BLASTX nr result
ID: Zingiber23_contig00043424
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00043424
(233 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004305061.1| PREDICTED: mediator of RNA polymerase II tra... 152 4e-35
ref|XP_002323105.2| hypothetical protein POPTR_0016s14910g [Popu... 150 2e-34
gb|EXC35212.1| hypothetical protein L484_022767 [Morus notabilis] 149 5e-34
tpg|DAA41777.1| TPA: hypothetical protein ZEAMMB73_504046 [Zea m... 147 2e-33
ref|XP_002519971.1| conserved hypothetical protein [Ricinus comm... 147 2e-33
ref|XP_004962479.1| PREDICTED: mediator of RNA polymerase II tra... 145 5e-33
ref|XP_004962478.1| PREDICTED: mediator of RNA polymerase II tra... 145 5e-33
ref|XP_004962477.1| PREDICTED: mediator of RNA polymerase II tra... 145 5e-33
ref|XP_004962476.1| PREDICTED: mediator of RNA polymerase II tra... 145 5e-33
ref|XP_004962475.1| PREDICTED: mediator of RNA polymerase II tra... 145 5e-33
ref|XP_004959895.1| PREDICTED: mediator of RNA polymerase II tra... 144 9e-33
ref|XP_002461223.1| hypothetical protein SORBIDRAFT_02g043150 [S... 144 9e-33
ref|XP_006429661.1| hypothetical protein CICLE_v10010920mg [Citr... 144 1e-32
ref|XP_006842623.1| hypothetical protein AMTR_s00077p00181380 [A... 143 2e-32
ref|XP_004492606.1| PREDICTED: mediator of RNA polymerase II tra... 143 2e-32
ref|XP_004492605.1| PREDICTED: mediator of RNA polymerase II tra... 143 2e-32
ref|XP_003623670.1| hypothetical protein MTR_7g074290 [Medicago ... 143 3e-32
gb|ESW12022.1| hypothetical protein PHAVU_008G078200g [Phaseolus... 141 1e-31
gb|EMJ07542.1| hypothetical protein PRUPE_ppa017529mg [Prunus pe... 140 2e-31
dbj|BAK03112.1| predicted protein [Hordeum vulgare subsp. vulgare] 140 2e-31
>ref|XP_004305061.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33B-like [Fragaria vesca subsp. vesca]
Length = 1243
Score = 152 bits (384), Expect = 4e-35
Identities = 70/76 (92%), Positives = 76/76 (100%)
Frame = -1
Query: 233 VPAWDILEAVPFVLEAILTACAHGRLSSRDLTTGLRDLVDFLPASLATIISYFSAEITRG 54
+PAW++LEA+PFVLEAILTACAHGRLSSRDLTTGLRDLV+FLPASLATIISYFSAE+TRG
Sbjct: 778 LPAWNVLEAIPFVLEAILTACAHGRLSSRDLTTGLRDLVEFLPASLATIISYFSAEVTRG 837
Query: 53 IWKPVPMNGTDWPSPA 6
IWKPVPMNGTDWPSPA
Sbjct: 838 IWKPVPMNGTDWPSPA 853
>ref|XP_002323105.2| hypothetical protein POPTR_0016s14910g [Populus trichocarpa]
gi|550321539|gb|EEF04866.2| hypothetical protein
POPTR_0016s14910g [Populus trichocarpa]
Length = 1346
Score = 150 bits (379), Expect = 2e-34
Identities = 67/76 (88%), Positives = 75/76 (98%)
Frame = -1
Query: 233 VPAWDILEAVPFVLEAILTACAHGRLSSRDLTTGLRDLVDFLPASLATIISYFSAEITRG 54
+PAWD+LEA+PFVLEAILTACAHGRLSSRDLTTGLRDL+DFLPA+L TI++YF+AEITRG
Sbjct: 885 LPAWDVLEAIPFVLEAILTACAHGRLSSRDLTTGLRDLIDFLPATLGTIVTYFAAEITRG 944
Query: 53 IWKPVPMNGTDWPSPA 6
IWKPVPMNGTDWPSPA
Sbjct: 945 IWKPVPMNGTDWPSPA 960
>gb|EXC35212.1| hypothetical protein L484_022767 [Morus notabilis]
Length = 1321
Score = 149 bits (375), Expect = 5e-34
Identities = 69/77 (89%), Positives = 74/77 (96%)
Frame = -1
Query: 233 VPAWDILEAVPFVLEAILTACAHGRLSSRDLTTGLRDLVDFLPASLATIISYFSAEITRG 54
+PAW++LEA+PFVLEAILTACAHGRLSSRDLTTGLRDLV+FLPASLA IISYFSAEITRG
Sbjct: 856 LPAWEVLEAIPFVLEAILTACAHGRLSSRDLTTGLRDLVEFLPASLAAIISYFSAEITRG 915
Query: 53 IWKPVPMNGTDWPSPAP 3
IWK VPMNG DWPSPAP
Sbjct: 916 IWKSVPMNGNDWPSPAP 932
>tpg|DAA41777.1| TPA: hypothetical protein ZEAMMB73_504046 [Zea mays]
Length = 1290
Score = 147 bits (370), Expect = 2e-33
Identities = 68/75 (90%), Positives = 72/75 (96%)
Frame = -1
Query: 233 VPAWDILEAVPFVLEAILTACAHGRLSSRDLTTGLRDLVDFLPASLATIISYFSAEITRG 54
VPAW+ LEAVPFVLEA+LTACAHGRLSSRDLTT LRDLVDFLPASLA I+SYFSAEITRG
Sbjct: 826 VPAWEFLEAVPFVLEAVLTACAHGRLSSRDLTTSLRDLVDFLPASLAAIVSYFSAEITRG 885
Query: 53 IWKPVPMNGTDWPSP 9
IWKPVPMNGT+WPSP
Sbjct: 886 IWKPVPMNGTEWPSP 900
>ref|XP_002519971.1| conserved hypothetical protein [Ricinus communis]
gi|223540735|gb|EEF42295.1| conserved hypothetical
protein [Ricinus communis]
Length = 1000
Score = 147 bits (370), Expect = 2e-33
Identities = 67/76 (88%), Positives = 73/76 (96%)
Frame = -1
Query: 233 VPAWDILEAVPFVLEAILTACAHGRLSSRDLTTGLRDLVDFLPASLATIISYFSAEITRG 54
+PAW++LEAVPFVLEAILTACAHGRLSSRDLTTGLRDL+DFLPASL IISYF+AE+TRG
Sbjct: 537 LPAWEVLEAVPFVLEAILTACAHGRLSSRDLTTGLRDLIDFLPASLGGIISYFAAEVTRG 596
Query: 53 IWKPVPMNGTDWPSPA 6
WKPVPMNGTDWPSPA
Sbjct: 597 TWKPVPMNGTDWPSPA 612
>ref|XP_004962479.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X5 [Setaria italica]
Length = 1019
Score = 145 bits (366), Expect = 5e-33
Identities = 67/76 (88%), Positives = 72/76 (94%)
Frame = -1
Query: 233 VPAWDILEAVPFVLEAILTACAHGRLSSRDLTTGLRDLVDFLPASLATIISYFSAEITRG 54
VPAW++LEAVPFVLEA+LTACAHGRLSSRDL TGLRDL DFLPASLA I+SYFSAEITRG
Sbjct: 554 VPAWEVLEAVPFVLEAVLTACAHGRLSSRDLVTGLRDLADFLPASLAAIVSYFSAEITRG 613
Query: 53 IWKPVPMNGTDWPSPA 6
IWKPV +NGTDWPSPA
Sbjct: 614 IWKPVMLNGTDWPSPA 629
>ref|XP_004962478.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X4 [Setaria italica]
Length = 1089
Score = 145 bits (366), Expect = 5e-33
Identities = 67/76 (88%), Positives = 72/76 (94%)
Frame = -1
Query: 233 VPAWDILEAVPFVLEAILTACAHGRLSSRDLTTGLRDLVDFLPASLATIISYFSAEITRG 54
VPAW++LEAVPFVLEA+LTACAHGRLSSRDL TGLRDL DFLPASLA I+SYFSAEITRG
Sbjct: 624 VPAWEVLEAVPFVLEAVLTACAHGRLSSRDLVTGLRDLADFLPASLAAIVSYFSAEITRG 683
Query: 53 IWKPVPMNGTDWPSPA 6
IWKPV +NGTDWPSPA
Sbjct: 684 IWKPVMLNGTDWPSPA 699
>ref|XP_004962477.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X3 [Setaria italica]
Length = 1225
Score = 145 bits (366), Expect = 5e-33
Identities = 67/76 (88%), Positives = 72/76 (94%)
Frame = -1
Query: 233 VPAWDILEAVPFVLEAILTACAHGRLSSRDLTTGLRDLVDFLPASLATIISYFSAEITRG 54
VPAW++LEAVPFVLEA+LTACAHGRLSSRDL TGLRDL DFLPASLA I+SYFSAEITRG
Sbjct: 760 VPAWEVLEAVPFVLEAVLTACAHGRLSSRDLVTGLRDLADFLPASLAAIVSYFSAEITRG 819
Query: 53 IWKPVPMNGTDWPSPA 6
IWKPV +NGTDWPSPA
Sbjct: 820 IWKPVMLNGTDWPSPA 835
>ref|XP_004962476.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X2 [Setaria italica]
Length = 1271
Score = 145 bits (366), Expect = 5e-33
Identities = 67/76 (88%), Positives = 72/76 (94%)
Frame = -1
Query: 233 VPAWDILEAVPFVLEAILTACAHGRLSSRDLTTGLRDLVDFLPASLATIISYFSAEITRG 54
VPAW++LEAVPFVLEA+LTACAHGRLSSRDL TGLRDL DFLPASLA I+SYFSAEITRG
Sbjct: 806 VPAWEVLEAVPFVLEAVLTACAHGRLSSRDLVTGLRDLADFLPASLAAIVSYFSAEITRG 865
Query: 53 IWKPVPMNGTDWPSPA 6
IWKPV +NGTDWPSPA
Sbjct: 866 IWKPVMLNGTDWPSPA 881
>ref|XP_004962475.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X1 [Setaria italica]
Length = 1299
Score = 145 bits (366), Expect = 5e-33
Identities = 67/76 (88%), Positives = 72/76 (94%)
Frame = -1
Query: 233 VPAWDILEAVPFVLEAILTACAHGRLSSRDLTTGLRDLVDFLPASLATIISYFSAEITRG 54
VPAW++LEAVPFVLEA+LTACAHGRLSSRDL TGLRDL DFLPASLA I+SYFSAEITRG
Sbjct: 834 VPAWEVLEAVPFVLEAVLTACAHGRLSSRDLVTGLRDLADFLPASLAAIVSYFSAEITRG 893
Query: 53 IWKPVPMNGTDWPSPA 6
IWKPV +NGTDWPSPA
Sbjct: 894 IWKPVMLNGTDWPSPA 909
>ref|XP_004959895.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like [Setaria italica]
Length = 1371
Score = 144 bits (364), Expect = 9e-33
Identities = 67/75 (89%), Positives = 71/75 (94%)
Frame = -1
Query: 233 VPAWDILEAVPFVLEAILTACAHGRLSSRDLTTGLRDLVDFLPASLATIISYFSAEITRG 54
VPAW+ LEAVPFVLEA+LTACAHGRLSSRDLTT LRDLVDFLPASLA I+SYFSAEITRG
Sbjct: 907 VPAWEFLEAVPFVLEAVLTACAHGRLSSRDLTTSLRDLVDFLPASLAAIVSYFSAEITRG 966
Query: 53 IWKPVPMNGTDWPSP 9
IWKPVPMNG +WPSP
Sbjct: 967 IWKPVPMNGIEWPSP 981
>ref|XP_002461223.1| hypothetical protein SORBIDRAFT_02g043150 [Sorghum bicolor]
gi|241924600|gb|EER97744.1| hypothetical protein
SORBIDRAFT_02g043150 [Sorghum bicolor]
Length = 1306
Score = 144 bits (364), Expect = 9e-33
Identities = 67/75 (89%), Positives = 71/75 (94%)
Frame = -1
Query: 233 VPAWDILEAVPFVLEAILTACAHGRLSSRDLTTGLRDLVDFLPASLATIISYFSAEITRG 54
VPAW+ LEAVPFVLEA+LTACAHGRLSSRDLTT LRDLVDFLPASLA I+SYFSAEITRG
Sbjct: 842 VPAWEFLEAVPFVLEAVLTACAHGRLSSRDLTTSLRDLVDFLPASLAAIVSYFSAEITRG 901
Query: 53 IWKPVPMNGTDWPSP 9
IWKPVPMNG +WPSP
Sbjct: 902 IWKPVPMNGIEWPSP 916
>ref|XP_006429661.1| hypothetical protein CICLE_v10010920mg [Citrus clementina]
gi|568855339|ref|XP_006481264.1| PREDICTED: mediator of
RNA polymerase II transcription subunit 33A-like [Citrus
sinensis] gi|557531718|gb|ESR42901.1| hypothetical
protein CICLE_v10010920mg [Citrus clementina]
Length = 1328
Score = 144 bits (363), Expect = 1e-32
Identities = 66/77 (85%), Positives = 75/77 (97%)
Frame = -1
Query: 233 VPAWDILEAVPFVLEAILTACAHGRLSSRDLTTGLRDLVDFLPASLATIISYFSAEITRG 54
+PAW++LEA+PFVLEAIL+ACA+GRLSSRDL TGLR+LVDFLPAS+ATIISYFSAEI+RG
Sbjct: 864 LPAWEVLEAIPFVLEAILSACAYGRLSSRDLITGLRELVDFLPASIATIISYFSAEISRG 923
Query: 53 IWKPVPMNGTDWPSPAP 3
IWK VPMNGTDWPSPAP
Sbjct: 924 IWKAVPMNGTDWPSPAP 940
>ref|XP_006842623.1| hypothetical protein AMTR_s00077p00181380 [Amborella trichopoda]
gi|548844709|gb|ERN04298.1| hypothetical protein
AMTR_s00077p00181380 [Amborella trichopoda]
Length = 1314
Score = 143 bits (361), Expect = 2e-32
Identities = 64/76 (84%), Positives = 73/76 (96%)
Frame = -1
Query: 233 VPAWDILEAVPFVLEAILTACAHGRLSSRDLTTGLRDLVDFLPASLATIISYFSAEITRG 54
+PAW++LEA+PFVLEA+LTACAH +LSSRDLTTGLRDLVDFLPAS+ TIISYFSAE++RG
Sbjct: 845 IPAWEVLEAIPFVLEAVLTACAHRKLSSRDLTTGLRDLVDFLPASIGTIISYFSAEVSRG 904
Query: 53 IWKPVPMNGTDWPSPA 6
IWKPV MNGTDWPSPA
Sbjct: 905 IWKPVAMNGTDWPSPA 920
>ref|XP_004492606.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X2 [Cicer arietinum]
Length = 1263
Score = 143 bits (361), Expect = 2e-32
Identities = 66/76 (86%), Positives = 72/76 (94%)
Frame = -1
Query: 233 VPAWDILEAVPFVLEAILTACAHGRLSSRDLTTGLRDLVDFLPASLATIISYFSAEITRG 54
+PAW++LEA+PFVLEAILTAC HGRLSSRDLTTGLRDLVDFLPASLA II YFS+EITRG
Sbjct: 790 LPAWEVLEALPFVLEAILTACVHGRLSSRDLTTGLRDLVDFLPASLAAIIDYFSSEITRG 849
Query: 53 IWKPVPMNGTDWPSPA 6
+WK VPMNGTDWPSPA
Sbjct: 850 VWKLVPMNGTDWPSPA 865
>ref|XP_004492605.1| PREDICTED: mediator of RNA polymerase II transcription subunit
33A-like isoform X1 [Cicer arietinum]
Length = 1318
Score = 143 bits (361), Expect = 2e-32
Identities = 66/76 (86%), Positives = 72/76 (94%)
Frame = -1
Query: 233 VPAWDILEAVPFVLEAILTACAHGRLSSRDLTTGLRDLVDFLPASLATIISYFSAEITRG 54
+PAW++LEA+PFVLEAILTAC HGRLSSRDLTTGLRDLVDFLPASLA II YFS+EITRG
Sbjct: 845 LPAWEVLEALPFVLEAILTACVHGRLSSRDLTTGLRDLVDFLPASLAAIIDYFSSEITRG 904
Query: 53 IWKPVPMNGTDWPSPA 6
+WK VPMNGTDWPSPA
Sbjct: 905 VWKLVPMNGTDWPSPA 920
>ref|XP_003623670.1| hypothetical protein MTR_7g074290 [Medicago truncatula]
gi|355498685|gb|AES79888.1| hypothetical protein
MTR_7g074290 [Medicago truncatula]
Length = 1320
Score = 143 bits (360), Expect = 3e-32
Identities = 64/76 (84%), Positives = 72/76 (94%)
Frame = -1
Query: 233 VPAWDILEAVPFVLEAILTACAHGRLSSRDLTTGLRDLVDFLPASLATIISYFSAEITRG 54
+PAW++LEA+PFVLEAILTAC HGRLSSRDLTTGLRDLVDFLPAS+A II YFS+E+TRG
Sbjct: 847 LPAWEVLEALPFVLEAILTACVHGRLSSRDLTTGLRDLVDFLPASIAAIIDYFSSEVTRG 906
Query: 53 IWKPVPMNGTDWPSPA 6
+WK VPMNGTDWPSPA
Sbjct: 907 VWKQVPMNGTDWPSPA 922
>gb|ESW12022.1| hypothetical protein PHAVU_008G078200g [Phaseolus vulgaris]
Length = 960
Score = 141 bits (355), Expect = 1e-31
Identities = 63/76 (82%), Positives = 73/76 (96%)
Frame = -1
Query: 233 VPAWDILEAVPFVLEAILTACAHGRLSSRDLTTGLRDLVDFLPASLATIISYFSAEITRG 54
+PAW++LEA+PFVLE+ILTACAHGR+SSR+LTTGLRDLVDFLPASLA II YFS+E+TRG
Sbjct: 853 LPAWEVLEALPFVLESILTACAHGRISSRELTTGLRDLVDFLPASLAAIIDYFSSEVTRG 912
Query: 53 IWKPVPMNGTDWPSPA 6
+WK VPMNGTDWPSPA
Sbjct: 913 VWKLVPMNGTDWPSPA 928
>gb|EMJ07542.1| hypothetical protein PRUPE_ppa017529mg [Prunus persica]
Length = 1316
Score = 140 bits (353), Expect = 2e-31
Identities = 66/76 (86%), Positives = 72/76 (94%)
Frame = -1
Query: 233 VPAWDILEAVPFVLEAILTACAHGRLSSRDLTTGLRDLVDFLPASLATIISYFSAEITRG 54
+PAW+ILEA+PFVLEAILTACA+GRLSSRDLTTGLRDLV+FLPASLA IISYFSAE+TRG
Sbjct: 851 LPAWEILEAIPFVLEAILTACAYGRLSSRDLTTGLRDLVEFLPASLAAIISYFSAEVTRG 910
Query: 53 IWKPVPMNGTDWPSPA 6
IWK V MNG DWPSPA
Sbjct: 911 IWKQVAMNGIDWPSPA 926
>dbj|BAK03112.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1119
Score = 140 bits (353), Expect = 2e-31
Identities = 63/75 (84%), Positives = 72/75 (96%)
Frame = -1
Query: 233 VPAWDILEAVPFVLEAILTACAHGRLSSRDLTTGLRDLVDFLPASLATIISYFSAEITRG 54
+PAW+ILEAVP+VLEA+LTAC+HGR+SSRD+TT LRDLVDFLPASLA I+SYFSAEITRG
Sbjct: 863 LPAWEILEAVPYVLEAVLTACSHGRISSRDMTTSLRDLVDFLPASLAAIVSYFSAEITRG 922
Query: 53 IWKPVPMNGTDWPSP 9
IWK VPMNGT+WPSP
Sbjct: 923 IWKAVPMNGTEWPSP 937