BLASTX nr result

ID: Zingiber23_contig00043645 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00043645
         (315 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002450720.1| hypothetical protein SORBIDRAFT_05g015550 [S...    62   6e-08
gb|EOY11349.1| Cyclin family isoform 2 [Theobroma cacao]               62   8e-08
gb|EOY11348.1| Cyclin family isoform 1 [Theobroma cacao]               62   8e-08
ref|NP_001105636.1| microtubule-binding protein TANGLED1 [Zea ma...    59   9e-07
ref|XP_002439712.1| hypothetical protein SORBIDRAFT_09g018850 [S...    59   9e-07
gb|ACN36314.1| unknown [Zea mays] gi|413945173|gb|AFW77822.1| ta...    59   9e-07
ref|XP_004304996.1| PREDICTED: uncharacterized protein LOC101295...    58   1e-06
emb|CAN81981.1| hypothetical protein VITISV_042629 [Vitis vinifera]    58   1e-06
ref|XP_002284730.2| PREDICTED: uncharacterized protein LOC100259...    58   1e-06
emb|CBI36769.3| unnamed protein product [Vitis vinifera]               57   2e-06
ref|XP_004495727.1| PREDICTED: uncharacterized protein LOC101502...    57   3e-06
ref|XP_006472116.1| PREDICTED: microtubule-binding protein TANGL...    56   4e-06
ref|XP_006433321.1| hypothetical protein CICLE_v10003680mg, part...    56   4e-06
ref|XP_002328563.1| predicted protein [Populus trichocarpa] gi|5...    56   4e-06

>ref|XP_002450720.1| hypothetical protein SORBIDRAFT_05g015550 [Sorghum bicolor]
           gi|241936563|gb|EES09708.1| hypothetical protein
           SORBIDRAFT_05g015550 [Sorghum bicolor]
          Length = 159

 Score = 62.4 bits (150), Expect = 6e-08
 Identities = 42/109 (38%), Positives = 57/109 (52%), Gaps = 20/109 (18%)
 Frame = -3

Query: 286 PHKFLIKSPTASLGSQLATRKPGVAVVRVLKASPEKVVV------LKTRRRSFSPSKFVN 125
           PHKFL+KSP ++LGS+L      V  VR   A    + V       KTRR SFSPS+   
Sbjct: 47  PHKFLVKSPPSALGSKLRIHGKAVLPVRPTAAVSPPLPVKAQASPAKTRRCSFSPSRLAT 106

Query: 124 RMVSPLRTRIALPK-----TGI---------GLKQRPELGTPARIPAMK 20
           R+VSP++ R++L +     TG+         GLKQRP +    R  + K
Sbjct: 107 RLVSPIKARLSLNRSRDRDTGVGVAGGGPMSGLKQRPGVSLTVRTVSSK 155


>gb|EOY11349.1| Cyclin family isoform 2 [Theobroma cacao]
          Length = 361

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 42/97 (43%), Positives = 56/97 (57%), Gaps = 9/97 (9%)
 Frame = -3

Query: 313 RSRPPQTPPPHKFLIKSPTASLGSQLATRKPGVAVV------RVLKASPEKVVVLKTRRR 152
           R+R  QTP  HKFLIKSP ++   Q+  + P V  +       + K SP K+      RR
Sbjct: 258 RNRQAQTP--HKFLIKSPPSASKFQVKIKSPPVVSLSPTRSTNISKRSP-KLSAASKLRR 314

Query: 151 SFSPSKFVNRMVSPLRTRIALPKTG---IGLKQRPEL 50
           SFSPS+  NR+VSPL++R +  K+     GLKQRP L
Sbjct: 315 SFSPSRLANRLVSPLKSRKSFQKSDGPMSGLKQRPVL 351


>gb|EOY11348.1| Cyclin family isoform 1 [Theobroma cacao]
          Length = 364

 Score = 62.0 bits (149), Expect = 8e-08
 Identities = 42/97 (43%), Positives = 56/97 (57%), Gaps = 9/97 (9%)
 Frame = -3

Query: 313 RSRPPQTPPPHKFLIKSPTASLGSQLATRKPGVAVV------RVLKASPEKVVVLKTRRR 152
           R+R  QTP  HKFLIKSP ++   Q+  + P V  +       + K SP K+      RR
Sbjct: 261 RNRQAQTP--HKFLIKSPPSASKFQVKIKSPPVVSLSPTRSTNISKRSP-KLSAASKLRR 317

Query: 151 SFSPSKFVNRMVSPLRTRIALPKTG---IGLKQRPEL 50
           SFSPS+  NR+VSPL++R +  K+     GLKQRP L
Sbjct: 318 SFSPSRLANRLVSPLKSRKSFQKSDGPMSGLKQRPVL 354


>ref|NP_001105636.1| microtubule-binding protein TANGLED1 [Zea mays]
           gi|75172499|sp|Q9FUH9.1|TAN1_MAIZE RecName:
           Full=Microtubule-binding protein TANGLED1; AltName:
           Full=Protein PIGMY1 gi|11228986|gb|AAG33234.1|AF305892_1
           microtubule-binding protein TANGLED1 [Zea mays]
           gi|224033889|gb|ACN36020.1| unknown [Zea mays]
           gi|413945174|gb|AFW77823.1| tangled1 [Zea mays]
          Length = 386

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 42/106 (39%), Positives = 59/106 (55%), Gaps = 17/106 (16%)
 Frame = -3

Query: 286 PHKFLIKSPTASLGSQLATRKPGVAV-VRVLKASPEKVVVL-----KTRRRSFSPSKFVN 125
           PHKFL+KSP ++LGS+L  R  G A+  R    SP   V       KTRR SFSPS+   
Sbjct: 279 PHKFLVKSPPSALGSKL--RMHGKALPARPAAVSPPPPVKAQASPAKTRRCSFSPSRLAT 336

Query: 124 RMVSPLRTRIALPK---TGI--------GLKQRPELGTPARIPAMK 20
           R++SP++ R++L +   +G+        GLKQRP +    R  + K
Sbjct: 337 RLMSPIKARLSLGRSRDSGVGVGGGPMSGLKQRPGVSLTVRTVSSK 382


>ref|XP_002439712.1| hypothetical protein SORBIDRAFT_09g018850 [Sorghum bicolor]
           gi|241944997|gb|EES18142.1| hypothetical protein
           SORBIDRAFT_09g018850 [Sorghum bicolor]
          Length = 400

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 41/109 (37%), Positives = 56/109 (51%), Gaps = 20/109 (18%)
 Frame = -3

Query: 286 PHKFLIKSPTASLGSQLATRKPGVAVVR----VLKASPEKVVV--LKTRRRSFSPSKFVN 125
           PHKFL+KSP ++LGS+L      V   R    V    P K      KTRR SFSPS+   
Sbjct: 288 PHKFLVKSPPSALGSKLRIHGKAVLPARPAATVSPPPPVKAQASPAKTRRCSFSPSRLAT 347

Query: 124 RMVSPLRTRIALPK-----TGI---------GLKQRPELGTPARIPAMK 20
           R+VSP++ R++L +     +G+         GLKQRP +    R  + K
Sbjct: 348 RLVSPIKARLSLNRSRDRDSGVGVGGGGPMRGLKQRPGVSLTVRTVSSK 396


>gb|ACN36314.1| unknown [Zea mays] gi|413945173|gb|AFW77822.1| tangled1 [Zea mays]
          Length = 419

 Score = 58.5 bits (140), Expect = 9e-07
 Identities = 42/106 (39%), Positives = 59/106 (55%), Gaps = 17/106 (16%)
 Frame = -3

Query: 286 PHKFLIKSPTASLGSQLATRKPGVAV-VRVLKASPEKVVVL-----KTRRRSFSPSKFVN 125
           PHKFL+KSP ++LGS+L  R  G A+  R    SP   V       KTRR SFSPS+   
Sbjct: 312 PHKFLVKSPPSALGSKL--RMHGKALPARPAAVSPPPPVKAQASPAKTRRCSFSPSRLAT 369

Query: 124 RMVSPLRTRIALPK---TGI--------GLKQRPELGTPARIPAMK 20
           R++SP++ R++L +   +G+        GLKQRP +    R  + K
Sbjct: 370 RLMSPIKARLSLGRSRDSGVGVGGGPMSGLKQRPGVSLTVRTVSSK 415


>ref|XP_004304996.1| PREDICTED: uncharacterized protein LOC101295735 [Fragaria vesca
           subsp. vesca]
          Length = 370

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 42/102 (41%), Positives = 59/102 (57%), Gaps = 9/102 (8%)
 Frame = -3

Query: 298 QTPPPHKFLIKSPTASLGSQLATRKPG-VAVVRVLKA--SPEKVVVLKTRRRSFSPSKFV 128
           Q   PHKFLIKSP ++   Q+  + P  ++ +   KA  SP+K  V K  RRSFSPS+  
Sbjct: 269 QIQTPHKFLIKSPASASKFQVKIKSPPLISSLSPTKAKKSPKKSAVSKL-RRSFSPSRLA 327

Query: 127 NRMV--SPLRTRIALPKTGI----GLKQRPELGTPARIPAMK 20
            R+V  SPL++R ++ K+ +    GLKQRP    P  I A +
Sbjct: 328 TRLVSLSPLKSRKSVQKSEVVIMPGLKQRPTSSMPLGISARR 369


>emb|CAN81981.1| hypothetical protein VITISV_042629 [Vitis vinifera]
          Length = 1239

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 40/97 (41%), Positives = 53/97 (54%), Gaps = 12/97 (12%)
 Frame = -3

Query: 286  PHKFLIKSPTASLGSQLATRKPGVAV-----VRVLKASPEKVVVLKTRRRSFSPSKFVNR 122
            PHKFLIKSP ++  SQ+  +   V++       + K S  KV      RRSFSPS+  NR
Sbjct: 1138 PHKFLIKSPPSASKSQVKIKNLPVSISPTRSTALGKKSSPKVSAAVKFRRSFSPSRLANR 1197

Query: 121  MVSPLRTRIALPKTG-----IGLKQRP--ELGTPARI 32
            +VSPL+ R  + K+       GLKQRP   L  P R+
Sbjct: 1198 LVSPLKNRKCVQKSDGLMMMSGLKQRPASSLVMPTRL 1234


>ref|XP_002284730.2| PREDICTED: uncharacterized protein LOC100259649 [Vitis vinifera]
          Length = 357

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 40/98 (40%), Positives = 53/98 (54%), Gaps = 13/98 (13%)
 Frame = -3

Query: 286 PHKFLIKSPTASLGSQLATRKPGVAV------VRVLKASPEKVVVLKTRRRSFSPSKFVN 125
           PHKFLIKSP ++  SQ+  +   V++        + K S  KV      RRSFSPS+  N
Sbjct: 255 PHKFLIKSPPSASKSQVKIKNLPVSISPTRSTTALGKKSSPKVSAAVKFRRSFSPSRLAN 314

Query: 124 RMVSPLRTRIALPKTG-----IGLKQRP--ELGTPARI 32
           R+VSPL+ R  + K+       GLKQRP   L  P R+
Sbjct: 315 RLVSPLKNRKCVQKSDGLMMMSGLKQRPASSLVMPTRL 352


>emb|CBI36769.3| unnamed protein product [Vitis vinifera]
          Length = 352

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 37/88 (42%), Positives = 49/88 (55%), Gaps = 11/88 (12%)
 Frame = -3

Query: 286 PHKFLIKSPTASLGSQLATRKPGVAV------VRVLKASPEKVVVLKTRRRSFSPSKFVN 125
           PHKFLIKSP ++  SQ+  +   V++        + K S  KV      RRSFSPS+  N
Sbjct: 255 PHKFLIKSPPSASKSQVKIKNLPVSISPTRSTTALGKKSSPKVSAAVKFRRSFSPSRLAN 314

Query: 124 RMVSPLRTRIALPKTG-----IGLKQRP 56
           R+VSPL+ R  + K+       GLKQRP
Sbjct: 315 RLVSPLKNRKCVQKSDGLMMMSGLKQRP 342


>ref|XP_004495727.1| PREDICTED: uncharacterized protein LOC101502640 [Cicer arietinum]
          Length = 365

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 37/89 (41%), Positives = 52/89 (58%), Gaps = 9/89 (10%)
 Frame = -3

Query: 295 TPPPHKFLIKSPTASLGS---QLATRKPGVAVVRVL---KASPEKVVVLKTRRRSFSPSK 134
           T  PHKFLIKSP +       Q+ +    ++  R+    K SP++    K RR SFSPS+
Sbjct: 267 TVTPHKFLIKSPPSKNSKFQVQIKSTNVSISPTRLASFSKNSPKRSAASKFRR-SFSPSR 325

Query: 133 FVNRMVSPLRTRIALPKTGI---GLKQRP 56
             NR+VSPLR++ +  K+ +   GLKQRP
Sbjct: 326 LANRLVSPLRSKKSTQKSDVFVSGLKQRP 354


>ref|XP_006472116.1| PREDICTED: microtubule-binding protein TANGLED-like [Citrus
           sinensis]
          Length = 383

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 37/87 (42%), Positives = 48/87 (55%), Gaps = 10/87 (11%)
 Frame = -3

Query: 286 PHKFLIKSPTASLGSQLATRKPGVAV-------VRVLKASPEKVVVLKTRRRSFSPSKFV 128
           PHKFLIKSP ++   Q+  + P V           + K SP K+      RRSFSPS+  
Sbjct: 286 PHKFLIKSPPSASKFQVKIKSPPVISSLSPTRSTNLSKKSP-KLSTASKLRRSFSPSRLA 344

Query: 127 NRMVSPLRTRIALPKTG---IGLKQRP 56
           NR+VSPL++R  + K      GLKQRP
Sbjct: 345 NRLVSPLKSRKTVQKCDGQMSGLKQRP 371


>ref|XP_006433321.1| hypothetical protein CICLE_v10003680mg, partial [Citrus clementina]
            gi|557535443|gb|ESR46561.1| hypothetical protein
            CICLE_v10003680mg, partial [Citrus clementina]
          Length = 1110

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 37/87 (42%), Positives = 48/87 (55%), Gaps = 10/87 (11%)
 Frame = -3

Query: 286  PHKFLIKSPTASLGSQLATRKPGVAV-------VRVLKASPEKVVVLKTRRRSFSPSKFV 128
            PHKFLIKSP ++   Q+  + P V           + K SP K+      RRSFSPS+  
Sbjct: 1013 PHKFLIKSPPSASKFQVKIKSPPVISSLSPTRSTNLSKKSP-KLSTASKLRRSFSPSRLA 1071

Query: 127  NRMVSPLRTRIALPKTG---IGLKQRP 56
            NR+VSPL++R  + K      GLKQRP
Sbjct: 1072 NRLVSPLKSRKTVQKCDGQMSGLKQRP 1098


>ref|XP_002328563.1| predicted protein [Populus trichocarpa]
           gi|566169251|ref|XP_006382599.1| cyclin family protein
           [Populus trichocarpa] gi|550337962|gb|ERP60396.1| cyclin
           family protein [Populus trichocarpa]
          Length = 357

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 9/101 (8%)
 Frame = -3

Query: 310 SRPPQTPPPHKFLIKSPTASLGSQLATRKPGVAVV------RVLKASPEKVVVLKTRRRS 149
           +R  +   PHKFLIKSP +    Q+  + P V  +       + K SP+     K RR S
Sbjct: 253 ARNKKQTTPHKFLIKSPPSGSKFQVKIKNPPVLSLSPTRPTNLSKKSPKSSTASKFRR-S 311

Query: 148 FSPSKFVNRMVSPLRTRIALPKTGI---GLKQRPELGTPAR 35
           FSPS+  ++++SPL+ R  + K+ +   GLKQRP + TP R
Sbjct: 312 FSPSRLAHKLMSPLKGRKIVQKSDVLMSGLKQRP-IATPRR 351


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