BLASTX nr result

ID: Zingiber23_contig00043627 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00043627
         (347 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006849744.1| hypothetical protein AMTR_s00024p00249000 [A...    77   2e-12
ref|XP_002280664.2| PREDICTED: ATP-dependent DNA helicase recG-l...    76   4e-12
emb|CBI26906.3| unnamed protein product [Vitis vinifera]               76   4e-12
ref|XP_004953653.1| PREDICTED: uncharacterized protein LOC101769...    72   6e-11
gb|EOY00966.1| DEAD/DEAH box RNA helicase family protein isoform...    70   4e-10
gb|EOY00965.1| DEAD/DEAH box RNA helicase family protein isoform...    70   4e-10
gb|EEE57670.1| hypothetical protein OsJ_08114 [Oryza sativa Japo...    70   4e-10
gb|EEC73874.1| hypothetical protein OsI_08656 [Oryza sativa Indi...    70   4e-10
gb|EMJ28249.1| hypothetical protein PRUPE_ppa001035mg [Prunus pe...    69   8e-10
ref|XP_004298465.1| PREDICTED: ATP-dependent DNA helicase RecG-l...    65   9e-09
gb|EMT06587.1| ATP-dependent DNA helicase recG [Aegilops tauschii]     63   3e-08
ref|XP_002526020.1| conserved hypothetical protein [Ricinus comm...    63   3e-08
ref|XP_006344240.1| PREDICTED: uncharacterized protein LOC102583...    56   4e-06
ref|XP_004238835.1| PREDICTED: ATP-dependent DNA helicase RecG-l...    55   1e-05

>ref|XP_006849744.1| hypothetical protein AMTR_s00024p00249000 [Amborella trichopoda]
           gi|548853319|gb|ERN11325.1| hypothetical protein
           AMTR_s00024p00249000 [Amborella trichopoda]
          Length = 1027

 Score = 77.4 bits (189), Expect = 2e-12
 Identities = 39/94 (41%), Positives = 61/94 (64%), Gaps = 1/94 (1%)
 Frame = -3

Query: 342 YSTASTTERSQFLDKISVFMGYTDIKDLIEQEKNRQLTTVSMDDAFKEFDSTLICTKFPC 163
           Y T+S  +R+  L+K+SVFMGY  ++DL+E E+ R+ +   + +  K+FD ++ C  FP 
Sbjct: 70  YGTSSMFDRTDLLNKVSVFMGYNSVRDLMEHERARRESAADL-NLMKDFDMSVACKNFPS 128

Query: 162 IKVGNASSVGLYEEVPHAV-QVKLLGSDSCNEYL 64
           IK+G+AS V LY+E+     +V LL   +C EYL
Sbjct: 129 IKLGSASVVELYDEIARGPGKVDLLLPGTCKEYL 162


>ref|XP_002280664.2| PREDICTED: ATP-dependent DNA helicase recG-like [Vitis vinifera]
          Length = 1036

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 41/110 (37%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
 Frame = -3

Query: 345 NYSTASTTERSQFLDKISVFMGYTDIKDLIEQEKNRQLTTVSMDDAFKEFDSTLICTKFP 166
           +Y  AS ++RS+ L+K+SV MGY  + DLIE E+ ++ + +++ D     D +L C KFP
Sbjct: 102 SYGKASISDRSKLLNKVSVLMGYDSLHDLIENERVQKESDMNLKDEINNVDISLACRKFP 161

Query: 165 CIKVGNASSVGLYEEVP-HAVQVKLLGSDSCNEYLPIT-RPKWEELDKFA 22
            I +GN+  V LY+E   H+    LL +  C E+L  +   KW+  D+F+
Sbjct: 162 SIILGNSPPVELYDENKCHSDVRSLLAAQICEEFLSSSGAEKWDGPDRFS 211


>emb|CBI26906.3| unnamed protein product [Vitis vinifera]
          Length = 988

 Score = 76.3 bits (186), Expect = 4e-12
 Identities = 41/110 (37%), Positives = 66/110 (60%), Gaps = 2/110 (1%)
 Frame = -3

Query: 345 NYSTASTTERSQFLDKISVFMGYTDIKDLIEQEKNRQLTTVSMDDAFKEFDSTLICTKFP 166
           +Y  AS ++RS+ L+K+SV MGY  + DLIE E+ ++ + +++ D     D +L C KFP
Sbjct: 71  SYGKASISDRSKLLNKVSVLMGYDSLHDLIENERVQKESDMNLKDEINNVDISLACRKFP 130

Query: 165 CIKVGNASSVGLYEEVP-HAVQVKLLGSDSCNEYLPIT-RPKWEELDKFA 22
            I +GN+  V LY+E   H+    LL +  C E+L  +   KW+  D+F+
Sbjct: 131 SIILGNSPPVELYDENKCHSDVRSLLAAQICEEFLSSSGAEKWDGPDRFS 180


>ref|XP_004953653.1| PREDICTED: uncharacterized protein LOC101769520 [Setaria italica]
          Length = 980

 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 33/69 (47%), Positives = 48/69 (69%)
 Frame = -3

Query: 327 TTERSQFLDKISVFMGYTDIKDLIEQEKNRQLTTVSMDDAFKEFDSTLICTKFPCIKVGN 148
           T+ERS+ L K+SV MGY + +DL+EQ++ R+ +   +   FKE D   I  KFPCIK+G+
Sbjct: 70  TSERSKLLKKVSVLMGYINAQDLVEQQRARRESATELIGVFKEIDFPEISAKFPCIKIGD 129

Query: 147 ASSVGLYEE 121
           AS + LYE+
Sbjct: 130 ASPIELYED 138


>gb|EOY00966.1| DEAD/DEAH box RNA helicase family protein isoform 2, partial
           [Theobroma cacao]
          Length = 976

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 32/83 (38%), Positives = 53/83 (63%)
 Frame = -3

Query: 345 NYSTASTTERSQFLDKISVFMGYTDIKDLIEQEKNRQLTTVSMDDAFKEFDSTLICTKFP 166
           NY TAS  +RS+ L+K+SV MGY  + DLIE E+  +    ++ DA  +F+ +L C +FP
Sbjct: 71  NYDTASIVDRSKLLNKVSVLMGYNGLHDLIENERPDEQPDRNLKDATDDFELSLACKRFP 130

Query: 165 CIKVGNASSVGLYEEVPHAVQVK 97
            I +G++  V LY+E   + +++
Sbjct: 131 SITLGSSPPVELYDETTSSSRIR 153


>gb|EOY00965.1| DEAD/DEAH box RNA helicase family protein isoform 1 [Theobroma
           cacao]
          Length = 1029

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 32/83 (38%), Positives = 53/83 (63%)
 Frame = -3

Query: 345 NYSTASTTERSQFLDKISVFMGYTDIKDLIEQEKNRQLTTVSMDDAFKEFDSTLICTKFP 166
           NY TAS  +RS+ L+K+SV MGY  + DLIE E+  +    ++ DA  +F+ +L C +FP
Sbjct: 71  NYDTASIVDRSKLLNKVSVLMGYNGLHDLIENERPDEQPDRNLKDATDDFELSLACKRFP 130

Query: 165 CIKVGNASSVGLYEEVPHAVQVK 97
            I +G++  V LY+E   + +++
Sbjct: 131 SITLGSSPPVELYDETTSSSRIR 153


>gb|EEE57670.1| hypothetical protein OsJ_08114 [Oryza sativa Japonica Group]
          Length = 946

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 32/88 (36%), Positives = 56/88 (63%)
 Frame = -3

Query: 327 TTERSQFLDKISVFMGYTDIKDLIEQEKNRQLTTVSMDDAFKEFDSTLICTKFPCIKVGN 148
           T+ERS+ L+K+SV MGY++ ++LIEQE+ R+ +   +    KE +   +C KFPCIK+G+
Sbjct: 32  TSERSKLLNKVSVLMGYSNTQELIEQERARRGSATELISVCKEIEFPEMCAKFPCIKIGD 91

Query: 147 ASSVGLYEEVPHAVQVKLLGSDSCNEYL 64
           +S + LY       Q + + S++   ++
Sbjct: 92  SSPIELYAAAASMSQKETVLSENLTNFM 119


>gb|EEC73874.1| hypothetical protein OsI_08656 [Oryza sativa Indica Group]
          Length = 253

 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 32/88 (36%), Positives = 56/88 (63%)
 Frame = -3

Query: 327 TTERSQFLDKISVFMGYTDIKDLIEQEKNRQLTTVSMDDAFKEFDSTLICTKFPCIKVGN 148
           T+ERS+ L+K+SV MGY++ ++LIEQE+ R+ +   +    KE +   +C KFPCIK+G+
Sbjct: 32  TSERSKLLNKVSVLMGYSNTQELIEQERARRGSATELISVCKEIEFPEMCAKFPCIKIGD 91

Query: 147 ASSVGLYEEVPHAVQVKLLGSDSCNEYL 64
           +S + LY       Q + + S++   ++
Sbjct: 92  SSPIELYAAAASMSQKETVLSENLTNFM 119


>gb|EMJ28249.1| hypothetical protein PRUPE_ppa001035mg [Prunus persica]
          Length = 927

 Score = 68.6 bits (166), Expect = 8e-10
 Identities = 35/97 (36%), Positives = 57/97 (58%)
 Frame = -3

Query: 345 NYSTASTTERSQFLDKISVFMGYTDIKDLIEQEKNRQLTTVSMDDAFKEFDSTLICTKFP 166
           +Y  AS ++RS+ L+K+SV MGY  + +LIE E+  + + + + DA  EFD +L C +FP
Sbjct: 68  SYGIASISDRSKLLNKVSVLMGYDSLHNLIENERAEKQSGMYVKDAVDEFDVSLACRRFP 127

Query: 165 CIKVGNASSVGLYEEVPHAVQVKLLGSDSCNEYLPIT 55
            I + ++  V LY+      +  LL + SC  +L  T
Sbjct: 128 SIILSSSPRVELYDGTTSFTERMLLETQSCEGFLSDT 164


>ref|XP_004298465.1| PREDICTED: ATP-dependent DNA helicase RecG-like [Fragaria vesca
           subsp. vesca]
          Length = 989

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 29/74 (39%), Positives = 49/74 (66%)
 Frame = -3

Query: 345 NYSTASTTERSQFLDKISVFMGYTDIKDLIEQEKNRQLTTVSMDDAFKEFDSTLICTKFP 166
           +Y  AS ++RS+ L+K+SV MGY  + DLIE E+  +   +++ DA  +FD + +C +FP
Sbjct: 67  SYGIASVSDRSKLLNKVSVLMGYDGLHDLIENERAEKHYGMNIKDAMDDFDVSFVCQRFP 126

Query: 165 CIKVGNASSVGLYE 124
            I +G++  V LY+
Sbjct: 127 SIILGSSPQVELYD 140


>gb|EMT06587.1| ATP-dependent DNA helicase recG [Aegilops tauschii]
          Length = 841

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 28/68 (41%), Positives = 47/68 (69%)
 Frame = -3

Query: 324 TERSQFLDKISVFMGYTDIKDLIEQEKNRQLTTVSMDDAFKEFDSTLICTKFPCIKVGNA 145
           +ERS+ L+K+ V MGY++ + L+EQE+ R+ ++  +    KE D   I  KFPCIK+G++
Sbjct: 33  SERSKLLNKVPVLMGYSNTQYLMEQERVRKESSTELISVLKEIDFAEISAKFPCIKIGDS 92

Query: 144 SSVGLYEE 121
           S + LY++
Sbjct: 93  SPIELYDD 100


>ref|XP_002526020.1| conserved hypothetical protein [Ricinus communis]
           gi|223534667|gb|EEF36360.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 983

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 2/108 (1%)
 Frame = -3

Query: 342 YSTASTTERSQFLDKISVFMGYTDIKDLIEQEKNRQLTTVSMDDAFKEFDSTLICTKFPC 163
           Y   S ++RS+ L+K++  + Y    DLIE  K  + +   + DA  +FD +L C +FP 
Sbjct: 32  YDMPSVSDRSKLLNKVTALVDYDGFHDLIENGKAGEQSGQDLKDATDDFDVSLACKRFPS 91

Query: 162 IKVGNASSVGLYEEVPHAVQVK-LLGSDSCNEYL-PITRPKWEELDKF 25
           I +G++  V LY+E    +++K LL ++S  E++      KW + D F
Sbjct: 92  ITLGSSPPVELYDETTKPLEMKTLLAAESYKEFVSDALGMKWVDSDGF 139


>ref|XP_006344240.1| PREDICTED: uncharacterized protein LOC102583700 [Solanum tuberosum]
          Length = 1001

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 26/73 (35%), Positives = 45/73 (61%)
 Frame = -3

Query: 342 YSTASTTERSQFLDKISVFMGYTDIKDLIEQEKNRQLTTVSMDDAFKEFDSTLICTKFPC 163
           Y  AS  +RS+FL+K SV MGY  + DL++   + + + +  D    +FD +L+C +F  
Sbjct: 73  YGCASVKDRSKFLNKASVVMGYDGLDDLLDGNGSEKQSDIHPDGGAVDFDFSLMCKQFSS 132

Query: 162 IKVGNASSVGLYE 124
           I++G++  V LY+
Sbjct: 133 IRLGSSPPVELYD 145


>ref|XP_004238835.1| PREDICTED: ATP-dependent DNA helicase RecG-like [Solanum
           lycopersicum]
          Length = 1001

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 26/73 (35%), Positives = 43/73 (58%)
 Frame = -3

Query: 342 YSTASTTERSQFLDKISVFMGYTDIKDLIEQEKNRQLTTVSMDDAFKEFDSTLICTKFPC 163
           Y  AS  +RS+F +K SV MGY  + DLI+     + + +  D    +FD +L+C +F  
Sbjct: 73  YGCASVKDRSKFFNKASVVMGYDGLDDLIDANGTEKQSDIHPDGGAIDFDFSLMCKQFSS 132

Query: 162 IKVGNASSVGLYE 124
           I++G++  V LY+
Sbjct: 133 IRLGSSPPVELYD 145


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