BLASTX nr result

ID: Zingiber23_contig00043625 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00043625
         (260 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004504707.1| PREDICTED: probable WRKY transcription facto...    56   4e-06
ref|NP_001266266.1| probable WRKY transcription factor 71-like [...    56   4e-06
ref|XP_003566905.1| PREDICTED: probable WRKY transcription facto...    56   4e-06
ref|XP_003617423.1| WRKY transcription factor [Medicago truncatu...    56   4e-06
gb|ABF69964.1| DNA-binding WRKY domain-containing protein [Musa ...    56   4e-06
ref|NP_001147623.1| WRKY11 - superfamily of TFs having WRKY and ...    55   8e-06

>ref|XP_004504707.1| PREDICTED: probable WRKY transcription factor 28-like [Cicer
           arietinum]
          Length = 332

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 28/51 (54%), Positives = 35/51 (68%)
 Frame = +3

Query: 3   KKRVERSHEDPMTVVTTYEGKHNHYSTSNFHGGNCIDLLMSPPSSLTNMPT 155
           KKRVERS EDP TV+TTYEG+HNH   ++   GN    +M  PSSL + P+
Sbjct: 215 KKRVERSFEDPTTVITTYEGQHNHPVPTSLR-GNAAAAIMFTPSSLLSTPS 264


>ref|NP_001266266.1| probable WRKY transcription factor 71-like [Solanum lycopersicum]
           gi|439967324|gb|AGB76028.1| WRKY16 protein [Solanum
           lycopersicum]
          Length = 322

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
 Frame = +3

Query: 3   KKRVERSHEDPMTVVTTYEGKHNHYSTSNFHGGNCIDLLMSPPSSLTNMPTMFLN---HQ 173
           KKRVERS+EDP  V+TTYEG+HNH+  +    GN    L+SP    +    ++ N    Q
Sbjct: 217 KKRVERSYEDPSIVITTYEGQHNHHCPATLR-GNAAAALLSPSFLSSTQQQLYHNPNEQQ 275

Query: 174 VVASPMKPSTCSYVDDLPPPQNLQVVHDY 260
           +  +P  P   S+ ++    Q  Q+  DY
Sbjct: 276 IFYNPNIPINNSFYNNNYHQQQPQLGPDY 304


>ref|XP_003566905.1| PREDICTED: probable WRKY transcription factor 28-like [Brachypodium
           distachyon]
          Length = 342

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 33/81 (40%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
 Frame = +3

Query: 3   KKRVERSHEDPMTVVTTYEGKHNHYSTSNFHGGNCIDLLMSPPSSLTNM-PTMFLNH--Q 173
           KKRVERS++DP TV+TTYEG+H H+S ++   G+   L M PP  L  M P +F      
Sbjct: 229 KKRVERSYQDPSTVITTYEGQHTHHSPASLR-GSAAHLFMPPPQHLGLMAPPLFRTDLMS 287

Query: 174 VVASPMKPSTCSYV-DDLPPP 233
           ++     P+   Y+   +PPP
Sbjct: 288 MMQHMQYPNPNMYMPTSIPPP 308


>ref|XP_003617423.1| WRKY transcription factor [Medicago truncatula]
           gi|355518758|gb|AET00382.1| WRKY transcription factor
           [Medicago truncatula]
          Length = 310

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 37/87 (42%), Positives = 45/87 (51%), Gaps = 3/87 (3%)
 Frame = +3

Query: 3   KKRVERSHEDPMTVVTTYEGKHNHYSTSNFHGGNCIDLLMSPPSSLTNMPTMFLN---HQ 173
           KKRVERS++DP  V+TTYEG+HNH+  +   G     LL S PS   +  +M L    HQ
Sbjct: 190 KKRVERSYQDPSIVMTTYEGQHNHHCPATLRGNASSMLLSSSPSLFASSTSMGLEQRLHQ 249

Query: 174 VVASPMKPSTCSYVDDLPPPQNLQVVH 254
              S   P T S  D     QNL   H
Sbjct: 250 DFFSQFLP-TYSQSDQQIFHQNLPQPH 275


>gb|ABF69964.1| DNA-binding WRKY domain-containing protein [Musa acuminata]
          Length = 306

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 36/81 (44%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
 Frame = +3

Query: 3   KKRVERSHEDPMTVVTTYEGKHNHYSTSNFHGGNCIDLLMSPPSSLTNMPTMFLNHQVVA 182
           KKRVERS +DP TV+TTYEG+H H+S ++  GG    +L   PS  TN+    L  QV  
Sbjct: 204 KKRVERSCQDPTTVITTYEGQHTHHSPASLRGGGGGHML--SPSPTTNLRRSLLLQQVSR 261

Query: 183 SP-----MKPSTCSYVDDLPP 230
           S        P+T  Y   LPP
Sbjct: 262 SSSSAGYTNPNT--YHAGLPP 280


>ref|NP_001147623.1| WRKY11 - superfamily of TFs having WRKY and zinc finger domains
           [Zea mays] gi|194700780|gb|ACF84474.1| unknown [Zea
           mays] gi|195612626|gb|ACG28143.1| WRKY11 - superfamily
           of TFs having WRKY and zinc finger domains [Zea mays]
           gi|414881357|tpg|DAA58488.1| TPA: putative WRKY
           DNA-binding domain superfamily protein [Zea mays]
          Length = 352

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 9/89 (10%)
 Frame = +3

Query: 3   KKRVERSHEDPMTVVTTYEGKHNHYSTSNFHGGNCIDLLMSP----PSSLTNMPTMFLNH 170
           KKRVERS++DP TV+TTYEG+H H+S ++   G    L MS     P  LT   + F   
Sbjct: 231 KKRVERSYQDPSTVITTYEGQHTHHSPASLRAGGA-HLFMSSAHALPPHLTMPSSSFRPD 289

Query: 171 QVVASPMKPSTCS-----YVDDLPPPQNL 242
             + S M P+        ++  +PPP ++
Sbjct: 290 LNLMSMMHPAMVGANPNMFLPSMPPPPHM 318


Top