BLASTX nr result
ID: Zingiber23_contig00043376
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Zingiber23_contig00043376
(259 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001159257.1| hypothetical protein [Zea mays] gi|223943049... 101 9e-20
ref|XP_004986615.1| PREDICTED: pentatricopeptide repeat-containi... 101 1e-19
ref|XP_003567327.1| PREDICTED: pentatricopeptide repeat-containi... 97 2e-18
gb|EMT32379.1| Pentatricopeptide repeat-containing protein [Aegi... 97 3e-18
ref|XP_006661785.1| PREDICTED: pentatricopeptide repeat-containi... 94 2e-17
gb|ABB47633.1| expressed protein [Oryza sativa Japonica Group] 92 7e-17
gb|EEE50978.1| hypothetical protein OsJ_31562 [Oryza sativa Japo... 92 7e-17
gb|EEC66969.1| hypothetical protein OsI_33629 [Oryza sativa Indi... 92 7e-17
ref|XP_003631269.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 85 9e-15
emb|CBI28530.3| unnamed protein product [Vitis vinifera] 85 9e-15
gb|EXB38552.1| hypothetical protein L484_008580 [Morus notabilis] 84 2e-14
ref|NP_200945.1| pentatricopeptide repeat-containing protein [Ar... 84 2e-14
ref|XP_002866430.1| hypothetical protein ARALYDRAFT_496296 [Arab... 84 2e-14
gb|AAM65325.1| unknown [Arabidopsis thaliana] 84 2e-14
ref|XP_004508741.1| PREDICTED: pentatricopeptide repeat-containi... 84 3e-14
gb|ESW27283.1| hypothetical protein PHAVU_003G188300g [Phaseolus... 83 4e-14
ref|XP_006280363.1| hypothetical protein CARUB_v10026291mg [Caps... 83 4e-14
ref|XP_006849319.1| hypothetical protein AMTR_s00164p00020970 [A... 82 7e-14
gb|EOY21933.1| Pentatricopeptide repeat superfamily protein [The... 82 7e-14
ref|XP_004138304.1| PREDICTED: pentatricopeptide repeat-containi... 82 7e-14
>ref|NP_001159257.1| hypothetical protein [Zea mays] gi|223943049|gb|ACN25608.1| unknown
[Zea mays] gi|223944973|gb|ACN26570.1| unknown [Zea
mays] gi|414871380|tpg|DAA49937.1| TPA: hypothetical
protein ZEAMMB73_156182 [Zea mays]
gi|414871381|tpg|DAA49938.1| TPA: hypothetical protein
ZEAMMB73_156182 [Zea mays]
Length = 499
Score = 101 bits (252), Expect = 9e-20
Identities = 45/76 (59%), Positives = 60/76 (78%)
Frame = +2
Query: 32 IIQQSLLHGWCVRGDVKEARHVMDEMKSLGFPPTIASYNDLLLCLCQKNVKSNPSALVPE 211
I+++SLLHGWCV G+ KEAR V++EMKS G P + S+N+ L C+C +N+ NPSALVPE
Sbjct: 226 IVERSLLHGWCVHGNAKEARKVLNEMKSSGVPLGLPSFNEFLHCVCHRNLNFNPSALVPE 285
Query: 212 ATNLMTEMRTSGVPAA 259
A +++TEMRT GVP A
Sbjct: 286 AMDILTEMRTCGVPPA 301
>ref|XP_004986615.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61370,
mitochondrial-like [Setaria italica]
Length = 670
Score = 101 bits (251), Expect = 1e-19
Identities = 47/77 (61%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
Frame = +2
Query: 32 IIQQSLLHGWCVRGDVKEARHVMDEMKSLGFPPTIASYNDLLLCLCQKNVKSNPSALVPE 211
I+++SLLHGWCV G+ KEAR V+DEMKS G P + S+ND L C+C +N+K NPSALVPE
Sbjct: 221 IVERSLLHGWCVHGNAKEARRVLDEMKSAGVPLGLPSFNDFLHCVCHRNLKFNPSALVPE 280
Query: 212 ATNLMTEMRTSGV-PAA 259
A +++ EMR+ GV PAA
Sbjct: 281 AMDILAEMRSYGVAPAA 297
>ref|XP_003567327.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61370,
mitochondrial-like [Brachypodium distachyon]
Length = 676
Score = 97.1 bits (240), Expect = 2e-18
Identities = 45/77 (58%), Positives = 61/77 (79%), Gaps = 1/77 (1%)
Frame = +2
Query: 32 IIQQSLLHGWCVRGDVKEARHVMDEMKSLGFPPTIASYNDLLLCLCQKNVKSNPSALVPE 211
I+Q++LLHGWCV G+ KEAR V+D++KS G P + S+ND L C+C +N+K N SALVPE
Sbjct: 228 IVQRTLLHGWCVHGNAKEARRVLDDIKSSGCPVGLPSFNDFLNCVCHRNLKFNASALVPE 287
Query: 212 ATNLMTEMRTSGV-PAA 259
A +++TEMR+ GV PAA
Sbjct: 288 AMDILTEMRSYGVTPAA 304
>gb|EMT32379.1| Pentatricopeptide repeat-containing protein [Aegilops tauschii]
Length = 706
Score = 96.7 bits (239), Expect = 3e-18
Identities = 43/73 (58%), Positives = 58/73 (79%)
Frame = +2
Query: 32 IIQQSLLHGWCVRGDVKEARHVMDEMKSLGFPPTIASYNDLLLCLCQKNVKSNPSALVPE 211
I+Q+SLLHGWCV G+ KEAR V+D++KS G P + S+ND L C+C +N+K NPSALV E
Sbjct: 230 IVQRSLLHGWCVHGNAKEARRVLDDIKSSGCPLGLPSFNDFLNCVCHRNLKFNPSALVSE 289
Query: 212 ATNLMTEMRTSGV 250
A +++TEMR+ GV
Sbjct: 290 AMDILTEMRSYGV 302
>ref|XP_006661785.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61370,
mitochondrial-like [Oryza brachyantha]
Length = 666
Score = 94.0 bits (232), Expect = 2e-17
Identities = 42/73 (57%), Positives = 57/73 (78%)
Frame = +2
Query: 32 IIQQSLLHGWCVRGDVKEARHVMDEMKSLGFPPTIASYNDLLLCLCQKNVKSNPSALVPE 211
I+Q+SLLHGWCV G+ KEAR V+D++KS P + S+ND + CLC +N+K NPSALVPE
Sbjct: 217 IVQRSLLHGWCVHGNAKEARRVLDDIKSSCSPLGLPSFNDYMHCLCHRNLKFNPSALVPE 276
Query: 212 ATNLMTEMRTSGV 250
A +++ EMR+ GV
Sbjct: 277 AMDVLAEMRSYGV 289
>gb|ABB47633.1| expressed protein [Oryza sativa Japonica Group]
Length = 658
Score = 92.0 bits (227), Expect = 7e-17
Identities = 42/73 (57%), Positives = 57/73 (78%)
Frame = +2
Query: 32 IIQQSLLHGWCVRGDVKEARHVMDEMKSLGFPPTIASYNDLLLCLCQKNVKSNPSALVPE 211
I+Q+SLLHGWCV G+ KEAR V+D++KS P + S+ND L CLC +N+K NPSALV E
Sbjct: 209 IVQRSLLHGWCVHGNAKEARRVLDDIKSSCTPLGLPSFNDYLHCLCHRNLKFNPSALVTE 268
Query: 212 ATNLMTEMRTSGV 250
A ++++EMR+ GV
Sbjct: 269 AMDVLSEMRSYGV 281
>gb|EEE50978.1| hypothetical protein OsJ_31562 [Oryza sativa Japonica Group]
Length = 648
Score = 92.0 bits (227), Expect = 7e-17
Identities = 42/73 (57%), Positives = 57/73 (78%)
Frame = +2
Query: 32 IIQQSLLHGWCVRGDVKEARHVMDEMKSLGFPPTIASYNDLLLCLCQKNVKSNPSALVPE 211
I+Q+SLLHGWCV G+ KEAR V+D++KS P + S+ND L CLC +N+K NPSALV E
Sbjct: 209 IVQRSLLHGWCVHGNAKEARRVLDDIKSSCTPLGLPSFNDYLHCLCHRNLKFNPSALVTE 268
Query: 212 ATNLMTEMRTSGV 250
A ++++EMR+ GV
Sbjct: 269 AMDVLSEMRSYGV 281
>gb|EEC66969.1| hypothetical protein OsI_33629 [Oryza sativa Indica Group]
Length = 648
Score = 92.0 bits (227), Expect = 7e-17
Identities = 42/73 (57%), Positives = 57/73 (78%)
Frame = +2
Query: 32 IIQQSLLHGWCVRGDVKEARHVMDEMKSLGFPPTIASYNDLLLCLCQKNVKSNPSALVPE 211
I+Q+SLLHGWCV G+ KEAR V+D++KS P + S+ND L CLC +N+K NPSALV E
Sbjct: 209 IVQRSLLHGWCVHGNAKEARRVLDDIKSSCTPLGLPSFNDYLHCLCHRNLKFNPSALVTE 268
Query: 212 ATNLMTEMRTSGV 250
A ++++EMR+ GV
Sbjct: 269 AMDVLSEMRSYGV 281
>ref|XP_003631269.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g61370, mitochondrial-like [Vitis vinifera]
Length = 505
Score = 85.1 bits (209), Expect = 9e-15
Identities = 38/72 (52%), Positives = 53/72 (73%)
Frame = +2
Query: 35 IQQSLLHGWCVRGDVKEARHVMDEMKSLGFPPTIASYNDLLLCLCQKNVKSNPSALVPEA 214
I +SL +GW + +VKEAR ++ EMKS+G P + YN L CLC++N+KSNPS LVPEA
Sbjct: 213 IYRSLFYGWSEQKNVKEARRILKEMKSVGIMPDLFCYNTFLRCLCERNLKSNPSGLVPEA 272
Query: 215 TNLMTEMRTSGV 250
N+M EMR++ +
Sbjct: 273 LNVMMEMRSNRI 284
>emb|CBI28530.3| unnamed protein product [Vitis vinifera]
Length = 452
Score = 85.1 bits (209), Expect = 9e-15
Identities = 38/72 (52%), Positives = 53/72 (73%)
Frame = +2
Query: 35 IQQSLLHGWCVRGDVKEARHVMDEMKSLGFPPTIASYNDLLLCLCQKNVKSNPSALVPEA 214
I +SL +GW + +VKEAR ++ EMKS+G P + YN L CLC++N+KSNPS LVPEA
Sbjct: 182 IYRSLFYGWSEQKNVKEARRILKEMKSVGIMPDLFCYNTFLRCLCERNLKSNPSGLVPEA 241
Query: 215 TNLMTEMRTSGV 250
N+M EMR++ +
Sbjct: 242 LNVMMEMRSNRI 253
>gb|EXB38552.1| hypothetical protein L484_008580 [Morus notabilis]
Length = 518
Score = 84.3 bits (207), Expect = 2e-14
Identities = 39/71 (54%), Positives = 51/71 (71%)
Frame = +2
Query: 29 RIIQQSLLHGWCVRGDVKEARHVMDEMKSLGFPPTIASYNDLLLCLCQKNVKSNPSALVP 208
R I +SLL+GW + +VKEAR ++ EMKS G P + YN L CLC++N+K NPS LVP
Sbjct: 210 RCIYRSLLYGWSEQENVKEARRIIKEMKSAGINPDLFCYNTFLRCLCERNLKRNPSGLVP 269
Query: 209 EATNLMTEMRT 241
EA N+M EMR+
Sbjct: 270 EALNVMMEMRS 280
>ref|NP_200945.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171474|sp|Q9FLJ6.1|PP439_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At5g61370, mitochondrial; Flags: Precursor
gi|9757858|dbj|BAB08492.1| unnamed protein product
[Arabidopsis thaliana] gi|17529064|gb|AAL38742.1|
unknown protein [Arabidopsis thaliana]
gi|23296891|gb|AAN13197.1| unknown protein [Arabidopsis
thaliana] gi|332010076|gb|AED97459.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 487
Score = 84.0 bits (206), Expect = 2e-14
Identities = 38/69 (55%), Positives = 50/69 (72%)
Frame = +2
Query: 35 IQQSLLHGWCVRGDVKEARHVMDEMKSLGFPPTIASYNDLLLCLCQKNVKSNPSALVPEA 214
+ +SLL GW V+ +VKEAR V+ +MKS G P + +N LL CLC++NV NPS LVPEA
Sbjct: 210 VYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEA 269
Query: 215 TNLMTEMRT 241
N+M EMR+
Sbjct: 270 LNIMLEMRS 278
>ref|XP_002866430.1| hypothetical protein ARALYDRAFT_496296 [Arabidopsis lyrata subsp.
lyrata] gi|297312265|gb|EFH42689.1| hypothetical protein
ARALYDRAFT_496296 [Arabidopsis lyrata subsp. lyrata]
Length = 489
Score = 84.0 bits (206), Expect = 2e-14
Identities = 38/69 (55%), Positives = 50/69 (72%)
Frame = +2
Query: 35 IQQSLLHGWCVRGDVKEARHVMDEMKSLGFPPTIASYNDLLLCLCQKNVKSNPSALVPEA 214
+ +SLL GW V+ +VKEAR V+ +MKS G P + +N LL CLC++NV NPS LVPEA
Sbjct: 212 VYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEA 271
Query: 215 TNLMTEMRT 241
N+M EMR+
Sbjct: 272 LNIMLEMRS 280
>gb|AAM65325.1| unknown [Arabidopsis thaliana]
Length = 487
Score = 84.0 bits (206), Expect = 2e-14
Identities = 38/69 (55%), Positives = 50/69 (72%)
Frame = +2
Query: 35 IQQSLLHGWCVRGDVKEARHVMDEMKSLGFPPTIASYNDLLLCLCQKNVKSNPSALVPEA 214
+ +SLL GW V+ +VKEAR V+ +MKS G P + +N LL CLC++NV NPS LVPEA
Sbjct: 210 VYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEA 269
Query: 215 TNLMTEMRT 241
N+M EMR+
Sbjct: 270 LNIMLEMRS 278
>ref|XP_004508741.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690-like
[Cicer arietinum]
Length = 1253
Score = 83.6 bits (205), Expect = 3e-14
Identities = 38/68 (55%), Positives = 50/68 (73%)
Frame = +2
Query: 35 IQQSLLHGWCVRGDVKEARHVMDEMKSLGFPPTIASYNDLLLCLCQKNVKSNPSALVPEA 214
I +SLL+GW V+ +VKEAR ++ EMKS G P + YN L CLC++N++ NPS LVPEA
Sbjct: 976 IYRSLLYGWSVQRNVKEARRIIQEMKSNGVNPDLVCYNTFLRCLCERNLRHNPSGLVPEA 1035
Query: 215 TNLMTEMR 238
N+M EMR
Sbjct: 1036 LNVMMEMR 1043
>gb|ESW27283.1| hypothetical protein PHAVU_003G188300g [Phaseolus vulgaris]
Length = 494
Score = 82.8 bits (203), Expect = 4e-14
Identities = 38/72 (52%), Positives = 52/72 (72%)
Frame = +2
Query: 35 IQQSLLHGWCVRGDVKEARHVMDEMKSLGFPPTIASYNDLLLCLCQKNVKSNPSALVPEA 214
I +SLL+GW V+ +VKEAR ++ EMK+ G P + YN L CLC++N++ NPS LVPEA
Sbjct: 219 IYRSLLYGWSVQRNVKEARRIIKEMKANGVTPDLLCYNTFLRCLCERNLRHNPSGLVPEA 278
Query: 215 TNLMTEMRTSGV 250
N+M EMR+ V
Sbjct: 279 LNVMMEMRSCRV 290
>ref|XP_006280363.1| hypothetical protein CARUB_v10026291mg [Capsella rubella]
gi|482549067|gb|EOA13261.1| hypothetical protein
CARUB_v10026291mg [Capsella rubella]
Length = 490
Score = 82.8 bits (203), Expect = 4e-14
Identities = 37/69 (53%), Positives = 50/69 (72%)
Frame = +2
Query: 35 IQQSLLHGWCVRGDVKEARHVMDEMKSLGFPPTIASYNDLLLCLCQKNVKSNPSALVPEA 214
+ +SLL GW V+ +VKEAR V+ +MKS G P + +N LL CLC++NV NPS LVPEA
Sbjct: 213 VYRSLLFGWSVQRNVKEARRVIQDMKSAGITPDLFCFNSLLTCLCERNVNRNPSGLVPEA 272
Query: 215 TNLMTEMRT 241
N+M EM++
Sbjct: 273 LNIMLEMKS 281
>ref|XP_006849319.1| hypothetical protein AMTR_s00164p00020970 [Amborella trichopoda]
gi|548852840|gb|ERN10900.1| hypothetical protein
AMTR_s00164p00020970 [Amborella trichopoda]
Length = 459
Score = 82.0 bits (201), Expect = 7e-14
Identities = 33/69 (47%), Positives = 52/69 (75%)
Frame = +2
Query: 44 SLLHGWCVRGDVKEARHVMDEMKSLGFPPTIASYNDLLLCLCQKNVKSNPSALVPEATNL 223
+L+HGWC++G+ K+AR V +EM+S GF P + +Y+ L+ C+C KN++ NPSALV + L
Sbjct: 199 TLIHGWCIKGEFKDARRVFEEMRSNGFSPNLVAYHSLIRCVCAKNLRINPSALVRDFFEL 258
Query: 224 MTEMRTSGV 250
+ EMR++ V
Sbjct: 259 VMEMRSNSV 267
>gb|EOY21933.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
Length = 487
Score = 82.0 bits (201), Expect = 7e-14
Identities = 40/72 (55%), Positives = 49/72 (68%)
Frame = +2
Query: 35 IQQSLLHGWCVRGDVKEARHVMDEMKSLGFPPTIASYNDLLLCLCQKNVKSNPSALVPEA 214
I + LL+GW V+ +VKEAR V+ EMKS GF + YN L CLC KN K NPS LVPEA
Sbjct: 213 IYRCLLYGWSVQENVKEARRVIKEMKSAGFELDLYCYNTFLRCLCGKNAKRNPSGLVPEA 272
Query: 215 TNLMTEMRTSGV 250
N+M EMR+ +
Sbjct: 273 LNVMMEMRSQRI 284
>ref|XP_004138304.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61370,
mitochondrial-like [Cucumis sativus]
gi|449477571|ref|XP_004155060.1| PREDICTED:
pentatricopeptide repeat-containing protein At5g61370,
mitochondrial-like [Cucumis sativus]
Length = 487
Score = 82.0 bits (201), Expect = 7e-14
Identities = 37/69 (53%), Positives = 50/69 (72%)
Frame = +2
Query: 35 IQQSLLHGWCVRGDVKEARHVMDEMKSLGFPPTIASYNDLLLCLCQKNVKSNPSALVPEA 214
I +SLL+GW ++ + KEAR ++ EMKS G P + YN L CLC+KNV+ NPS LVPE+
Sbjct: 223 IYRSLLYGWSIKKNTKEARRILKEMKSDGTMPDLFCYNTFLKCLCEKNVEKNPSGLVPES 282
Query: 215 TNLMTEMRT 241
N+M EMR+
Sbjct: 283 LNVMMEMRS 291