +M +S + LD +V L LKS AA P+
Sbjct: 7 SNCTKLISLTKQLSSYANQGHHVQALNLFRQMHSSFALPLDAHVFSLALKSCAAAFRPVL 66
Query: 182 MRAIHACAAKSGLLHSPHVASSLVDCFGKCISLADARKLFDDCSQRNVIVWNTMISLYCR 361
++HA + KS L +P V +L+D +GKC+S++ ARKLFD+ QRN +VWN MIS Y
Sbjct: 67 GESVHAHSLKSNFLANPFVGCALLDMYGKCVSVSHARKLFDEIPQRNAVVWNAMISHYTH 126
Query: 362 SNNLVGALQLFGLMDVQPTESSYNCIIAAL 451
+ A++L+ MDV P ESS+N II L
Sbjct: 127 CGKIREAVELYEAMDVLPNESSFNAIIKGL 156
>ref|NP_171850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180302|sp|Q9LR72.1|PPR7_ARATH RecName:
Full=Putative pentatricopeptide repeat-containing
protein At1g03510 gi|9280666|gb|AAF86535.1|AC002560_28
F21B7.13 [Arabidopsis thaliana]
gi|332189459|gb|AEE27580.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 429
Score = 130 bits (327), Expect = 2e-28
Identities = 67/146 (45%), Positives = 93/146 (63%)
Frame = +2
Query: 14 QLVTYTKLLASEGKQGRHHQALALFSEMFASPHIHLDPYVLPLVLKSAAALRLPLFMRAI 193
+L++ TK L+S QG H QAL LF +M +S + LD +V L LKS AA P+ ++
Sbjct: 11 KLISLTKQLSSYANQGNHEQALNLFLQMHSSFALPLDAHVFSLALKSCAAAFRPVLGGSV 70
Query: 194 HACAAKSGLLHSPHVASSLVDCFGKCISLADARKLFDDCSQRNVIVWNTMISLYCRSNNL 373
HA + KS L +P V +L+D +GKC+S++ ARKLFD+ QRN +VWN MIS Y +
Sbjct: 71 HAHSVKSNFLSNPFVGCALLDMYGKCLSVSHARKLFDEIPQRNAVVWNAMISHYTHCGKV 130
Query: 374 VGALQLFGLMDVQPTESSYNCIIAAL 451
A++L+ MDV P ESS+N II L
Sbjct: 131 KEAVELYEAMDVMPNESSFNAIIKGL 156
>ref|XP_002892165.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297338007|gb|EFH68424.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 429
Score = 129 bits (323), Expect = 5e-28
Identities = 66/143 (46%), Positives = 91/143 (63%)
Frame = +2
Query: 14 QLVTYTKLLASEGKQGRHHQALALFSEMFASPHIHLDPYVLPLVLKSAAALRLPLFMRAI 193
+L++ TK L+S QG H QAL LF +M +S + LD +V L LKS AA P+ ++
Sbjct: 11 KLISLTKQLSSYANQGFHEQALTLFRQMHSSFALPLDAHVFSLALKSCAAAFHPVLGGSV 70
Query: 194 HACAAKSGLLHSPHVASSLVDCFGKCISLADARKLFDDCSQRNVIVWNTMISLYCRSNNL 373
HA + KS L +P V +L+D +GKC+S+ ARKLFD+ QRN +VWN MIS Y +
Sbjct: 71 HAHSVKSNFLSNPFVGCALLDMYGKCLSVTHARKLFDEIPQRNAVVWNAMISHYTHCGKI 130
Query: 374 VGALQLFGLMDVQPTESSYNCII 442
A++L+ MDV P ESS+N II
Sbjct: 131 QEAVELYEAMDVMPNESSFNAII 153
>ref|XP_004981019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g03510-like [Setaria italica]
Length = 436
Score = 125 bits (315), Expect = 4e-27
Identities = 70/161 (43%), Positives = 99/161 (61%), Gaps = 7/161 (4%)
Frame = +2
Query: 2 NNHRQLVTYTKLLASEGKQGRHHQALALFSEMFASPHIH--LDP---YVLPLVLKSAAAL 166
+ HR+L + TKLL + RH AL+LFS M ++P + DP + PL +KSA AL
Sbjct: 3 SRHRRLASLTKLLTTHVNAARHRDALSLFSRMLSAPDLPPPTDPSFAHAFPLAIKSATAL 62
Query: 167 RLPLFMRAIHACAAKSGLLHSPHVASSLVDCFGKCISLAD--ARKLFDDCSQRNVIVWNT 340
R+P HA AAK GLL+SP +AS+L+ +G + AR+LFD+ RN IVW+
Sbjct: 63 RVPRAAAFFHAFAAKCGLLYSPFLASALIASYGAGAGASHELARRLFDELPARNAIVWSA 122
Query: 341 MISLYCRSNNLVGALQLFGLMDVQPTESSYNCIIAALSESG 463
MIS++ R+ +L+ A MDV PT S +N +IAA++ESG
Sbjct: 123 MISVHVRAGDLIAAASALDTMDVAPTASCFNTVIAAVAESG 163
Score = 65.9 bits (159), Expect = 5e-09
Identities = 39/155 (25%), Positives = 82/155 (52%), Gaps = 7/155 (4%)
Frame = +2
Query: 26 YTKLLASEGKQGRHH-QALALFSEMFASPHIHLDPYVLPLV--LKSAAALRLPLFMRAIH 196
+ ++A+ + G H +A+ ++ M + + P + L+ + + A+ ++ +H
Sbjct: 152 FNTVIAAVAESGEHPTRAIEVYRHM---RRVGVAPSFITLLALVPACTAMGALTSIKEVH 208
Query: 197 ACAAKSGLLHSPHVASSLVDCFGKCISLADARKLFDDCSQRNVIVWNTMISLYCRSNNLV 376
A + G+ H+ SSL++ +G+C SLA ++++F+ R+V+VW++++S Y
Sbjct: 209 GFAVRHGMSMRSHIGSSLIEAYGRCGSLAGSQRVFNQVQDRDVVVWSSLVSAYAFHGRAE 268
Query: 377 GALQLFGLM----DVQPTESSYNCIIAALSESGGA 469
A+ LF M DV+P + ++AA + SG A
Sbjct: 269 VAMSLFRHMKDQDDVRPDNIMFLSLLAACAHSGHA 303
>ref|XP_003560906.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g03510-like [Brachypodium distachyon]
Length = 438
Score = 125 bits (315), Expect = 4e-27
Identities = 77/162 (47%), Positives = 99/162 (61%), Gaps = 8/162 (4%)
Frame = +2
Query: 2 NNHRQLVTYTKLLASEGKQGRHHQALALFSEMFASPHIH--LDP---YVLPLVLKSAAAL 166
++HR+L + TK L S GRH ALA F+ M + P + DP Y PL LKSAAAL
Sbjct: 3 SSHRRLASLTKQLTSHVNAGRHRDALAFFARMASDPALPPLSDPSFAYAFPLALKSAAAL 62
Query: 167 RLPLFMRAIHACAAK-SGLLHSPHVASSLVDCFGKC--ISLADARKLFDDCSQRNVIVWN 337
R+P IHA A K GLL SP VAS+LV +G C S AR+LFD+ RN VW+
Sbjct: 63 RVPSAAATIHALAVKCGGLLCSPFVASALVASYGACGPSSPDVARRLFDELPCRNGFVWS 122
Query: 338 TMISLYCRSNNLVGALQLFGLMDVQPTESSYNCIIAALSESG 463
MIS+Y RS ++ A++ L+DV PT S +N +IAA+ ESG
Sbjct: 123 AMISVYARSGDVAAAVRALDLVDVAPTASCFNSVIAAVVESG 164
Score = 63.9 bits (154), Expect = 2e-08
Identities = 42/154 (27%), Positives = 83/154 (53%), Gaps = 6/154 (3%)
Frame = +2
Query: 26 YTKLLASEGKQGRHH-QALALFSEMFASPHIHLDPYVLPLV--LKSAAALRLPLFMRAIH 196
+ ++A+ + G H +A+ L+ M + ++P ++ L+ + + AL +R +H
Sbjct: 153 FNSVIAAVVESGEHPARAIELYRRMRG---LGVEPCLITLLALVPACTALGALNSVREVH 209
Query: 197 ACAAKSGLLHSPHVASSLVDCFGKCISLADARKLFDDCSQRNVIVWNTMISLYCRSNNLV 376
A + G+ S H+ SSL++ +G+C SL AR++FD +R+V+VW++++S Y
Sbjct: 210 GFAVRHGMSASCHLGSSLIEAYGRCGSLVAARRVFDKVDERDVVVWSSIVSAYAFHGLGD 269
Query: 377 GALQLFGLMD---VQPTESSYNCIIAALSESGGA 469
A+ LF M+ V+P + ++ A +G A
Sbjct: 270 VAMSLFRWMELDNVRPDGIMFLGVLKACGHAGHA 303