BLASTX nr result

ID: Zingiber23_contig00043228 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Zingiber23_contig00043228
         (291 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADI18282.1| hypothetical protein [uncultured Chromatiales bac...    79   6e-13
ref|WP_005514638.1| hypothetical protein [Vibrio mimicus] gi|258...    65   9e-09

>gb|ADI18282.1| hypothetical protein [uncultured Chromatiales bacterium
           HF0200_41F04]
          Length = 89

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 48/84 (57%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
 Frame = +2

Query: 2   SRVLSNALGYSPRPPVSVWGTDSFCLKLRDFSWKHGINHFVSKE-TRHHASDNHSG-FA* 175
           +RVLS+ALGYSP PPVSVWGT +F LKLR FSWK GINHF  K+  RH  S   S  F  
Sbjct: 6   TRVLSSALGYSPCPPVSVWGTVTFYLKLRGFSWKQGINHFGPKKGPRHRISGLLSRIFLR 65

Query: 176 SALLCA*TTIQQVAGLTFSVLPSQ 247
               C        A LTFSV PSQ
Sbjct: 66  ELPTCLNRDNHHPADLTFSVTPSQ 89


>ref|WP_005514638.1| hypothetical protein [Vibrio mimicus] gi|258583990|gb|EEW08769.1|
           hypothetical protein VMD_37440 [Vibrio mimicus VM573]
          Length = 104

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 31/50 (62%), Positives = 36/50 (72%)
 Frame = +2

Query: 2   SRVLSNALGYSPRPPVSVWGTDSFCLKLRDFSWKHGINHFVSKETRHHAS 151
           +RVLS+AL +S RPPVSVWGT  + LKLR FSWKHGIN F +   R   S
Sbjct: 47  TRVLSSALVFSTRPPVSVWGTIPYNLKLRGFSWKHGINDFTTVVARRRVS 96


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