BLASTX nr result
ID: Zingiber23_contig00043840
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00043840
(697 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006826912.1| hypothetical protein AMTR_s00010p00163020 [A... 191 2e-46
ref|XP_004289443.1| PREDICTED: DNA repair protein complementing ... 187 4e-45
ref|XP_006430573.1| hypothetical protein CICLE_v10010990mg [Citr... 183 5e-44
ref|NP_001061843.1| Os08g0427500 [Oryza sativa Japonica Group] g... 182 7e-44
gb|EXC20633.1| DNA repair protein complementing XP-C cell [Morus... 182 9e-44
ref|XP_002305874.2| hypothetical protein POPTR_0004s08580g [Popu... 181 2e-43
ref|XP_004973475.1| PREDICTED: DNA repair protein complementing ... 180 3e-43
ref|XP_006482097.1| PREDICTED: DNA repair protein complementing ... 179 6e-43
ref|XP_006482096.1| PREDICTED: DNA repair protein complementing ... 179 6e-43
ref|XP_002444371.1| hypothetical protein SORBIDRAFT_07g020840 [S... 179 6e-43
gb|EEE68722.1| hypothetical protein OsJ_27387 [Oryza sativa Japo... 179 7e-43
ref|XP_002275277.1| PREDICTED: DNA repair protein complementing ... 179 1e-42
ref|XP_003572211.1| PREDICTED: DNA repair protein complementing ... 178 2e-42
gb|EMS61539.1| DNA repair protein complementing XP-C cells-like ... 175 1e-41
ref|XP_002531915.1| DNA repair protein xp-C / rad4, putative [Ri... 174 2e-41
ref|XP_006660145.1| PREDICTED: DNA repair protein complementing ... 172 7e-41
ref|XP_006596501.1| PREDICTED: DNA repair protein complementing ... 172 1e-40
gb|EOY03915.1| DNA repair protein xp-C / rad4, putative isoform ... 172 1e-40
gb|EOY03914.1| DNA repair protein xp-C / rad4, putative isoform ... 172 1e-40
ref|XP_003544368.1| PREDICTED: DNA repair protein complementing ... 172 1e-40
>ref|XP_006826912.1| hypothetical protein AMTR_s00010p00163020 [Amborella trichopoda]
gi|548831341|gb|ERM94149.1| hypothetical protein
AMTR_s00010p00163020 [Amborella trichopoda]
Length = 918
Score = 191 bits (485), Expect = 2e-46
Identities = 111/259 (42%), Positives = 152/259 (58%), Gaps = 28/259 (10%)
Frame = -3
Query: 695 LTTRFVSVLDVASLKPDTDMIGITKQDT------------------GSLDIKISSPSTSV 570
L+TRF+++LDV SLKPD D + + G + K+ SP S+
Sbjct: 218 LSTRFLAMLDVTSLKPDADQAVYSSPEADDSVKGRTFNSSRPIANLGDVFAKL-SPQASL 276
Query: 569 LVPHQIDVPSDVKSLDKTNDHIDLASTSRACNDQ--------LNSC--ATNLAQVSKRKG 420
H+ + D+ N+ + + D+ +SC TN +VSKRKG
Sbjct: 277 ---HKRKLNEDIGLTSPQNEGKHIKENDTSSKDKRTGYKSSDAHSCNLETNHFKVSKRKG 333
Query: 419 DMEFVLELERAISATAAAVPDDKVDSKSDELPDCSVAPTTSVKMLRQNNAVDXXXXXXXX 240
D+EF L++E A+SATAA V + KV+ + + P S TT+ K+ + +
Sbjct: 334 DVEFELQMEMALSATAAGVFESKVEQEMQQKPHSS--STTNSKLNIKEKKLKSEVISERN 391
Query: 239 SGALWSRRTGPPLYWAEVYCNGESSTGRWVHVDAANAVIDGSEKVESAAAACRKPLRYVV 60
S A+WSR+ GPPLYWAEVYCNGE+ +GRWVHVDAAN+++DG KVE+A AACR+ LRYVV
Sbjct: 392 SFAVWSRKMGPPLYWAEVYCNGETLSGRWVHVDAANSIVDGEHKVEAAVAACRRSLRYVV 451
Query: 59 AFAGKGAKDVTRRYCMHWY 3
AF+G+GAKDVTRRYCM WY
Sbjct: 452 AFSGRGAKDVTRRYCMRWY 470
>ref|XP_004289443.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
[Fragaria vesca subsp. vesca]
Length = 919
Score = 187 bits (474), Expect = 4e-45
Identities = 107/238 (44%), Positives = 148/238 (62%), Gaps = 7/238 (2%)
Frame = -3
Query: 695 LTTRFVSVLDVASLKPDTDMIGITKQDTGSLDIKISSPSTSVLVPHQIDVP----SDVKS 528
LTTR VSVL+VASLKP+ D + +D L I S +T ++ + V S+ S
Sbjct: 259 LTTRLVSVLNVASLKPEADKTDWSSEDASRLSKGIFSTATPMVARKNVPVSPATSSERNS 318
Query: 527 LDKTNDHIDLASTSRAC---NDQLNSCATNLAQVSKRKGDMEFVLELERAISATAAAVPD 357
+ +T I + AC ND +C T ++ KR+GD+EF ++++ A+SATA D
Sbjct: 319 VGET-PQIGSYKYTLACEEWNDISEACHTKKSKELKRRGDLEFEMQMQMALSATAVPTAD 377
Query: 356 DKVDSKSDELPDCSVAPTTSVKMLRQNNAVDXXXXXXXXSGALWSRRTGPPLYWAEVYCN 177
K+ S +++ D +VA K L++ + S A+ SR+ G PLYWAEVYCN
Sbjct: 378 IKLGSDNND-SDSNVA-----KRLKRTVCEESQFSSQSISTAVGSRKEGSPLYWAEVYCN 431
Query: 176 GESSTGRWVHVDAANAVIDGSEKVESAAAACRKPLRYVVAFAGKGAKDVTRRYCMHWY 3
GE+ TG+W+H+DA NA+IDG +KVE+ AAAC+ PLRYVVAFAG GAKDVTRRYC+ WY
Sbjct: 432 GENLTGKWLHIDAINAIIDGEQKVEAVAAACKTPLRYVVAFAGNGAKDVTRRYCLKWY 489
>ref|XP_006430573.1| hypothetical protein CICLE_v10010990mg [Citrus clementina]
gi|557532630|gb|ESR43813.1| hypothetical protein
CICLE_v10010990mg [Citrus clementina]
Length = 974
Score = 183 bits (464), Expect = 5e-44
Identities = 115/270 (42%), Positives = 154/270 (57%), Gaps = 39/270 (14%)
Frame = -3
Query: 695 LTTRFVSVLDVASLKPDTDMIGITKQDTGSLDIKI-SSPSTSVLVPHQIDVPSDVKSL-- 525
LTTRFVS+LDVASLKP+ D + QD+ + I ++P+ V P ++ + S VKS
Sbjct: 285 LTTRFVSILDVASLKPEADKNVSSNQDSSRVGGGIFNAPTLMVAKPEEV-LASPVKSFSC 343
Query: 524 DKTNDHIDLAS-----------------------------------TSRACNDQLNSC-A 453
DK + + +S +S AC+D +C
Sbjct: 344 DKKENVCETSSKGLPECKYSSPKSNNTQSKKSPVSCELSSRNLDPSSSMACSDISEACHP 403
Query: 452 TNLAQVSKRKGDMEFVLELERAISATAAAVPDDKVDSKSDELPDCSVAPTTSVKMLRQNN 273
+Q KRKGD+EF ++LE A+SAT A + S +L S + SVK L++
Sbjct: 404 KEKSQALKRKGDLEFEMQLEMALSATNVATSKSNICSDVKDLNSNS-STVLSVKRLKKIE 462
Query: 272 AVDXXXXXXXXSGALWSRRTGPPLYWAEVYCNGESSTGRWVHVDAANAVIDGSEKVESAA 93
+ + S A+ SR+ G PLYWAEVYC+GE+ TG+WVHVDAANA+IDG +KVE+AA
Sbjct: 463 SGESSTSCLGISTAVGSRKVGAPLYWAEVYCSGENLTGKWVHVDAANAIIDGEQKVEAAA 522
Query: 92 AACRKPLRYVVAFAGKGAKDVTRRYCMHWY 3
AAC+ LRY+VAFAG GAKDVTRRYCM WY
Sbjct: 523 AACKTSLRYIVAFAGCGAKDVTRRYCMKWY 552
>ref|NP_001061843.1| Os08g0427500 [Oryza sativa Japonica Group]
gi|38175490|dbj|BAD01186.1| putative xeroderma
pigmentosum group C protein [Oryza sativa Japonica Group]
gi|38175770|dbj|BAD01464.1| putative xeroderma
pigmentosum group C protein [Oryza sativa Japonica Group]
gi|113623812|dbj|BAF23757.1| Os08g0427500 [Oryza sativa
Japonica Group]
Length = 880
Score = 182 bits (463), Expect = 7e-44
Identities = 112/263 (42%), Positives = 152/263 (57%), Gaps = 32/263 (12%)
Frame = -3
Query: 695 LTTRFVSVLDVASLKPDTDMIGITKQDTGSLDIKISSPSTSVLVPH-------------- 558
LT RFV+ LDVA LKPDT +G + QD L K + PS+S + H
Sbjct: 264 LTARFVANLDVAGLKPDTKSMGTSNQDEPRLCTK-ALPSSSFVAGHNEYNNLSPVLSQNN 322
Query: 557 ----------QIDVPSDVKSLDK------TNDHIDLASTSR--ACNDQLNSCATNLAQVS 432
Q+ V KSL K N AS S+ + + Q S ++N A+V
Sbjct: 323 TEGSINTTPKQVKVQGCRKSLSKKLSKCKANQRDSSASLSKDSSSSSQYPSTSSN-AEVP 381
Query: 431 KRKGDMEFVLELERAISATAAAVPDDKVDSKSDELPDCSVAPTTSVKMLRQNNAVDXXXX 252
+RKGD+EF L+LE A+ A+AA D+K+ ++ ++ D ++ T +K LR++
Sbjct: 382 RRKGDLEFELQLEMALLASAAKSQDNKLATQLNQSTDSLLSSTPPLKKLRKSEEASSNS- 440
Query: 251 XXXXSGALWSRRTGPPLYWAEVYCNGESSTGRWVHVDAANAVIDGSEKVESAAAACRKPL 72
+WSR P L+WAEV+C GE+S+GRWVHVD AN +IDG +KVE+A+A CRKPL
Sbjct: 441 -----SVVWSRNRAP-LFWAEVFCGGEASSGRWVHVDVANDIIDGEQKVEAASAVCRKPL 494
Query: 71 RYVVAFAGKGAKDVTRRYCMHWY 3
RYVVAFAG GAKDVTRRYC+ W+
Sbjct: 495 RYVVAFAGNGAKDVTRRYCLQWH 517
>gb|EXC20633.1| DNA repair protein complementing XP-C cell [Morus notabilis]
Length = 962
Score = 182 bits (462), Expect = 9e-44
Identities = 114/265 (43%), Positives = 149/265 (56%), Gaps = 34/265 (12%)
Frame = -3
Query: 695 LTTRFVSVLDVASLKPDTDMIGITKQDTGSLDIKISSP-----STSVLVPHQIDVPSDVK 531
L TRFVS+LDVASLKPD D QD G S+P + + P + P++
Sbjct: 268 LITRFVSILDVASLKPDGDKSAYFSQDAGGFIFCTSTPMVAKKNEASSSPSKSFSPNEKD 327
Query: 530 SLDKTN----------DHIDLASTSRACN------------DQLNSCATNLAQVSKRKGD 417
S +T+ + D AS + + N D +C T ++Q KRKGD
Sbjct: 328 SACETSHRSSCKRSNAESKDSASANESSNKQPCPLVFELKHDSSGACHTQISQGPKRKGD 387
Query: 416 MEFVLELERAISATAAAVP---DDKVDSK----SDELPDCSVAPTTSVKMLRQNNAVDXX 258
+EF L++E AISATAA + D K+ S + LP+ ++P +K + +
Sbjct: 388 IEFSLQMEMAISATAAVIANIADGKMGSSMGNPNSNLPNF-ISPFKRMKKVLSEGSSSSH 446
Query: 257 XXXXXXSGALWSRRTGPPLYWAEVYCNGESSTGRWVHVDAANAVIDGSEKVESAAAACRK 78
A+ SRR G PLYWAEVYC+GE+ TG+WVHVDA NA+ID EKVE+ AAAC++
Sbjct: 447 GIST----AIGSRRVGSPLYWAEVYCSGENLTGKWVHVDAVNAIIDEEEKVEALAAACKR 502
Query: 77 PLRYVVAFAGKGAKDVTRRYCMHWY 3
LRYVVAFAG GAKDVTRRYCM WY
Sbjct: 503 SLRYVVAFAGNGAKDVTRRYCMKWY 527
>ref|XP_002305874.2| hypothetical protein POPTR_0004s08580g [Populus trichocarpa]
gi|550340612|gb|EEE86385.2| hypothetical protein
POPTR_0004s08580g [Populus trichocarpa]
Length = 898
Score = 181 bits (459), Expect = 2e-43
Identities = 107/247 (43%), Positives = 143/247 (57%), Gaps = 16/247 (6%)
Frame = -3
Query: 695 LTTRFVSVLDVASLKPDTDMIGITKQDTGSLDIKISSPSTSVLV-PHQIDVPSDVKSLDK 519
LTTRFVS+LDVAS+KPD D Q T + I + ST ++ P ++ +P S ++
Sbjct: 264 LTTRFVSILDVASIKPDADKYESLSQGTSKMHRGIFNTSTLMVDRPKEVFIPPKSLSCNE 323
Query: 518 TNDHIDLASTSRA------------CNDQLNS---CATNLAQVSKRKGDMEFVLELERAI 384
+ I + A C Q N+ C T +Q SKRKGD+EF ++L+ A+
Sbjct: 324 KKNKIQSNDSPPAVELKDKMVDTFPCEAQNNTSEECVTKKSQGSKRKGDLEFEMQLQMAM 383
Query: 383 SATAAAVPDDKVDSKSDELPDCSVAPTTSVKMLRQNNAVDXXXXXXXXSGALWSRRTGPP 204
SATA A +K ++ + S + S R + S AL SR+ G P
Sbjct: 384 SATAVATQSNK----ELDVKESSNSSDVSSPFKRIRKIANEESSSQGISTALGSRKIGSP 439
Query: 203 LYWAEVYCNGESSTGRWVHVDAANAVIDGSEKVESAAAACRKPLRYVVAFAGKGAKDVTR 24
LYWAEVYC+GE+ TG+WVHVDA + ++DG +KVE+AA AC+ LRYVVAFAG GAKDVTR
Sbjct: 440 LYWAEVYCSGENLTGKWVHVDAVHDIVDGEQKVEAAADACKTSLRYVVAFAGLGAKDVTR 499
Query: 23 RYCMHWY 3
RYCM WY
Sbjct: 500 RYCMKWY 506
>ref|XP_004973475.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
[Setaria italica]
Length = 863
Score = 180 bits (457), Expect = 3e-43
Identities = 112/260 (43%), Positives = 144/260 (55%), Gaps = 29/260 (11%)
Frame = -3
Query: 695 LTTRFVSVLDVASLKPDTDMIGITKQDTGSLDIK-------------ISSPST------- 576
LT RFV+ LDVA LKPDT ++G QD L + +SSP+
Sbjct: 256 LTARFVTNLDVAGLKPDTKVMGTLNQDASRLCTRSLPYSSPAADGNVVSSPALLKDNTQD 315
Query: 575 SVLVPHQIDVPSDVK-------SLDKTNDHI--DLASTSRACNDQLNSCATNLAQVSKRK 423
SV + Q P K SL KT I D S+ + + QL S + N A+V KRK
Sbjct: 316 SVNMNQQRGGPGKSKQTSSCKRSLSKTLSSIKADNESSCISASSQLPSTSGN-AEVPKRK 374
Query: 422 GDMEFVLELERAISATAAAVPDDKVDSKSDELPDCSVAPTTSVKMLRQNNAVDXXXXXXX 243
GD+EF L+LE A+SATAA ++ + + T +K LRQN
Sbjct: 375 GDVEFELQLEMALSATAAETQNNNQATHMSQSISSLQDSTPPMKKLRQNTEATSTS---- 430
Query: 242 XSGALWSRRTGPPLYWAEVYCNGESSTGRWVHVDAANAVIDGSEKVESAAAACRKPLRYV 63
A+WSR G PLYWAEVYC+G++STGRWVH D N ++D KVE+++A C+KPLRY
Sbjct: 431 --SAVWSRSAGAPLYWAEVYCSGQASTGRWVHADVVNDLLDAERKVEASSAVCKKPLRYA 488
Query: 62 VAFAGKGAKDVTRRYCMHWY 3
VAFAG GAKDVTRRYC+ W+
Sbjct: 489 VAFAGNGAKDVTRRYCLQWH 508
>ref|XP_006482097.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
isoform X2 [Citrus sinensis]
Length = 954
Score = 179 bits (455), Expect = 6e-43
Identities = 113/270 (41%), Positives = 152/270 (56%), Gaps = 39/270 (14%)
Frame = -3
Query: 695 LTTRFVSVLDVASLKPDTDMIGITKQDTGSLDIKI-SSPSTSVLVPHQIDVPSDVKSL-- 525
LTTRFVS+LDVASLKP+ D + QD+ + I ++P+ V P ++ + S VKS
Sbjct: 265 LTTRFVSILDVASLKPEADKNVSSNQDSSRVGGGIFNAPTLMVAKPEEV-LASPVKSFSC 323
Query: 524 DKTNDHIDLAS-----------------------------------TSRACNDQLNSC-A 453
DK + + +S +S AC+D +C
Sbjct: 324 DKKENVCETSSKGSPEYKYSSPKSNNTQSKKSPVSRELSSRNLDPSSSMACSDISEACHP 383
Query: 452 TNLAQVSKRKGDMEFVLELERAISATAAAVPDDKVDSKSDELPDCSVAPTTSVKMLRQNN 273
+Q KRKGD+EF ++LE A+SAT + S +L S + VK L++
Sbjct: 384 KEKSQALKRKGDLEFEMQLEMALSATNVGTSKSNICSDVKDLNSNS-STVLPVKRLKKIE 442
Query: 272 AVDXXXXXXXXSGALWSRRTGPPLYWAEVYCNGESSTGRWVHVDAANAVIDGSEKVESAA 93
+ + S A+ SR+ G PLYWAEVYC+GE+ TG+WVHVDAANA+IDG +KVE+AA
Sbjct: 443 SGESSTSCLGISTAVGSRKVGAPLYWAEVYCSGENLTGKWVHVDAANAIIDGEQKVEAAA 502
Query: 92 AACRKPLRYVVAFAGKGAKDVTRRYCMHWY 3
AAC+ LRY+VAFAG GAKDVTRRYCM WY
Sbjct: 503 AACKTSLRYIVAFAGCGAKDVTRRYCMKWY 532
>ref|XP_006482096.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
isoform X1 [Citrus sinensis]
Length = 974
Score = 179 bits (455), Expect = 6e-43
Identities = 113/270 (41%), Positives = 152/270 (56%), Gaps = 39/270 (14%)
Frame = -3
Query: 695 LTTRFVSVLDVASLKPDTDMIGITKQDTGSLDIKI-SSPSTSVLVPHQIDVPSDVKSL-- 525
LTTRFVS+LDVASLKP+ D + QD+ + I ++P+ V P ++ + S VKS
Sbjct: 285 LTTRFVSILDVASLKPEADKNVSSNQDSSRVGGGIFNAPTLMVAKPEEV-LASPVKSFSC 343
Query: 524 DKTNDHIDLAS-----------------------------------TSRACNDQLNSC-A 453
DK + + +S +S AC+D +C
Sbjct: 344 DKKENVCETSSKGSPEYKYSSPKSNNTQSKKSPVSRELSSRNLDPSSSMACSDISEACHP 403
Query: 452 TNLAQVSKRKGDMEFVLELERAISATAAAVPDDKVDSKSDELPDCSVAPTTSVKMLRQNN 273
+Q KRKGD+EF ++LE A+SAT + S +L S + VK L++
Sbjct: 404 KEKSQALKRKGDLEFEMQLEMALSATNVGTSKSNICSDVKDLNSNS-STVLPVKRLKKIE 462
Query: 272 AVDXXXXXXXXSGALWSRRTGPPLYWAEVYCNGESSTGRWVHVDAANAVIDGSEKVESAA 93
+ + S A+ SR+ G PLYWAEVYC+GE+ TG+WVHVDAANA+IDG +KVE+AA
Sbjct: 463 SGESSTSCLGISTAVGSRKVGAPLYWAEVYCSGENLTGKWVHVDAANAIIDGEQKVEAAA 522
Query: 92 AACRKPLRYVVAFAGKGAKDVTRRYCMHWY 3
AAC+ LRY+VAFAG GAKDVTRRYCM WY
Sbjct: 523 AACKTSLRYIVAFAGCGAKDVTRRYCMKWY 552
>ref|XP_002444371.1| hypothetical protein SORBIDRAFT_07g020840 [Sorghum bicolor]
gi|241940721|gb|EES13866.1| hypothetical protein
SORBIDRAFT_07g020840 [Sorghum bicolor]
Length = 860
Score = 179 bits (455), Expect = 6e-43
Identities = 111/264 (42%), Positives = 144/264 (54%), Gaps = 33/264 (12%)
Frame = -3
Query: 695 LTTRFVSVLDVASLKPDTDMIGITKQDTGSLDIKISSPSTSVLVPHQIDVPSDVK----- 531
LT RFV+ LDVA LKPDT + G QD L + S+ + I P+ +K
Sbjct: 251 LTARFVTNLDVAGLKPDTKVKGTFSQDASRLCTRALPCSSPFSDDNMITTPALMKDNSQG 310
Query: 530 ----------------------SLDKT-----NDH-IDLASTSRACNDQLNSCATNLAQV 435
SL KT +DH ASTS+ + ++N A+V
Sbjct: 311 SVSMNQQRGDLGKLKQDSACKRSLSKTLSVIKSDHESSCASTSKDKSASNQFPSSNDAEV 370
Query: 434 SKRKGDMEFVLELERAISATAAAVPDDKVDSKSDELPDCSVAPTTSVKMLRQNNAVDXXX 255
KRKGD+EF L+LE A+SATAA + K+ + + + +K +RQN
Sbjct: 371 PKRKGDVEFELQLEMALSATAAETQNSKLATHMSQSTVSLQNSSPPLKKMRQN------V 424
Query: 254 XXXXXSGALWSRRTGPPLYWAEVYCNGESSTGRWVHVDAANAVIDGSEKVESAAAACRKP 75
S A+WSR G PLYWAEVYC G++STGRWVHVD N +ID KVE+++A C+KP
Sbjct: 425 EAVSSSSAIWSRSAGAPLYWAEVYCGGQASTGRWVHVDVVNDLIDAERKVETSSAVCKKP 484
Query: 74 LRYVVAFAGKGAKDVTRRYCMHWY 3
LRYVVAFAG GAKDVTRRYC+ W+
Sbjct: 485 LRYVVAFAGNGAKDVTRRYCLQWH 508
>gb|EEE68722.1| hypothetical protein OsJ_27387 [Oryza sativa Japonica Group]
Length = 696
Score = 179 bits (454), Expect = 7e-43
Identities = 110/260 (42%), Positives = 150/260 (57%), Gaps = 32/260 (12%)
Frame = -3
Query: 686 RFVSVLDVASLKPDTDMIGITKQDTGSLDIKISSPSTSVLVPH----------------- 558
RFV+ LDVA LKPDT +G + QD L K + PS+S + H
Sbjct: 81 RFVANLDVAGLKPDTKSMGTSNQDEPRLCTK-ALPSSSFVAGHNEYNNLSPVLSQNNTEG 139
Query: 557 -------QIDVPSDVKSLDK------TNDHIDLASTSR--ACNDQLNSCATNLAQVSKRK 423
Q+ V KSL K N AS S+ + + Q S ++N A+V +RK
Sbjct: 140 SINTTPKQVKVQGCRKSLSKKLSKCKANQRDSSASLSKDSSSSSQYPSTSSN-AEVPRRK 198
Query: 422 GDMEFVLELERAISATAAAVPDDKVDSKSDELPDCSVAPTTSVKMLRQNNAVDXXXXXXX 243
GD+EF L+LE A+ A+AA D+K+ ++ ++ D ++ T +K LR++
Sbjct: 199 GDLEFELQLEMALLASAAKSQDNKLATQLNQSTDSLLSSTPPLKKLRKSEEASSNS---- 254
Query: 242 XSGALWSRRTGPPLYWAEVYCNGESSTGRWVHVDAANAVIDGSEKVESAAAACRKPLRYV 63
+WSR P L+WAEV+C GE+S+GRWVHVD AN +IDG +KVE+A+A CRKPLRYV
Sbjct: 255 --SVVWSRNRAP-LFWAEVFCGGEASSGRWVHVDVANDIIDGEQKVEAASAVCRKPLRYV 311
Query: 62 VAFAGKGAKDVTRRYCMHWY 3
VAFAG GAKDVTRRYC+ W+
Sbjct: 312 VAFAGNGAKDVTRRYCLQWH 331
>ref|XP_002275277.1| PREDICTED: DNA repair protein complementing XP-C cells-like [Vitis
vinifera]
Length = 1103
Score = 179 bits (453), Expect = 1e-42
Identities = 112/268 (41%), Positives = 148/268 (55%), Gaps = 37/268 (13%)
Frame = -3
Query: 695 LTTRFVSVLDVASLKPDTD---------------------MIGITKQDTGSLDIKISSPS 579
LTTRFVS+LDVA LKP D ++ K S +K SS
Sbjct: 444 LTTRFVSILDVAPLKPGADKSESAIQNANRASGGIFDNSTLMVARKNQVSSSPVKSSSCH 503
Query: 578 T--SVLVPHQIDVPS--DVKSLDKTNDHIDLAST---------SRACNDQL---NSCATN 447
+V P Q + + D+KS KT D + S AC +Q C T+
Sbjct: 504 VKGNVCEPSQNNACTNKDLKSTRKTAQSTDSPISDQLNDRMLDSLACKEQFAISEDCITD 563
Query: 446 LAQVSKRKGDMEFVLELERAISATAAAVPDDKVDSKSDELPDCSVAPTTSVKMLRQNNAV 267
+ SKRKGD+EF ++LE A+SATA + + S EL S + ++ +K +++
Sbjct: 564 KPEGSKRKGDLEFKMQLEMALSATAVGINESNGGSNVKELFSESSSFSSPLKRVKRIKIE 623
Query: 266 DXXXXXXXXSGALWSRRTGPPLYWAEVYCNGESSTGRWVHVDAANAVIDGSEKVESAAAA 87
+ S A+ SR+ G PLYWAEV+C GE+ TG+WVH+DA NA+IDG EKVE+AAAA
Sbjct: 624 EYPTPSQGISTAVGSRKIGAPLYWAEVFCTGENLTGKWVHIDAINAIIDGEEKVEAAAAA 683
Query: 86 CRKPLRYVVAFAGKGAKDVTRRYCMHWY 3
C+ LRYVVAF+G GAKDVTRRYCM WY
Sbjct: 684 CKTSLRYVVAFSGNGAKDVTRRYCMKWY 711
>ref|XP_003572211.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
[Brachypodium distachyon]
Length = 889
Score = 178 bits (451), Expect = 2e-42
Identities = 106/267 (39%), Positives = 145/267 (54%), Gaps = 36/267 (13%)
Frame = -3
Query: 695 LTTRFVSVLDVASLKPDTDMIGITKQDTGSLDIKISSPSTSVLVPHQIDVPSDVKSLDKT 516
LT RFV+ +DV LKPD +G QD L + + PS+SV + + S +S D T
Sbjct: 270 LTARFVTNMDVVGLKPDAKGMGTPNQDGPRLSTR-ALPSSSVAGHEEFNTLSPARSQDNT 328
Query: 515 NDHIDLASTS-------------RACNDQLNSC-----------------------ATNL 444
I +A R+ + L++C +
Sbjct: 329 KRGISMAKQQCNLGNLKRTSACRRSLSKNLSNCNAADGSSFASTSNGESSRSPCPLTPST 388
Query: 443 AQVSKRKGDMEFVLELERAISATAAAVPDDKVDSKSDELPDCSVAPTTSVKMLRQNNAVD 264
A++ KR+GD+EF L+LE A+SATAA ++K+ + S + + T +K LR+N V+
Sbjct: 389 AEMKKRRGDVEFELQLEMALSATAADSKENKLATTSSQSTGSLLYSTPPLKKLRKNAEVE 448
Query: 263 XXXXXXXXSGALWSRRTGPPLYWAEVYCNGESSTGRWVHVDAANAVIDGSEKVESAAAAC 84
A+WSR P LYWAEVYC G++STGRW+HVD N +IDG KVE+A+A C
Sbjct: 449 SNS------SAVWSRSRAP-LYWAEVYCGGQTSTGRWLHVDVVNDIIDGERKVEAASAVC 501
Query: 83 RKPLRYVVAFAGKGAKDVTRRYCMHWY 3
RKPLRYVV FAG GAKDVTRRYC+ W+
Sbjct: 502 RKPLRYVVGFAGGGAKDVTRRYCLQWH 528
>gb|EMS61539.1| DNA repair protein complementing XP-C cells-like protein [Triticum
urartu]
Length = 895
Score = 175 bits (444), Expect = 1e-41
Identities = 107/262 (40%), Positives = 150/262 (57%), Gaps = 34/262 (12%)
Frame = -3
Query: 686 RFVSVLDVASLKPDTDMIGITKQDTGSLDIKISSPSTSV---------LVPHQIDVPSDV 534
RFV+ +DV LKPD +G QD L + + P +SV L P +++V ++
Sbjct: 284 RFVTNMDVVGLKPDAKAVGTPNQDGTRLSTR-ALPCSSVAAGHNEFNTLSPARLEVNTE- 341
Query: 533 KSLDKTNDHIDLASTSR--ACND---QLNSC--------------------ATNLAQVSK 429
S ++T DL + R AC L++C ++ A++ K
Sbjct: 342 HSFNRTKQRGDLGNLKRTSACKSLSKNLSNCKADQYASTSKDESSSSSNPFTSSTAEIPK 401
Query: 428 RKGDMEFVLELERAISATAAAVPDDKVDSKSDELPDCSVAPTTSVKMLRQNNAVDXXXXX 249
RKGD+EF L+L+ A+SAT A + + + S + ++ +T +K LR+N V
Sbjct: 402 RKGDVEFELQLQMALSATGAEIQEKLAATSSQSIG--TLLDSTPLKKLRKNAEV------ 453
Query: 248 XXXSGALWSRRTGPPLYWAEVYCNGESSTGRWVHVDAANAVIDGSEKVESAAAACRKPLR 69
S A+WSR +GPPLYWAEVYC G++ TGRWVHVD N +IDG KVE+A+A CRKPLR
Sbjct: 454 ASNSSAVWSR-SGPPLYWAEVYCGGQTLTGRWVHVDVVNDIIDGERKVEAASAVCRKPLR 512
Query: 68 YVVAFAGKGAKDVTRRYCMHWY 3
YV+AFAG GAKDVTRRYC+ W+
Sbjct: 513 YVIAFAGGGAKDVTRRYCLQWH 534
>ref|XP_002531915.1| DNA repair protein xp-C / rad4, putative [Ricinus communis]
gi|223528425|gb|EEF30459.1| DNA repair protein xp-C /
rad4, putative [Ricinus communis]
Length = 683
Score = 174 bits (441), Expect = 2e-41
Identities = 104/254 (40%), Positives = 146/254 (57%), Gaps = 26/254 (10%)
Frame = -3
Query: 686 RFVSVLDVASLKPDTDMIGITKQDTGSLDIKISSPSTSVLVPHQIDVPSDVKSLDKTNDH 507
RFVS+LDVAS+KPD D QD S D + +++++V +V K L N+
Sbjct: 153 RFVSILDVASIKPDADKCESATQDM-SRDYRGVFNTSTLMVDRPKEVSMSPK-LFSCNEK 210
Query: 506 IDLASTSRA--------------CNDQL------------NSCATNLAQVSKRKGDMEFV 405
++ TS C L SC+++ +Q SKRKGD+EF
Sbjct: 211 SNVCETSAKASCISNYPRSKKTHCESPLAAAELENQTTASESCSSSKSQGSKRKGDLEFE 270
Query: 404 LELERAISATAAAVPDDKVDSKSDELPDCSVAPTTSVKMLRQNNAVDXXXXXXXXSGALW 225
++L+ A+SATA P + S L + + ++S+K ++ + + AL
Sbjct: 271 MQLQMALSATAIEAPQISMGSDVISLINDTSNISSSLKRIKMVGSEESPIHGIST--ALG 328
Query: 224 SRRTGPPLYWAEVYCNGESSTGRWVHVDAANAVIDGSEKVESAAAACRKPLRYVVAFAGK 45
SR+ G PLYWAEVYC+GE+ TG+WVH+DA NA++DG +KVE++AAAC+ LRYVVAFAG
Sbjct: 329 SRKIGSPLYWAEVYCSGENLTGKWVHIDAVNAIVDGEQKVEASAAACKTSLRYVVAFAGH 388
Query: 44 GAKDVTRRYCMHWY 3
GAKDVTRRYCM WY
Sbjct: 389 GAKDVTRRYCMKWY 402
>ref|XP_006660145.1| PREDICTED: DNA repair protein complementing XP-C cells homolog [Oryza
brachyantha]
Length = 875
Score = 172 bits (437), Expect = 7e-41
Identities = 107/263 (40%), Positives = 145/263 (55%), Gaps = 32/263 (12%)
Frame = -3
Query: 695 LTTRFVSVLDVASLKPDTDMIGITKQDTGSLDIKISSPSTSVLVPHQID---VPSDVKSL 525
LT RFV+ +DVA LKPDT + + QD L K + PS+S + H P +S
Sbjct: 260 LTARFVTNMDVAGLKPDTKSMETSNQDAPRLCTK-ALPSSSFVAGHNEHNNLSPVVSQSQ 318
Query: 524 DKTNDHIDLASTS---RACNDQLN------------SCA--------------TNLAQVS 432
D T D ID + C L+ SCA T+ A+V
Sbjct: 319 DNTEDSIDTTPKKHKVQGCKKSLSKKLSKCKADHGISCASQSKDSSSSSQYPSTSNAEVP 378
Query: 431 KRKGDMEFVLELERAISATAAAVPDDKVDSKSDELPDCSVAPTTSVKMLRQNNAVDXXXX 252
KRKGD EF L+LE A+ A+AA V D+++ + + D + T K L ++
Sbjct: 379 KRKGDWEFELQLEMALLASAAEVQDNELATHLNLSTDSILNSTPPFKKLNKSAEAPCNS- 437
Query: 251 XXXXSGALWSRRTGPPLYWAEVYCNGESSTGRWVHVDAANAVIDGSEKVESAAAACRKPL 72
+WSR +G PL+WAEV+C G++S+G+WVHVD N +IDG +K+E+A+A CRKPL
Sbjct: 438 -----STVWSR-SGAPLFWAEVFCGGQASSGKWVHVDVVNDIIDGEQKIEAASAVCRKPL 491
Query: 71 RYVVAFAGKGAKDVTRRYCMHWY 3
RYVVAFAG GAKDVTRRYC+ W+
Sbjct: 492 RYVVAFAGNGAKDVTRRYCLQWH 514
>ref|XP_006596501.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
isoform X2 [Glycine max]
Length = 915
Score = 172 bits (435), Expect = 1e-40
Identities = 108/260 (41%), Positives = 136/260 (52%), Gaps = 29/260 (11%)
Frame = -3
Query: 695 LTTRFVSVLDVASLKP--------------DTDMIGITKQDTGSLDIKISS--------- 585
LT RFVS+LDVA LKP T MI K D S IS
Sbjct: 265 LTARFVSILDVAPLKPVQVASGSSNGIFKTSTPMISKRKLDFKSPQESISCNEIENVCES 324
Query: 584 ------PSTSVLVPHQIDVPSDVKSLDKTNDHIDLASTSRACNDQLNSCATNLAQVSKRK 423
S + D SD +D ND + + S + C T+ + SKRK
Sbjct: 325 SLVHSRKSKKCHATNHTDQSSDPPVVDVRNDSVANSKASETRDSNSELCLTDKSHKSKRK 384
Query: 422 GDMEFVLELERAISATAAAVPDDKVDSKSDELPDCSVAPTTSVKMLRQNNAVDXXXXXXX 243
GD+EF ++LE A+SAT D K ++ ++ PD S S K +++ D
Sbjct: 385 GDIEFEMQLEMALSATTVECKDSKTEASAN--PDSSSFSCPS-KRVKRVIGEDSSTSPQV 441
Query: 242 XSGALWSRRTGPPLYWAEVYCNGESSTGRWVHVDAANAVIDGSEKVESAAAACRKPLRYV 63
S A+ S + G PLYWAEVYC+ E+ TG+WVHVDA N +IDG +KVES AAC+ LRYV
Sbjct: 442 ISTAIGSMKVGSPLYWAEVYCSEENLTGKWVHVDALNLIIDGEDKVESMVAACKTSLRYV 501
Query: 62 VAFAGKGAKDVTRRYCMHWY 3
VAFAG+GAKDVTRRYCM WY
Sbjct: 502 VAFAGQGAKDVTRRYCMKWY 521
>gb|EOY03915.1| DNA repair protein xp-C / rad4, putative isoform 2 [Theobroma cacao]
Length = 908
Score = 172 bits (435), Expect = 1e-40
Identities = 111/271 (40%), Positives = 147/271 (54%), Gaps = 41/271 (15%)
Frame = -3
Query: 692 TTRFVSVLDVASLKPDTDMIGITKQDTGSLDIKISSPSTSVLV-PHQIDVPS-------- 540
T RFVS+LDVASLKP+ D + Q+ + I S ST ++ P ++ S
Sbjct: 202 TARFVSILDVASLKPEADKCEPSSQEANRVGGGIFSTSTLMVANPKEVSSSSYPVKSFSC 261
Query: 539 -------------------------DVKSLDKT--NDHIDLASTSRACNDQLNS---CAT 450
D +S T ++ D S AC QL++ CA
Sbjct: 262 SEKDGHCENSLRSSCKSKGGCPTSNDTQSRYSTAVDEVTDRTSNLFACQAQLDTYGQCAP 321
Query: 449 NLAQVSKRKGDMEFVLELERAISATAAAVPDDKVDSK--SDELPDCSVAPTTSVKMLRQN 276
+Q KRKGD+EF ++L AISAT ++ S S+ + S+ +T K ++
Sbjct: 322 TKSQGLKRKGDLEFEMQLAMAISATTVGTLENSAGSLDVSNFNGNNSLDASTPSKRWKKI 381
Query: 275 NAVDXXXXXXXXSGALWSRRTGPPLYWAEVYCNGESSTGRWVHVDAANAVIDGSEKVESA 96
+ V+ S AL SR+ G PL+WAEVYC GE+ TG+WVHVDA NA+IDG +KVE A
Sbjct: 382 HRVESATSSQGLSTALGSRKVGSPLFWAEVYCGGENLTGKWVHVDALNAIIDGEQKVEDA 441
Query: 95 AAACRKPLRYVVAFAGKGAKDVTRRYCMHWY 3
AAAC+ LRYVVAFAG+GAKDVTRRYCM WY
Sbjct: 442 AAACKTALRYVVAFAGRGAKDVTRRYCMKWY 472
>gb|EOY03914.1| DNA repair protein xp-C / rad4, putative isoform 1 [Theobroma cacao]
Length = 974
Score = 172 bits (435), Expect = 1e-40
Identities = 111/271 (40%), Positives = 147/271 (54%), Gaps = 41/271 (15%)
Frame = -3
Query: 692 TTRFVSVLDVASLKPDTDMIGITKQDTGSLDIKISSPSTSVLV-PHQIDVPS-------- 540
T RFVS+LDVASLKP+ D + Q+ + I S ST ++ P ++ S
Sbjct: 268 TARFVSILDVASLKPEADKCEPSSQEANRVGGGIFSTSTLMVANPKEVSSSSYPVKSFSC 327
Query: 539 -------------------------DVKSLDKT--NDHIDLASTSRACNDQLNS---CAT 450
D +S T ++ D S AC QL++ CA
Sbjct: 328 SEKDGHCENSLRSSCKSKGGCPTSNDTQSRYSTAVDEVTDRTSNLFACQAQLDTYGQCAP 387
Query: 449 NLAQVSKRKGDMEFVLELERAISATAAAVPDDKVDSK--SDELPDCSVAPTTSVKMLRQN 276
+Q KRKGD+EF ++L AISAT ++ S S+ + S+ +T K ++
Sbjct: 388 TKSQGLKRKGDLEFEMQLAMAISATTVGTLENSAGSLDVSNFNGNNSLDASTPSKRWKKI 447
Query: 275 NAVDXXXXXXXXSGALWSRRTGPPLYWAEVYCNGESSTGRWVHVDAANAVIDGSEKVESA 96
+ V+ S AL SR+ G PL+WAEVYC GE+ TG+WVHVDA NA+IDG +KVE A
Sbjct: 448 HRVESATSSQGLSTALGSRKVGSPLFWAEVYCGGENLTGKWVHVDALNAIIDGEQKVEDA 507
Query: 95 AAACRKPLRYVVAFAGKGAKDVTRRYCMHWY 3
AAAC+ LRYVVAFAG+GAKDVTRRYCM WY
Sbjct: 508 AAACKTALRYVVAFAGRGAKDVTRRYCMKWY 538
>ref|XP_003544368.1| PREDICTED: DNA repair protein complementing XP-C cells homolog
isoform X1 [Glycine max]
Length = 926
Score = 172 bits (435), Expect = 1e-40
Identities = 108/260 (41%), Positives = 136/260 (52%), Gaps = 29/260 (11%)
Frame = -3
Query: 695 LTTRFVSVLDVASLKP--------------DTDMIGITKQDTGSLDIKISS--------- 585
LT RFVS+LDVA LKP T MI K D S IS
Sbjct: 276 LTARFVSILDVAPLKPVQVASGSSNGIFKTSTPMISKRKLDFKSPQESISCNEIENVCES 335
Query: 584 ------PSTSVLVPHQIDVPSDVKSLDKTNDHIDLASTSRACNDQLNSCATNLAQVSKRK 423
S + D SD +D ND + + S + C T+ + SKRK
Sbjct: 336 SLVHSRKSKKCHATNHTDQSSDPPVVDVRNDSVANSKASETRDSNSELCLTDKSHKSKRK 395
Query: 422 GDMEFVLELERAISATAAAVPDDKVDSKSDELPDCSVAPTTSVKMLRQNNAVDXXXXXXX 243
GD+EF ++LE A+SAT D K ++ ++ PD S S K +++ D
Sbjct: 396 GDIEFEMQLEMALSATTVECKDSKTEASAN--PDSSSFSCPS-KRVKRVIGEDSSTSPQV 452
Query: 242 XSGALWSRRTGPPLYWAEVYCNGESSTGRWVHVDAANAVIDGSEKVESAAAACRKPLRYV 63
S A+ S + G PLYWAEVYC+ E+ TG+WVHVDA N +IDG +KVES AAC+ LRYV
Sbjct: 453 ISTAIGSMKVGSPLYWAEVYCSEENLTGKWVHVDALNLIIDGEDKVESMVAACKTSLRYV 512
Query: 62 VAFAGKGAKDVTRRYCMHWY 3
VAFAG+GAKDVTRRYCM WY
Sbjct: 513 VAFAGQGAKDVTRRYCMKWY 532