BLASTX nr result
ID: Zingiber23_contig00043457
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00043457
(319 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280748.1| PREDICTED: DNA repair protein RAD51 homolog ... 139 5e-31
gb|EXB76229.1| DNA repair protein RAD51-3-like protein [Morus no... 137 1e-30
ref|XP_004969429.1| PREDICTED: DNA repair protein RAD51 homolog ... 134 2e-29
ref|XP_003569252.1| PREDICTED: DNA repair protein RAD51 homolog ... 130 2e-28
ref|XP_006644306.1| PREDICTED: DNA repair protein RAD51 homolog ... 129 4e-28
ref|XP_006644305.1| PREDICTED: DNA repair protein RAD51 homolog ... 129 4e-28
ref|XP_004506531.1| PREDICTED: DNA repair protein RAD51 homolog ... 129 4e-28
ref|XP_003609084.1| DNA repair protein RAD51-like protein [Medic... 129 4e-28
ref|XP_006857819.1| hypothetical protein AMTR_s00069p00024300 [A... 129 5e-28
gb|EMJ21604.1| hypothetical protein PRUPE_ppa007713mg [Prunus pe... 129 5e-28
ref|XP_004240049.1| PREDICTED: DNA repair protein RAD51 homolog ... 128 7e-28
ref|XP_003605159.1| DNA repair protein RAD51-like protein [Medic... 128 9e-28
gb|EEC70945.1| hypothetical protein OsI_02540 [Oryza sativa Indi... 127 1e-27
ref|XP_006295175.1| hypothetical protein CARUB_v10024254mg [Caps... 126 3e-27
ref|XP_006345516.1| PREDICTED: DNA repair protein RAD51 homolog ... 126 3e-27
ref|NP_001043394.1| Os01g0578000 [Oryza sativa Japonica Group] g... 126 3e-27
ref|XP_002511689.1| DNA repair and recombination protein radA, p... 126 3e-27
gb|EEE54857.1| hypothetical protein OsJ_02328 [Oryza sativa Japo... 126 3e-27
gb|ESW06853.1| hypothetical protein PHAVU_010G082100g [Phaseolus... 125 4e-27
ref|XP_004306934.1| PREDICTED: DNA repair protein RAD51 homolog ... 125 7e-27
>ref|XP_002280748.1| PREDICTED: DNA repair protein RAD51 homolog 3 [Vitis vinifera]
gi|296089196|emb|CBI38899.3| unnamed protein product
[Vitis vinifera]
Length = 346
Score = 139 bits (349), Expect = 5e-31
Identities = 65/83 (78%), Positives = 74/83 (89%)
Frame = -1
Query: 250 GAHALLDGAQTAWDMLSEEQMQKPITTGCEELDTILGGGIQCKAVTEIGGIPGIGKTQLG 71
G+HA+++GAQTAWDML EE+ K ITT C +LD ILGGGI+CK VTEIGG+PGIGKTQLG
Sbjct: 64 GSHAIVNGAQTAWDMLHEEESLKCITTSCVDLDDILGGGIKCKEVTEIGGVPGIGKTQLG 123
Query: 70 IQLAVNVQIPVQYGGLGGKAVYI 2
IQLAVNVQIPV YGGLGGKA+YI
Sbjct: 124 IQLAVNVQIPVNYGGLGGKAIYI 146
>gb|EXB76229.1| DNA repair protein RAD51-3-like protein [Morus notabilis]
Length = 346
Score = 137 bits (346), Expect = 1e-30
Identities = 67/94 (71%), Positives = 74/94 (78%)
Frame = -1
Query: 283 ASIAMAESSRSGAHALLDGAQTAWDMLSEEQMQKPITTGCEELDTILGGGIQCKAVTEIG 104
AS+ G HA+ +GAQTAWDML EEQ+ + ITT C +LD ILGGGI CK VTEIG
Sbjct: 53 ASLNSRLDRTDGGHAIFNGAQTAWDMLHEEQLLRRITTSCADLDNILGGGINCKEVTEIG 112
Query: 103 GIPGIGKTQLGIQLAVNVQIPVQYGGLGGKAVYI 2
G+PGIGKTQLGIQLAVNVQIPV GGLGGKAVYI
Sbjct: 113 GVPGIGKTQLGIQLAVNVQIPVDLGGLGGKAVYI 146
>ref|XP_004969429.1| PREDICTED: DNA repair protein RAD51 homolog 3-like [Setaria
italica]
Length = 288
Score = 134 bits (336), Expect = 2e-29
Identities = 65/86 (75%), Positives = 73/86 (84%)
Frame = -1
Query: 259 SRSGAHALLDGAQTAWDMLSEEQMQKPITTGCEELDTILGGGIQCKAVTEIGGIPGIGKT 80
S SG +L GAQ AWDMLS+EQ QK ITTG +L+ ILGGGI CK VTEIGG+PG+GKT
Sbjct: 2 SSSGNPPILAGAQNAWDMLSDEQSQKHITTGSGDLNHILGGGIHCKEVTEIGGVPGVGKT 61
Query: 79 QLGIQLAVNVQIPVQYGGLGGKAVYI 2
QLGIQLA+NVQIPV+YGGLGGKAVYI
Sbjct: 62 QLGIQLAINVQIPVEYGGLGGKAVYI 87
>ref|XP_003569252.1| PREDICTED: DNA repair protein RAD51 homolog 3-like [Brachypodium
distachyon]
Length = 309
Score = 130 bits (327), Expect = 2e-28
Identities = 61/79 (77%), Positives = 71/79 (89%)
Frame = -1
Query: 238 LLDGAQTAWDMLSEEQMQKPITTGCEELDTILGGGIQCKAVTEIGGIPGIGKTQLGIQLA 59
+L GAQ AWD+LS+EQ QK ITTG +L++ILGGGI CK VTEIGG+PG+GKTQLGIQLA
Sbjct: 30 VLRGAQNAWDLLSDEQSQKHITTGSGDLNSILGGGIHCKEVTEIGGVPGVGKTQLGIQLA 89
Query: 58 VNVQIPVQYGGLGGKAVYI 2
+NVQIPV+YGGLGGKAVYI
Sbjct: 90 INVQIPVEYGGLGGKAVYI 108
>ref|XP_006644306.1| PREDICTED: DNA repair protein RAD51 homolog 3-like isoform X2
[Oryza brachyantha]
Length = 263
Score = 129 bits (324), Expect = 4e-28
Identities = 61/82 (74%), Positives = 71/82 (86%)
Frame = -1
Query: 247 AHALLDGAQTAWDMLSEEQMQKPITTGCEELDTILGGGIQCKAVTEIGGIPGIGKTQLGI 68
A ++L GAQ AWDMLS+EQ +K I TG +L+ ILGGGI CK VTEIGG+PGIGKTQLGI
Sbjct: 27 ASSVLKGAQNAWDMLSDEQSRKHINTGSADLNNILGGGIHCKEVTEIGGVPGIGKTQLGI 86
Query: 67 QLAVNVQIPVQYGGLGGKAVYI 2
QLA+NVQIP++YGGLGGKAVYI
Sbjct: 87 QLAINVQIPLEYGGLGGKAVYI 108
>ref|XP_006644305.1| PREDICTED: DNA repair protein RAD51 homolog 3-like isoform X1
[Oryza brachyantha]
Length = 309
Score = 129 bits (324), Expect = 4e-28
Identities = 61/82 (74%), Positives = 71/82 (86%)
Frame = -1
Query: 247 AHALLDGAQTAWDMLSEEQMQKPITTGCEELDTILGGGIQCKAVTEIGGIPGIGKTQLGI 68
A ++L GAQ AWDMLS+EQ +K I TG +L+ ILGGGI CK VTEIGG+PGIGKTQLGI
Sbjct: 27 ASSVLKGAQNAWDMLSDEQSRKHINTGSADLNNILGGGIHCKEVTEIGGVPGIGKTQLGI 86
Query: 67 QLAVNVQIPVQYGGLGGKAVYI 2
QLA+NVQIP++YGGLGGKAVYI
Sbjct: 87 QLAINVQIPLEYGGLGGKAVYI 108
>ref|XP_004506531.1| PREDICTED: DNA repair protein RAD51 homolog 3-like isoform X1
[Cicer arietinum] gi|502146618|ref|XP_004506532.1|
PREDICTED: DNA repair protein RAD51 homolog 3-like
isoform X2 [Cicer arietinum]
gi|502146620|ref|XP_004506533.1| PREDICTED: DNA repair
protein RAD51 homolog 3-like isoform X3 [Cicer
arietinum]
Length = 347
Score = 129 bits (324), Expect = 4e-28
Identities = 58/79 (73%), Positives = 68/79 (86%)
Frame = -1
Query: 238 LLDGAQTAWDMLSEEQMQKPITTGCEELDTILGGGIQCKAVTEIGGIPGIGKTQLGIQLA 59
++DG QTAWDM +EE+ ITT C +LD ILGGGI CK VTEIGG+PGIGKTQ+GIQLA
Sbjct: 69 IIDGGQTAWDMFNEERFSSLITTSCVDLDNILGGGINCKEVTEIGGVPGIGKTQIGIQLA 128
Query: 58 VNVQIPVQYGGLGGKAVYI 2
VNVQIP++YGGLGGKA+YI
Sbjct: 129 VNVQIPLEYGGLGGKAIYI 147
>ref|XP_003609084.1| DNA repair protein RAD51-like protein [Medicago truncatula]
gi|357477663|ref|XP_003609117.1| DNA repair protein
RAD51-like protein [Medicago truncatula]
gi|355510139|gb|AES91281.1| DNA repair protein
RAD51-like protein [Medicago truncatula]
gi|355510172|gb|AES91314.1| DNA repair protein
RAD51-like protein [Medicago truncatula]
Length = 347
Score = 129 bits (324), Expect = 4e-28
Identities = 59/79 (74%), Positives = 68/79 (86%)
Frame = -1
Query: 238 LLDGAQTAWDMLSEEQMQKPITTGCEELDTILGGGIQCKAVTEIGGIPGIGKTQLGIQLA 59
++DG QTAWDML+EE+ ITT C +LD ILGGGI CK VTEIGG+PGIGKTQ+GIQLA
Sbjct: 69 VIDGGQTAWDMLNEERFSSLITTSCLDLDNILGGGINCKEVTEIGGVPGIGKTQIGIQLA 128
Query: 58 VNVQIPVQYGGLGGKAVYI 2
VNVQIP+ YGGLGGKA+YI
Sbjct: 129 VNVQIPLDYGGLGGKAIYI 147
>ref|XP_006857819.1| hypothetical protein AMTR_s00069p00024300 [Amborella trichopoda]
gi|548861921|gb|ERN19286.1| hypothetical protein
AMTR_s00069p00024300 [Amborella trichopoda]
Length = 342
Score = 129 bits (323), Expect = 5e-28
Identities = 61/101 (60%), Positives = 78/101 (77%), Gaps = 4/101 (3%)
Frame = -1
Query: 292 PMSASIAMAESSRSGA----HALLDGAQTAWDMLSEEQMQKPITTGCEELDTILGGGIQC 125
P AS + +++G +++ GAQTAWD+L E++ ITT CE+LD ILGGGI C
Sbjct: 43 PQEASDVLRVVTQAGMMRKPDSIVAGAQTAWDILCEDRTMNHITTSCEDLDGILGGGISC 102
Query: 124 KAVTEIGGIPGIGKTQLGIQLAVNVQIPVQYGGLGGKAVYI 2
K +TE+GG+PGIGKTQLGIQLAVNVQIPV+YGGLGGKA+Y+
Sbjct: 103 KEITEVGGVPGIGKTQLGIQLAVNVQIPVEYGGLGGKAIYV 143
>gb|EMJ21604.1| hypothetical protein PRUPE_ppa007713mg [Prunus persica]
Length = 358
Score = 129 bits (323), Expect = 5e-28
Identities = 61/82 (74%), Positives = 69/82 (84%)
Frame = -1
Query: 247 AHALLDGAQTAWDMLSEEQMQKPITTGCEELDTILGGGIQCKAVTEIGGIPGIGKTQLGI 68
++ + GAQTAW+ML EEQ+ ITT C +LD ILGGGI CK VTEIGG+PGIGKTQLGI
Sbjct: 65 SNGIFTGAQTAWEMLHEEQLFPRITTSCADLDNILGGGINCKEVTEIGGVPGIGKTQLGI 124
Query: 67 QLAVNVQIPVQYGGLGGKAVYI 2
QLAVNVQIPV +GGLGGKAVYI
Sbjct: 125 QLAVNVQIPVDFGGLGGKAVYI 146
>ref|XP_004240049.1| PREDICTED: DNA repair protein RAD51 homolog 3-like [Solanum
lycopersicum]
Length = 346
Score = 128 bits (322), Expect = 7e-28
Identities = 62/94 (65%), Positives = 74/94 (78%)
Frame = -1
Query: 283 ASIAMAESSRSGAHALLDGAQTAWDMLSEEQMQKPITTGCEELDTILGGGIQCKAVTEIG 104
AS +G ++++GAQ+AW+ML+EE++ ITT C ELD ILGGGI CK VTEIG
Sbjct: 53 ASRRRGSERSNGTSSIVNGAQSAWEMLNEEKLLGRITTSCSELDDILGGGISCKEVTEIG 112
Query: 103 GIPGIGKTQLGIQLAVNVQIPVQYGGLGGKAVYI 2
G+PGIGKTQLGIQLAVNVQIP+ YGGL GKAVYI
Sbjct: 113 GVPGIGKTQLGIQLAVNVQIPMDYGGLQGKAVYI 146
>ref|XP_003605159.1| DNA repair protein RAD51-like protein [Medicago truncatula]
gi|355506214|gb|AES87356.1| DNA repair protein
RAD51-like protein [Medicago truncatula]
Length = 347
Score = 128 bits (321), Expect = 9e-28
Identities = 61/85 (71%), Positives = 72/85 (84%), Gaps = 1/85 (1%)
Frame = -1
Query: 253 SGAHA-LLDGAQTAWDMLSEEQMQKPITTGCEELDTILGGGIQCKAVTEIGGIPGIGKTQ 77
SG++A ++ G QTAWDML+EE+ ITT C +LD ILGGGI CK VTEIGG+PGIGKTQ
Sbjct: 63 SGSNANVIHGGQTAWDMLNEERFSSLITTSCLDLDNILGGGINCKEVTEIGGVPGIGKTQ 122
Query: 76 LGIQLAVNVQIPVQYGGLGGKAVYI 2
+GIQLAVNVQIP+ YGGLGGKA+YI
Sbjct: 123 IGIQLAVNVQIPLDYGGLGGKAIYI 147
>gb|EEC70945.1| hypothetical protein OsI_02540 [Oryza sativa Indica Group]
Length = 349
Score = 127 bits (320), Expect = 1e-27
Identities = 59/80 (73%), Positives = 70/80 (87%)
Frame = -1
Query: 241 ALLDGAQTAWDMLSEEQMQKPITTGCEELDTILGGGIQCKAVTEIGGIPGIGKTQLGIQL 62
++L GAQ AWDMLS+EQ ++ I TG +L+ ILGGGI CK VTEIGG+PG+GKTQLGIQL
Sbjct: 69 SVLKGAQNAWDMLSDEQSRRHINTGSADLNNILGGGIHCKEVTEIGGVPGVGKTQLGIQL 128
Query: 61 AVNVQIPVQYGGLGGKAVYI 2
A+NVQIPV+YGGLGGKAVYI
Sbjct: 129 AINVQIPVEYGGLGGKAVYI 148
>ref|XP_006295175.1| hypothetical protein CARUB_v10024254mg [Capsella rubella]
gi|482563883|gb|EOA28073.1| hypothetical protein
CARUB_v10024254mg [Capsella rubella]
Length = 150
Score = 126 bits (317), Expect = 3e-27
Identities = 58/94 (61%), Positives = 76/94 (80%)
Frame = -1
Query: 283 ASIAMAESSRSGAHALLDGAQTAWDMLSEEQMQKPITTGCEELDTILGGGIQCKAVTEIG 104
A+ + SS +G+ +L++GA+ AWDML EE+ ITT C +LD ILGGGI C+ VTEIG
Sbjct: 53 ANQSSGSSSCNGSRSLINGAKNAWDMLHEEESLPRITTSCSDLDNILGGGISCRDVTEIG 112
Query: 103 GIPGIGKTQLGIQLAVNVQIPVQYGGLGGKAVYI 2
G+PGIGKTQ+GIQ++VNVQIP ++GGLGGKA+YI
Sbjct: 113 GVPGIGKTQIGIQISVNVQIPREFGGLGGKAIYI 146
>ref|XP_006345516.1| PREDICTED: DNA repair protein RAD51 homolog 3-like [Solanum
tuberosum]
Length = 346
Score = 126 bits (316), Expect = 3e-27
Identities = 61/94 (64%), Positives = 73/94 (77%)
Frame = -1
Query: 283 ASIAMAESSRSGAHALLDGAQTAWDMLSEEQMQKPITTGCEELDTILGGGIQCKAVTEIG 104
AS +G ++++GAQ+AW+ML+EE+ ITT C ELD ILGGGI C+ VTEIG
Sbjct: 53 ASQRRGSERSNGTSSIVNGAQSAWEMLNEEKSLGRITTSCSELDDILGGGISCREVTEIG 112
Query: 103 GIPGIGKTQLGIQLAVNVQIPVQYGGLGGKAVYI 2
G+PGIGKTQLGIQLAVNVQIP+ YGGL GKAVYI
Sbjct: 113 GVPGIGKTQLGIQLAVNVQIPMDYGGLQGKAVYI 146
>ref|NP_001043394.1| Os01g0578000 [Oryza sativa Japonica Group]
gi|13161340|dbj|BAB32931.1| DNA repair protein radA
(radA)-like [Oryza sativa Japonica Group]
gi|20521295|dbj|BAB91810.1| DNA repair protein radA
(radA)-like [Oryza sativa Japonica Group]
gi|113532925|dbj|BAF05308.1| Os01g0578000 [Oryza sativa
Japonica Group] gi|215686387|dbj|BAG87648.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|343466352|gb|AEM43048.1| RAD51C-1 [Oryza sativa]
Length = 349
Score = 126 bits (316), Expect = 3e-27
Identities = 58/80 (72%), Positives = 69/80 (86%)
Frame = -1
Query: 241 ALLDGAQTAWDMLSEEQMQKPITTGCEELDTILGGGIQCKAVTEIGGIPGIGKTQLGIQL 62
++L G Q AWDMLS+EQ ++ I TG +L+ ILGGGI CK VTEIGG+PG+GKTQLGIQL
Sbjct: 69 SVLKGVQNAWDMLSDEQSRRHINTGSADLNNILGGGIHCKEVTEIGGVPGVGKTQLGIQL 128
Query: 61 AVNVQIPVQYGGLGGKAVYI 2
A+NVQIPV+YGGLGGKAVYI
Sbjct: 129 AINVQIPVEYGGLGGKAVYI 148
>ref|XP_002511689.1| DNA repair and recombination protein radA, putative [Ricinus
communis] gi|223548869|gb|EEF50358.1| DNA repair and
recombination protein radA, putative [Ricinus communis]
Length = 346
Score = 126 bits (316), Expect = 3e-27
Identities = 61/83 (73%), Positives = 67/83 (80%)
Frame = -1
Query: 250 GAHALLDGAQTAWDMLSEEQMQKPITTGCEELDTILGGGIQCKAVTEIGGIPGIGKTQLG 71
G HA+++GAQ AW+ML EE ITT C +LD ILGGGI CK VTEIGG+PGIGKTQLG
Sbjct: 64 GCHAVINGAQNAWEMLHEESSLTRITTSCADLDNILGGGITCKEVTEIGGLPGIGKTQLG 123
Query: 70 IQLAVNVQIPVQYGGLGGKAVYI 2
IQLAVNVQIP GGLGGKAVYI
Sbjct: 124 IQLAVNVQIPPYCGGLGGKAVYI 146
>gb|EEE54857.1| hypothetical protein OsJ_02328 [Oryza sativa Japonica Group]
Length = 349
Score = 126 bits (316), Expect = 3e-27
Identities = 58/80 (72%), Positives = 69/80 (86%)
Frame = -1
Query: 241 ALLDGAQTAWDMLSEEQMQKPITTGCEELDTILGGGIQCKAVTEIGGIPGIGKTQLGIQL 62
++L G Q AWDMLS+EQ ++ I TG +L+ ILGGGI CK VTEIGG+PG+GKTQLGIQL
Sbjct: 69 SVLKGVQNAWDMLSDEQSRRHINTGSADLNNILGGGIHCKEVTEIGGVPGVGKTQLGIQL 128
Query: 61 AVNVQIPVQYGGLGGKAVYI 2
A+NVQIPV+YGGLGGKAVYI
Sbjct: 129 AINVQIPVEYGGLGGKAVYI 148
>gb|ESW06853.1| hypothetical protein PHAVU_010G082100g [Phaseolus vulgaris]
Length = 347
Score = 125 bits (315), Expect = 4e-27
Identities = 62/95 (65%), Positives = 75/95 (78%), Gaps = 1/95 (1%)
Frame = -1
Query: 283 ASIAMAESSRSGAHA-LLDGAQTAWDMLSEEQMQKPITTGCEELDTILGGGIQCKAVTEI 107
A+ A A + +G H ++ G QTAWDML++E+ ITT C +LD ILGGGI+CK VTEI
Sbjct: 53 AAKAGALETPNGTHTTVVGGGQTAWDMLNDEKFSSYITTSCVDLDNILGGGIKCKDVTEI 112
Query: 106 GGIPGIGKTQLGIQLAVNVQIPVQYGGLGGKAVYI 2
GG+PGIGKTQ+GIQLAVNVQIP YGGLGGKA+YI
Sbjct: 113 GGVPGIGKTQIGIQLAVNVQIPQGYGGLGGKAIYI 147
>ref|XP_004306934.1| PREDICTED: DNA repair protein RAD51 homolog 3-like [Fragaria vesca
subsp. vesca]
Length = 346
Score = 125 bits (313), Expect = 7e-27
Identities = 59/80 (73%), Positives = 69/80 (86%)
Frame = -1
Query: 241 ALLDGAQTAWDMLSEEQMQKPITTGCEELDTILGGGIQCKAVTEIGGIPGIGKTQLGIQL 62
AL++G QTAW++L+EE++ ITT C +LD ILGGGI CK VTEIGG+PGIGKTQLGIQL
Sbjct: 67 ALVNGGQTAWEILNEEKLLPRITTSCADLDYILGGGINCKEVTEIGGVPGIGKTQLGIQL 126
Query: 61 AVNVQIPVQYGGLGGKAVYI 2
AVNVQ P+ YGGLGGKAVYI
Sbjct: 127 AVNVQRPIGYGGLGGKAVYI 146